Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:37:06 (17273): wrapper (7.7.26015): starting
12:37:06 (17273): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 12:37:06] Arguments: --nthreads 12
[2025-11-23 12:37:06] Threads: 12
[2025-11-23 12:37:06] Checking for CVMFS
[2025-11-23 12:37:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 12:37:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 12:37:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 12:37:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 12:37:06] 2.11.2.0 25590 184352 90352 153216 3 82 12992013 20275201 1 130560 2 97338645 99.967 7333152 25475 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 12:37:06] CVMFS is ok
[2025-11-23 12:37:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 12:37:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 12:37:07] Further information can be found at the LHC@home message board.
[2025-11-23 12:37:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 12:37:07] Checking for apptainer binary...
[2025-11-23 12:37:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 12:37:07] Running /usr/bin/apptainer --version
[2025-11-23 12:37:07] apptainer version 1.3.2-1.el7
[2025-11-23 12:37:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 12:37:08] c-205-24.aglt2.org
[2025-11-23 12:37:08] apptainer works
[2025-11-23 12:37:08] Set ATHENA_PROC_NUMBER=12
[2025-11-23 12:37:08] Set ATHENA_CORE_NUMBER=12
[2025-11-23 12:37:08] Starting ATLAS job with PandaID=6895335047
[2025-11-23 12:37:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 19:48:23]  *** The last 200 lines of the pilot log: ***
[2025-11-23 19:48:23] 2025-11-24 00:48:00,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 19:48:23] 2025-11-24 00:48:00,942 | INFO     | time since job start (25837s) is within the limit (172800.0s)
[2025-11-23 19:48:23] 2025-11-24 00:48:02,947 | INFO     | time since job start (25839s) is within the limit (172800.0s)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,029 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 19:48:23] 2025-11-24 00:48:03,034 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-23 19:48:23] 2025-11-24 00:48:03,037 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895335047/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,038 | INFO     | extracted standard info from prmon json
[2025-11-23 19:48:23] 2025-11-24 00:48:03,038 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 19:48:23] 2025-11-24 00:48:03,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 19:48:23] 2025-11-24 00:48:03,046 | INFO     | fitting pss+swap vs Time
[2025-11-23 19:48:23] 2025-11-24 00:48:03,046 | INFO     | sum of square deviations: 23469189847.990646
[2025-11-23 19:48:23] 2025-11-24 00:48:03,050 | INFO     | sum of deviations: 388592567583.4586
[2025-11-23 19:48:23] 2025-11-24 00:48:03,050 | INFO     | mean x: 1763932344.217494
[2025-11-23 19:48:23] 2025-11-24 00:48:03,051 | INFO     | mean y: 3434087.451536643
[2025-11-23 19:48:23] 2025-11-24 00:48:03,051 | INFO     | intersect: -29202985184.906567
[2025-11-23 19:48:23] 2025-11-24 00:48:03,051 | INFO     | chi2: 5.3135782067427275
[2025-11-23 19:48:23] 2025-11-24 00:48:03,052 | INFO     | sum of square deviations: 22646774580.251144
[2025-11-23 19:48:23] 2025-11-24 00:48:03,056 | INFO     | sum of deviations: 532284025535.68604
[2025-11-23 19:48:23] 2025-11-24 00:48:03,056 | INFO     | mean x: 1763932191.7200956
[2025-11-23 19:48:23] 2025-11-24 00:48:03,057 | INFO     | mean y: 3460692.8349282295
[2025-11-23 19:48:23] 2025-11-24 00:48:03,057 | INFO     | intersect: -41455552574.31377
[2025-11-23 19:48:23] 2025-11-24 00:48:03,057 | INFO     | chi2: 2.8282082503875037
[2025-11-23 19:48:23] 2025-11-24 00:48:03,057 | INFO     | current chi2=2.8282082503875037 (change=46.77394139416983 %)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,058 | INFO     | sum of square deviations: 21843776160.949192
[2025-11-23 19:48:23] 2025-11-24 00:48:03,061 | INFO     | sum of deviations: 561495957486.0339
[2025-11-23 19:48:23] 2025-11-24 00:48:03,062 | INFO     | mean x: 1763932039.220339
[2025-11-23 19:48:23] 2025-11-24 00:48:03,062 | INFO     | mean y: 3466200.329297821
[2025-11-23 19:48:23] 2025-11-24 00:48:03,062 | INFO     | intersect: -45338543441.43579
[2025-11-23 19:48:23] 2025-11-24 00:48:03,062 | INFO     | chi2: 2.5286537282091057
[2025-11-23 19:48:23] 2025-11-24 00:48:03,062 | INFO     | current chi2=2.5286537282091057 (change=10.591671321846786 %)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,063 | INFO     | right removable region: 412
[2025-11-23 19:48:23] 2025-11-24 00:48:03,063 | INFO     | sum of square deviations: 22646718460.251163
[2025-11-23 19:48:23] 2025-11-24 00:48:03,067 | INFO     | sum of deviations: 245925062616.35138
[2025-11-23 19:48:23] 2025-11-24 00:48:03,067 | INFO     | mean x: 1763932496.7200956
[2025-11-23 19:48:23] 2025-11-24 00:48:03,067 | INFO     | mean y: 3460464.2081339713
[2025-11-23 19:48:23] 2025-11-24 00:48:03,067 | INFO     | intersect: -19151421090.41051
[2025-11-23 19:48:23] 2025-11-24 00:48:03,067 | INFO     | chi2: 2.929990954557215
[2025-11-23 19:48:23] 2025-11-24 00:48:03,068 | INFO     | current chi2=2.929990954557215 (change=44.858420436172956 %)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,068 | INFO     | sum of square deviations: 21843689297.50594
[2025-11-23 19:48:23] 2025-11-24 00:48:03,072 | INFO     | sum of deviations: 212542929866.51578
[2025-11-23 19:48:23] 2025-11-24 00:48:03,072 | INFO     | mean x: 1763932649.2227602
[2025-11-23 19:48:23] 2025-11-24 00:48:03,072 | INFO     | mean y: 3466797.1791767552
[2025-11-23 19:48:23] 2025-11-24 00:48:03,072 | INFO     | intersect: -17159907404.257439
[2025-11-23 19:48:23] 2025-11-24 00:48:03,073 | INFO     | chi2: 2.87151400779324
[2025-11-23 19:48:23] 2025-11-24 00:48:03,073 | INFO     | current chi2=2.87151400779324 (change=1.995806392269634 %)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,073 | INFO     | left removable region: 20
[2025-11-23 19:48:23] 2025-11-24 00:48:03,073 | INFO     | sum of square deviations: 18678200800.24498
[2025-11-23 19:48:23] 2025-11-24 00:48:03,077 | INFO     | sum of deviations: 343013947885.8469
[2025-11-23 19:48:23] 2025-11-24 00:48:03,077 | INFO     | mean x: 1763932618.7244897
[2025-11-23 19:48:23] 2025-11-24 00:48:03,077 | INFO     | mean y: 3508497.6096938774
[2025-11-23 19:48:23] 2025-11-24 00:48:03,077 | INFO     | intersect: -32390055412.752155
[2025-11-23 19:48:23] 2025-11-24 00:48:03,077 | INFO     | chi2: 0.04273143167576247
[2025-11-23 19:48:23] 2025-11-24 00:48:03,078 | INFO     | current memory leak: 18.36 B/s (using 392 data points, chi2=0.04)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,078 | INFO     | could have reported an average CPU frequency of 2399 MHz (18 samples)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,078 | INFO     | ..............................
[2025-11-23 19:48:23] 2025-11-24 00:48:03,078 | INFO     | . Timing measurements:
[2025-11-23 19:48:23] 2025-11-24 00:48:03,078 | INFO     | . get job = 0 s
[2025-11-23 19:48:23] 2025-11-24 00:48:03,079 | INFO     | . initial setup = 2 s
[2025-11-23 19:48:23] 2025-11-24 00:48:03,079 | INFO     | . payload setup = 7 s
[2025-11-23 19:48:23] 2025-11-24 00:48:03,079 | INFO     | . stage-in = 0 s
[2025-11-23 19:48:23] 2025-11-24 00:48:03,079 | INFO     | . payload execution = 25800 s
[2025-11-23 19:48:23] 2025-11-24 00:48:03,079 | INFO     | . stage-out = 3 s
[2025-11-23 19:48:23] 2025-11-24 00:48:03,079 | INFO     | . log creation = 0 s
[2025-11-23 19:48:23] 2025-11-24 00:48:03,079 | INFO     | ..............................
[2025-11-23 19:48:23] 2025-11-24 00:48:03,161 | INFO     | 
[2025-11-23 19:48:23] 2025-11-24 00:48:03,162 | INFO     | job summary report
[2025-11-23 19:48:23] 2025-11-24 00:48:03,162 | INFO     | --------------------------------------------------
[2025-11-23 19:48:23] 2025-11-24 00:48:03,162 | INFO     | PanDA job id: 6895335047
[2025-11-23 19:48:23] 2025-11-24 00:48:03,162 | INFO     | task id: 47556137
[2025-11-23 19:48:23] 2025-11-24 00:48:03,162 | INFO     | errors: (none)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,162 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 19:48:23] 2025-11-24 00:48:03,163 | INFO     | pilot state: finished 
[2025-11-23 19:48:23] 2025-11-24 00:48:03,163 | INFO     | transexitcode: 0
[2025-11-23 19:48:23] 2025-11-24 00:48:03,163 | INFO     | exeerrorcode: 0
[2025-11-23 19:48:23] 2025-11-24 00:48:03,163 | INFO     | exeerrordiag: 
[2025-11-23 19:48:23] 2025-11-24 00:48:03,163 | INFO     | exitcode: 0
[2025-11-23 19:48:23] 2025-11-24 00:48:03,163 | INFO     | exitmsg: OK
[2025-11-23 19:48:23] 2025-11-24 00:48:03,164 | INFO     | cpuconsumptiontime: 296539 s
[2025-11-23 19:48:23] 2025-11-24 00:48:03,164 | INFO     | nevents: 1000
[2025-11-23 19:48:23] 2025-11-24 00:48:03,164 | INFO     | neventsw: 0
[2025-11-23 19:48:23] 2025-11-24 00:48:03,164 | INFO     | pid: 27337
[2025-11-23 19:48:23] 2025-11-24 00:48:03,164 | INFO     | pgrp: 27337
[2025-11-23 19:48:23] 2025-11-24 00:48:03,164 | INFO     | corecount: 12
[2025-11-23 19:48:23] 2025-11-24 00:48:03,164 | INFO     | event service: False
[2025-11-23 19:48:23] 2025-11-24 00:48:03,165 | INFO     | sizes: {0: 2298756, 5: 2299018, 11: 2299074, 25811: 2336312, 25812: 2336311, 25815: 2345361, 25818: 2345545, 25823: 2345791}
[2025-11-23 19:48:23] 2025-11-24 00:48:03,165 | INFO     | --------------------------------------------------
[2025-11-23 19:48:23] 2025-11-24 00:48:03,165 | INFO     | 
[2025-11-23 19:48:23] 2025-11-24 00:48:03,165 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 19:48:23] 2025-11-24 00:48:03,217 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,217 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,217 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,217 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,220 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 19:48:23] 2025-11-24 00:48:03,220 | INFO     | job 6895335047 has completed (purged errors)
[2025-11-23 19:48:23] 2025-11-24 00:48:03,220 | INFO     | overall cleanup function is called
[2025-11-23 19:48:23] 2025-11-24 00:48:04,237 | INFO     | --- collectZombieJob: --- 10, [27337]
[2025-11-23 19:48:23] 2025-11-24 00:48:04,237 | INFO     | zombie collector waiting for pid 27337
[2025-11-23 19:48:23] 2025-11-24 00:48:04,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 19:48:23] 2025-11-24 00:48:04,238 | INFO     | collected zombie processes
[2025-11-23 19:48:23] 2025-11-24 00:48:04,238 | INFO     | will attempt to kill all subprocesses of pid=27337
[2025-11-23 19:48:23] 2025-11-24 00:48:04,331 | INFO     | process IDs to be killed: [27337] (in reverse order)
[2025-11-23 19:48:23] 2025-11-24 00:48:04,381 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 19:48:23] 2025-11-24 00:48:04,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 19:48:23] 2025-11-24 00:48:04,386 | INFO     | did not find any defunct processes belonging to 27337
[2025-11-23 19:48:23] 2025-11-24 00:48:04,389 | INFO     | did not find any defunct processes belonging to 27337
[2025-11-23 19:48:23] 2025-11-24 00:48:04,391 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 19:48:23] 2025-11-24 00:48:04,391 | INFO     | ready for new job
[2025-11-23 19:48:23] 2025-11-24 00:48:04,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 19:48:23] 2025-11-24 00:48:04,394 | INFO     | ***************************************
[2025-11-23 19:48:23] 2025-11-24 00:48:04,394 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 19:48:23] 2025-11-24 00:48:04,394 | INFO     | ***************************************
[2025-11-23 19:48:23] 2025-11-24 00:48:04,394 | INFO     | 
[2025-11-23 19:48:23] 2025-11-24 00:48:04,395 | INFO     | architecture information:
[2025-11-23 19:48:23] 2025-11-24 00:48:04,395 | INFO     | executing command: cat /etc/os-release
[2025-11-23 19:48:23] 2025-11-24 00:48:04,410 | INFO     | cat /etc/os-release:
[2025-11-23 19:48:23] NAME="CentOS Linux"
[2025-11-23 19:48:23] VERSION="7 (Core)"
[2025-11-23 19:48:23] ID="centos"
[2025-11-23 19:48:23] ID_LIKE="rhel fedora"
[2025-11-23 19:48:23] VERSION_ID="7"
[2025-11-23 19:48:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 19:48:23] ANSI_COLOR="0;31"
[2025-11-23 19:48:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 19:48:23] HOME_URL="https://www.centos.org/"
[2025-11-23 19:48:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 19:48:23] 
[2025-11-23 19:48:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 19:48:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 19:48:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 19:48:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 19:48:23] 
[2025-11-23 19:48:23] 2025-11-24 00:48:04,411 | INFO     | ***************************************
[2025-11-23 19:48:23] 2025-11-24 00:48:04,914 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 19:48:23] 2025-11-24 00:48:04,930 | INFO     | sufficient remaining disk space (28241297408 B)
[2025-11-23 19:48:23] 2025-11-24 00:48:04,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 19:48:23] 2025-11-24 00:48:04,931 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 19:48:23] 2025-11-24 00:48:04,931 | INFO     | update_server=False
[2025-11-23 19:48:23] 2025-11-24 00:48:04,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 19:48:23] 2025-11-24 00:48:04,931 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 19:48:23] 2025-11-24 00:48:04,932 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 19:48:23] 2025-11-24 00:48:04,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:48:23] 2025-11-24 00:48:04,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 19:48:23] 2025-11-24 00:48:04,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 19:48:23] 2025-11-24 00:48:04,935 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:48:23] 2025-11-24 00:48:04,935 | INFO     | aborting loop
[2025-11-23 19:48:23] 2025-11-24 00:48:05,278 | INFO     | [monitor] cgroup control has ended
[2025-11-23 19:48:23] 2025-11-24 00:48:05,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 19:48:23] 2025-11-24 00:48:05,591 | INFO     | all payload control threads have been joined
[2025-11-23 19:48:23] 2025-11-24 00:48:05,669 | INFO     | all data control threads have been joined
[2025-11-23 19:48:23] 2025-11-24 00:48:05,786 | INFO     | all job control threads have been joined
[2025-11-23 19:48:23] 2025-11-24 00:48:05,936 | INFO     | [job] retrieve thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:05,939 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:05,940 | INFO     | [job] queue monitor thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:05,941 | INFO     | [job] job monitor thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:06,277 | INFO     | [job] validate thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:06,298 | INFO     | [data] copytool_in thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:06,595 | INFO     | [payload] control thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:06,674 | INFO     | [data] control thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:06,787 | INFO     | [job] control thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:06,934 | INFO     | [payload] validate_post thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:07,020 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:07,099 | INFO     | [payload] failed_post thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:07,182 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:07,451 | INFO     | [data] copytool_out thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:08,035 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 19:48:23] 2025-11-24 00:48:12,041 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:15,968 | INFO     | job.realtimelogging is not enabled
[2025-11-23 19:48:23] 2025-11-24 00:48:16,973 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 19:48:23] 2025-11-24 00:48:18,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013613213504)>', '<ExcThread(monitor, started 140013031380736)>']
[2025-11-23 19:48:23] 2025-11-24 00:48:19,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 19:48:23] 2025-11-24 00:48:19,004 | INFO     | [monitor] control thread has ended
[2025-11-23 19:48:23] 2025-11-24 00:48:23,470 | INFO     | all workflow threads have been joined
[2025-11-23 19:48:23] 2025-11-24 00:48:23,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 19:48:23] 2025-11-24 00:48:23,474 | INFO     | traces error code: 0
[2025-11-23 19:48:23] 2025-11-24 00:48:23,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 19:48:23] 2025-11-24 00:48:23,573 [wrapper] ==== pilot stdout END ====
[2025-11-23 19:48:23] 2025-11-24 00:48:23,577 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 19:48:23] 2025-11-24 00:48:23,581 [wrapper] pilotpid: 20958
[2025-11-23 19:48:23] 2025-11-24 00:48:23,585 [wrapper] Pilot exit status: 0
[2025-11-23 19:48:23] 2025-11-24 00:48:23,601 [wrapper] pandaids: 6895335047
[2025-11-23 19:48:23] 2025-11-24 00:48:23,642 [wrapper] cleanup supervisor_pilot 15142 20959
[2025-11-23 19:48:23] 2025-11-24 00:48:23,646 [wrapper] Test setup, not cleaning
[2025-11-23 19:48:23] 2025-11-24 00:48:23,650 [wrapper] apfmon messages muted
[2025-11-23 19:48:23] 2025-11-24 00:48:23,654 [wrapper] ==== wrapper stdout END ====
[2025-11-23 19:48:23] 2025-11-24 00:48:23,658 [wrapper] ==== wrapper stderr END ====
[2025-11-23 19:48:23]  *** Error codes and diagnostics ***
[2025-11-23 19:48:23]     "exeErrorCode": 0,
[2025-11-23 19:48:23]     "exeErrorDiag": "",
[2025-11-23 19:48:23]     "pilotErrorCode": 0,
[2025-11-23 19:48:23]     "pilotErrorDiag": "",
[2025-11-23 19:48:23]  *** Listing of results directory ***
[2025-11-23 19:48:23] total 1315104
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 23:09 pilot3.tar.gz
[2025-11-23 19:48:23] -rwx------ 1 boincer umatlas     36292 Nov 21 23:13 runpilot2-wrapper.sh
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 23:13 queuedata.json
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas       100 Nov 23 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 19:48:23] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 12:37 run_atlas
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas       105 Nov 23 12:37 job.xml
[2025-11-23 19:48:23] -rw-r--r-- 2 boincer umatlas 411852302 Nov 23 12:37 EVNT.47483658._000247.pool.root.1
[2025-11-23 19:48:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 12:37 start_atlas.sh
[2025-11-23 19:48:23] drwxrwx--x 2 boincer umatlas      4096 Nov 23 12:37 shared
[2025-11-23 19:48:23] -rw-r--r-- 2 boincer umatlas    590095 Nov 23 12:37 input.tar.gz
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas         0 Nov 23 12:37 boinc_lockfile
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 12:37 pandaJob.out
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas        57 Nov 23 12:37 setup.sh.local
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas    989786 Nov 23 12:37 agis_schedconf.cvmfs.json
[2025-11-23 19:48:23] drwx------ 5 boincer umatlas      4096 Nov 23 12:37 pilot3
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas      5955 Nov 23 19:37 init_data.xml
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas       532 Nov 23 19:39 boinc_task_state.xml
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas 919316054 Nov 23 19:47 HITS.47556137._002439.pool.root.1
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas        95 Nov 23 19:47 pilot_heartbeat.json
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas      1076 Nov 23 19:47 memory_monitor_summary.json
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas   1526164 Nov 23 19:47 agis_ddmendpoints.agis.ALL.json
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas   2173320 Nov 23 19:47 log.47556137._002439.job.log.tgz.1
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas      8675 Nov 23 19:48 heartbeat.json
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas        29 Nov 23 19:48 wrapper_checkpoint.txt
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 19:48 boinc_mmap_file
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas      4624 Nov 23 19:48 pilotlog.txt
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas   3615209 Nov 23 19:48 log.47556137._002439.job.log.1
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas       353 Nov 23 19:48 output.list
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas       620 Nov 23 19:48 runtime_log
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas   5806080 Nov 23 19:48 result.tar.gz
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 19:48 runtime_log.err
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas       670 Nov 23 19:48 OIIODm7Aug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdvJKDmYzUE9m.diag
[2025-11-23 19:48:23] -rw-r--r-- 1 boincer umatlas     21227 Nov 23 19:48 stderr.txt
[2025-11-23 19:48:23] HITS file was successfully produced:
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas 919316054 Nov 23 19:47 shared/HITS.pool.root.1
[2025-11-23 19:48:23]  *** Contents of shared directory: ***
[2025-11-23 19:48:23] total 1306244
[2025-11-23 19:48:23] -rw-r--r-- 2 boincer umatlas 411852302 Nov 23 12:37 ATLAS.root_0
[2025-11-23 19:48:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 12:37 start_atlas.sh
[2025-11-23 19:48:23] -rw-r--r-- 2 boincer umatlas    590095 Nov 23 12:37 input.tar.gz
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas 919316054 Nov 23 19:47 HITS.pool.root.1
[2025-11-23 19:48:23] -rw------- 1 boincer umatlas   5806080 Nov 23 19:48 result.tar.gz
19:48:25 (17273): run_atlas exited; CPU time 290058.704747
19:48:25 (17273): called boinc_finish(0)

</stderr_txt>
]]>

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