Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:35:32 (5702): wrapper (7.7.26015): starting
12:35:32 (5702): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 12:35:32] Arguments: --nthreads 12
[2025-11-23 12:35:32] Threads: 12
[2025-11-23 12:35:32] Checking for CVMFS
[2025-11-23 12:35:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 12:35:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 12:35:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 12:35:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 12:35:32] 2.11.2.0 723 113616 90980 153216 2 82 12951624 20275200 1 130560 0 48752692 99.912 6230546 33035 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 12:35:32] CVMFS is ok
[2025-11-23 12:35:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 12:35:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 12:35:32] Further information can be found at the LHC@home message board.
[2025-11-23 12:35:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 12:35:32] Checking for apptainer binary...
[2025-11-23 12:35:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 12:35:32] Running /usr/bin/apptainer --version
[2025-11-23 12:35:32] apptainer version 1.3.2-1.el7
[2025-11-23 12:35:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 12:35:34] c-205-1.aglt2.org
[2025-11-23 12:35:34] apptainer works
[2025-11-23 12:35:34] Set ATHENA_PROC_NUMBER=12
[2025-11-23 12:35:34] Set ATHENA_CORE_NUMBER=12
[2025-11-23 12:35:34] Starting ATLAS job with PandaID=6895350293
[2025-11-23 12:35:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 19:44:53]  *** The last 200 lines of the pilot log: ***
[2025-11-23 19:44:53] 2025-11-24 00:44:18,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 19:44:53] 2025-11-24 00:44:19,991 | INFO     | time since job start (25710s) is within the limit (172800.0s)
[2025-11-23 19:44:53] 2025-11-24 00:44:20,639 | INFO     | monitor loop #1928: job 0:6895350293 is in state 'finished'
[2025-11-23 19:44:53] 2025-11-24 00:44:20,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,683 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 19:44:53] 2025-11-24 00:44:21,687 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-23 19:44:53] 2025-11-24 00:44:21,689 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895350293/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,689 | INFO     | extracted standard info from prmon json
[2025-11-23 19:44:53] 2025-11-24 00:44:21,689 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 19:44:53] 2025-11-24 00:44:21,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 19:44:53] 2025-11-24 00:44:21,696 | INFO     | fitting pss+swap vs Time
[2025-11-23 19:44:53] 2025-11-24 00:44:21,696 | INFO     | sum of square deviations: 23137897627.895363
[2025-11-23 19:44:53] 2025-11-24 00:44:21,700 | INFO     | sum of deviations: 364163774396.46246
[2025-11-23 19:44:53] 2025-11-24 00:44:21,700 | INFO     | mean x: 1763932189.2185273
[2025-11-23 19:44:53] 2025-11-24 00:44:21,700 | INFO     | mean y: 3438328.940617577
[2025-11-23 19:44:53] 2025-11-24 00:44:21,701 | INFO     | intersect: -27758816225.716747
[2025-11-23 19:44:53] 2025-11-24 00:44:21,701 | INFO     | chi2: 5.14896727221838
[2025-11-23 19:44:53] 2025-11-24 00:44:21,702 | INFO     | sum of square deviations: 22323287157.65391
[2025-11-23 19:44:53] 2025-11-24 00:44:21,705 | INFO     | sum of deviations: 512033859650.63464
[2025-11-23 19:44:53] 2025-11-24 00:44:21,705 | INFO     | mean x: 1763932036.7211537
[2025-11-23 19:44:53] 2025-11-24 00:44:21,706 | INFO     | mean y: 3465977.6778846155
[2025-11-23 19:44:53] 2025-11-24 00:44:21,706 | INFO     | intersect: -40456208376.95956
[2025-11-23 19:44:53] 2025-11-24 00:44:21,706 | INFO     | chi2: 2.571093536674747
[2025-11-23 19:44:53] 2025-11-24 00:44:21,706 | INFO     | current chi2=2.571093536674747 (change=50.065840376433044 %)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,707 | INFO     | sum of square deviations: 21528025887.406334
[2025-11-23 19:44:53] 2025-11-24 00:44:21,711 | INFO     | sum of deviations: 530186902186.52277
[2025-11-23 19:44:53] 2025-11-24 00:44:21,711 | INFO     | mean x: 1763931884.2238443
[2025-11-23 19:44:53] 2025-11-24 00:44:21,711 | INFO     | mean y: 3469418.0486618006
[2025-11-23 19:44:53] 2025-11-24 00:44:21,711 | INFO     | intersect: -43438209175.981926
[2025-11-23 19:44:53] 2025-11-24 00:44:21,711 | INFO     | chi2: 2.361089134303286
[2025-11-23 19:44:53] 2025-11-24 00:44:21,712 | INFO     | current chi2=2.361089134303286 (change=8.16790207652517 %)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,712 | INFO     | right removable region: 410
[2025-11-23 19:44:53] 2025-11-24 00:44:21,712 | INFO     | sum of square deviations: 22323256474.09375
[2025-11-23 19:44:53] 2025-11-24 00:44:21,716 | INFO     | sum of deviations: 233189729895.56247
[2025-11-23 19:44:53] 2025-11-24 00:44:21,716 | INFO     | mean x: 1763932341.71875
[2025-11-23 19:44:53] 2025-11-24 00:44:21,716 | INFO     | mean y: 3462758.8509615385
[2025-11-23 19:44:53] 2025-11-24 00:44:21,716 | INFO     | intersect: -18422652928.920395
[2025-11-23 19:44:53] 2025-11-24 00:44:21,717 | INFO     | chi2: 2.9332938503230026
[2025-11-23 19:44:53] 2025-11-24 00:44:21,717 | INFO     | current chi2=2.9332938503230026 (change=43.031413966256906 %)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,717 | INFO     | sum of square deviations: 21527964886.291985
[2025-11-23 19:44:53] 2025-11-24 00:44:21,721 | INFO     | sum of deviations: 199356074119.44525
[2025-11-23 19:44:53] 2025-11-24 00:44:21,721 | INFO     | mean x: 1763932494.2189782
[2025-11-23 19:44:53] 2025-11-24 00:44:21,721 | INFO     | mean y: 3469239.2506082724
[2025-11-23 19:44:53] 2025-11-24 00:44:21,721 | INFO     | intersect: -16331128987.594858
[2025-11-23 19:44:53] 2025-11-24 00:44:21,722 | INFO     | chi2: 2.869510896058989
[2025-11-23 19:44:53] 2025-11-24 00:44:21,722 | INFO     | current chi2=2.869510896058989 (change=2.174448163691145 %)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,722 | INFO     | left removable region: 20
[2025-11-23 19:44:53] 2025-11-24 00:44:21,722 | INFO     | sum of square deviations: 18393897336.535862
[2025-11-23 19:44:53] 2025-11-24 00:44:21,726 | INFO     | sum of deviations: 326188632989.59247
[2025-11-23 19:44:53] 2025-11-24 00:44:21,726 | INFO     | mean x: 1763932463.7205129
[2025-11-23 19:44:53] 2025-11-24 00:44:21,726 | INFO     | mean y: 3509252.6384615386
[2025-11-23 19:44:53] 2025-11-24 00:44:21,726 | INFO     | intersect: -31277230685.171734
[2025-11-23 19:44:53] 2025-11-24 00:44:21,726 | INFO     | chi2: 0.0392042723729522
[2025-11-23 19:44:53] 2025-11-24 00:44:21,727 | INFO     | current memory leak: 17.73 B/s (using 390 data points, chi2=0.04)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,727 | INFO     | could have reported an average CPU frequency of 2369 MHz (18 samples)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,727 | INFO     | ..............................
[2025-11-23 19:44:53] 2025-11-24 00:44:21,727 | INFO     | . Timing measurements:
[2025-11-23 19:44:53] 2025-11-24 00:44:21,727 | INFO     | . get job = 0 s
[2025-11-23 19:44:53] 2025-11-24 00:44:21,727 | INFO     | . initial setup = 2 s
[2025-11-23 19:44:53] 2025-11-24 00:44:21,728 | INFO     | . payload setup = 7 s
[2025-11-23 19:44:53] 2025-11-24 00:44:21,728 | INFO     | . stage-in = 0 s
[2025-11-23 19:44:53] 2025-11-24 00:44:21,728 | INFO     | . payload execution = 25673 s
[2025-11-23 19:44:53] 2025-11-24 00:44:21,728 | INFO     | . stage-out = 3 s
[2025-11-23 19:44:53] 2025-11-24 00:44:21,728 | INFO     | . log creation = 0 s
[2025-11-23 19:44:53] 2025-11-24 00:44:21,728 | INFO     | ..............................
[2025-11-23 19:44:53] 2025-11-24 00:44:21,808 | INFO     | 
[2025-11-23 19:44:53] 2025-11-24 00:44:21,808 | INFO     | job summary report
[2025-11-23 19:44:53] 2025-11-24 00:44:21,808 | INFO     | --------------------------------------------------
[2025-11-23 19:44:53] 2025-11-24 00:44:21,809 | INFO     | PanDA job id: 6895350293
[2025-11-23 19:44:53] 2025-11-24 00:44:21,809 | INFO     | task id: 47556137
[2025-11-23 19:44:53] 2025-11-24 00:44:21,809 | INFO     | errors: (none)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,809 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 19:44:53] 2025-11-24 00:44:21,809 | INFO     | pilot state: finished 
[2025-11-23 19:44:53] 2025-11-24 00:44:21,809 | INFO     | transexitcode: 0
[2025-11-23 19:44:53] 2025-11-24 00:44:21,810 | INFO     | exeerrorcode: 0
[2025-11-23 19:44:53] 2025-11-24 00:44:21,810 | INFO     | exeerrordiag: 
[2025-11-23 19:44:53] 2025-11-24 00:44:21,810 | INFO     | exitcode: 0
[2025-11-23 19:44:53] 2025-11-24 00:44:21,810 | INFO     | exitmsg: OK
[2025-11-23 19:44:53] 2025-11-24 00:44:21,810 | INFO     | cpuconsumptiontime: 294577 s
[2025-11-23 19:44:53] 2025-11-24 00:44:21,810 | INFO     | nevents: 1000
[2025-11-23 19:44:53] 2025-11-24 00:44:21,811 | INFO     | neventsw: 0
[2025-11-23 19:44:53] 2025-11-24 00:44:21,811 | INFO     | pid: 16026
[2025-11-23 19:44:53] 2025-11-24 00:44:21,811 | INFO     | pgrp: 16026
[2025-11-23 19:44:53] 2025-11-24 00:44:21,811 | INFO     | corecount: 12
[2025-11-23 19:44:53] 2025-11-24 00:44:21,811 | INFO     | event service: False
[2025-11-23 19:44:53] 2025-11-24 00:44:21,811 | INFO     | sizes: {0: 2298534, 1: 2298733, 5: 2298995, 11: 2299051, 25684: 2336260, 25685: 2336259, 25689: 2345437, 25690: 2345493, 25696: 2345739}
[2025-11-23 19:44:53] 2025-11-24 00:44:21,812 | INFO     | --------------------------------------------------
[2025-11-23 19:44:53] 2025-11-24 00:44:21,812 | INFO     | 
[2025-11-23 19:44:53] 2025-11-24 00:44:21,812 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 19:44:53] 2025-11-24 00:44:21,838 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,839 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,839 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,839 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,839 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,841 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,842 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,842 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 19:44:53] 2025-11-24 00:44:21,842 | INFO     | job 6895350293 has completed (purged errors)
[2025-11-23 19:44:53] 2025-11-24 00:44:21,842 | INFO     | overall cleanup function is called
[2025-11-23 19:44:53] 2025-11-24 00:44:22,858 | INFO     | --- collectZombieJob: --- 10, [16026]
[2025-11-23 19:44:53] 2025-11-24 00:44:22,859 | INFO     | zombie collector waiting for pid 16026
[2025-11-23 19:44:53] 2025-11-24 00:44:22,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 19:44:53] 2025-11-24 00:44:22,859 | INFO     | collected zombie processes
[2025-11-23 19:44:53] 2025-11-24 00:44:22,859 | INFO     | will attempt to kill all subprocesses of pid=16026
[2025-11-23 19:44:53] 2025-11-24 00:44:22,952 | INFO     | process IDs to be killed: [16026] (in reverse order)
[2025-11-23 19:44:53] 2025-11-24 00:44:23,007 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 19:44:53] 2025-11-24 00:44:23,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 19:44:53] 2025-11-24 00:44:23,011 | INFO     | did not find any defunct processes belonging to 16026
[2025-11-23 19:44:53] 2025-11-24 00:44:23,014 | INFO     | did not find any defunct processes belonging to 16026
[2025-11-23 19:44:53] 2025-11-24 00:44:23,017 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 19:44:53] 2025-11-24 00:44:23,017 | INFO     | ready for new job
[2025-11-23 19:44:53] 2025-11-24 00:44:23,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 19:44:53] 2025-11-24 00:44:23,019 | INFO     | ***************************************
[2025-11-23 19:44:53] 2025-11-24 00:44:23,019 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 19:44:53] 2025-11-24 00:44:23,019 | INFO     | ***************************************
[2025-11-23 19:44:53] 2025-11-24 00:44:23,019 | INFO     | 
[2025-11-23 19:44:53] 2025-11-24 00:44:23,020 | INFO     | architecture information:
[2025-11-23 19:44:53] 2025-11-24 00:44:23,021 | INFO     | executing command: cat /etc/os-release
[2025-11-23 19:44:53] 2025-11-24 00:44:23,036 | INFO     | cat /etc/os-release:
[2025-11-23 19:44:53] NAME="CentOS Linux"
[2025-11-23 19:44:53] VERSION="7 (Core)"
[2025-11-23 19:44:53] ID="centos"
[2025-11-23 19:44:53] ID_LIKE="rhel fedora"
[2025-11-23 19:44:53] VERSION_ID="7"
[2025-11-23 19:44:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 19:44:53] ANSI_COLOR="0;31"
[2025-11-23 19:44:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 19:44:53] HOME_URL="https://www.centos.org/"
[2025-11-23 19:44:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 19:44:53] 
[2025-11-23 19:44:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 19:44:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 19:44:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 19:44:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 19:44:53] 
[2025-11-23 19:44:53] 2025-11-24 00:44:23,037 | INFO     | ***************************************
[2025-11-23 19:44:53] 2025-11-24 00:44:23,540 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 19:44:53] 2025-11-24 00:44:23,557 | INFO     | sufficient remaining disk space (28379709440 B)
[2025-11-23 19:44:53] 2025-11-24 00:44:23,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 19:44:53] 2025-11-24 00:44:23,557 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 19:44:53] 2025-11-24 00:44:23,557 | INFO     | update_server=False
[2025-11-23 19:44:53] 2025-11-24 00:44:23,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 19:44:53] 2025-11-24 00:44:23,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 19:44:53] 2025-11-24 00:44:23,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:44:53] 2025-11-24 00:44:23,816 | INFO     | all data control threads have been joined
[2025-11-23 19:44:53] 2025-11-24 00:44:24,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:44:53] 2025-11-24 00:44:24,147 | INFO     | aborting loop
[2025-11-23 19:44:53] 2025-11-24 00:44:24,560 | INFO     | [job] retrieve thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:24,564 | INFO     | [job] queue monitor thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:24,603 | INFO     | all job control threads have been joined
[2025-11-23 19:44:53] 2025-11-24 00:44:24,668 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:24,764 | INFO     | all payload control threads have been joined
[2025-11-23 19:44:53] 2025-11-24 00:44:24,818 | INFO     | [data] control thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:24,829 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:24,831 | INFO     | [payload] failed_post thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:25,047 | INFO     | [job] validate thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:25,127 | INFO     | [data] copytool_in thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:25,150 | INFO     | [job] job monitor thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:25,298 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:25,564 | INFO     | [data] copytool_out thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:25,609 | INFO     | [job] control thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:25,769 | INFO     | [payload] control thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:25,880 | INFO     | [payload] validate_post thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:26,054 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:26,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 19:44:53] 2025-11-24 00:44:30,718 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 19:44:53] 2025-11-24 00:44:31,754 | INFO     | [monitor] cgroup control has ended
[2025-11-23 19:44:53] 2025-11-24 00:44:32,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960180713280)>', '<ExcThread(monitor, started 139959730157312)>']
[2025-11-23 19:44:53] 2025-11-24 00:44:37,675 | INFO     | all workflow threads have been joined
[2025-11-23 19:44:53] 2025-11-24 00:44:37,675 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 19:44:53] 2025-11-24 00:44:37,675 | INFO     | traces error code: 0
[2025-11-23 19:44:53] 2025-11-24 00:44:37,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 19:44:53] 2025-11-24 00:44:53,198 | INFO     | PID=9397 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 19:44:53] 2025-11-24 00:44:53,200 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 19:44:53] 2025-11-24 00:44:53,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 19:44:53] 2025-11-24 00:44:53,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 19:44:53] 2025-11-24 00:44:53,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 19:44:53] 2025-11-24 00:44:53,201 | INFO     | [monitor] control thread has ended
[2025-11-23 19:44:53] 2025-11-24 00:44:53,305 [wrapper] ==== pilot stdout END ====
[2025-11-23 19:44:53] 2025-11-24 00:44:53,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 19:44:53] 2025-11-24 00:44:53,313 [wrapper] pilotpid: 9397
[2025-11-23 19:44:53] 2025-11-24 00:44:53,317 [wrapper] Pilot exit status: 0
[2025-11-23 19:44:53] 2025-11-24 00:44:53,333 [wrapper] pandaids: 6895350293
[2025-11-23 19:44:53] 2025-11-24 00:44:53,372 [wrapper] cleanup supervisor_pilot 18543 9398
[2025-11-23 19:44:53] 2025-11-24 00:44:53,376 [wrapper] Test setup, not cleaning
[2025-11-23 19:44:53] 2025-11-24 00:44:53,380 [wrapper] apfmon messages muted
[2025-11-23 19:44:53] 2025-11-24 00:44:53,384 [wrapper] ==== wrapper stdout END ====
[2025-11-23 19:44:53] 2025-11-24 00:44:53,388 [wrapper] ==== wrapper stderr END ====
[2025-11-23 19:44:53]  *** Error codes and diagnostics ***
[2025-11-23 19:44:53]     "exeErrorCode": 0,
[2025-11-23 19:44:53]     "exeErrorDiag": "",
[2025-11-23 19:44:53]     "pilotErrorCode": 0,
[2025-11-23 19:44:53]     "pilotErrorDiag": "",
[2025-11-23 19:44:53]  *** Listing of results directory ***
[2025-11-23 19:44:53] total 1305380
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 15:41 pilot3.tar.gz
[2025-11-23 19:44:53] -rwx------ 1 boincer umatlas     36292 Nov 22 15:58 runpilot2-wrapper.sh
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 15:58 queuedata.json
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas       100 Nov 23 12:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 19:44:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 12:35 run_atlas
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas       105 Nov 23 12:35 job.xml
[2025-11-23 19:44:53] -rw-r--r-- 2 boincer umatlas 410164227 Nov 23 12:35 EVNT.47483658._000505.pool.root.1
[2025-11-23 19:44:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 12:35 start_atlas.sh
[2025-11-23 19:44:53] drwxrwx--x 2 boincer umatlas      4096 Nov 23 12:35 shared
[2025-11-23 19:44:53] -rw-r--r-- 2 boincer umatlas    590097 Nov 23 12:35 input.tar.gz
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas         0 Nov 23 12:35 boinc_lockfile
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 12:35 pandaJob.out
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas        57 Nov 23 12:35 setup.sh.local
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas    989786 Nov 23 12:35 agis_schedconf.cvmfs.json
[2025-11-23 19:44:53] drwx------ 5 boincer umatlas      4096 Nov 23 12:35 pilot3
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas       533 Nov 23 19:36 boinc_task_state.xml
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas      5955 Nov 23 19:38 init_data.xml
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas 911090339 Nov 23 19:43 HITS.47556137._005006.pool.root.1
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas      1061 Nov 23 19:44 memory_monitor_summary.json
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas   1526164 Nov 23 19:44 agis_ddmendpoints.agis.ALL.json
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas   2168167 Nov 23 19:44 log.47556137._005006.job.log.tgz.1
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas      8662 Nov 23 19:44 heartbeat.json
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas        29 Nov 23 19:44 wrapper_checkpoint.txt
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 19:44 boinc_mmap_file
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas        95 Nov 23 19:44 pilot_heartbeat.json
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas       744 Nov 23 19:44 pilotlog.txt
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas   3597414 Nov 23 19:44 log.47556137._005006.job.log.1
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas       353 Nov 23 19:44 output.list
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas       620 Nov 23 19:44 runtime_log
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas   5785600 Nov 23 19:44 result.tar.gz
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas      9340 Nov 23 19:44 runtime_log.err
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas       669 Nov 23 19:44 EGnMDmnr9g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFPKKDmV8t5Go.diag
[2025-11-23 19:44:53] -rw-r--r-- 1 boincer umatlas     21366 Nov 23 19:44 stderr.txt
[2025-11-23 19:44:53] HITS file was successfully produced:
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas 911090339 Nov 23 19:43 shared/HITS.pool.root.1
[2025-11-23 19:44:53]  *** Contents of shared directory: ***
[2025-11-23 19:44:53] total 1296544
[2025-11-23 19:44:53] -rw-r--r-- 2 boincer umatlas 410164227 Nov 23 12:35 ATLAS.root_0
[2025-11-23 19:44:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 12:35 start_atlas.sh
[2025-11-23 19:44:53] -rw-r--r-- 2 boincer umatlas    590097 Nov 23 12:35 input.tar.gz
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas 911090339 Nov 23 19:43 HITS.pool.root.1
[2025-11-23 19:44:53] -rw------- 1 boincer umatlas   5785600 Nov 23 19:44 result.tar.gz
19:44:54 (5702): run_atlas exited; CPU time 287644.789558
19:44:54 (5702): called boinc_finish(0)

</stderr_txt>
]]>

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