Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:36 (1552117): wrapper (7.7.26015): starting
17:20:36 (1552117): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 17:20:36] Arguments: --nthreads 8
[2025-11-23 17:20:36] Threads: 8
[2025-11-23 17:20:36] Checking for CVMFS
[2025-11-23 17:20:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 17:20:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 17:20:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 17:20:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 17:20:38] 2.13.3.0 9828 26278 308564 153223 3 142 30722763 32935936 21552 16776704 0 139664674 99.795 77647368 33809 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 17:20:38] CVMFS is ok
[2025-11-23 17:20:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 17:20:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 17:20:39] Further information can be found at the LHC@home message board.
[2025-11-23 17:20:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 17:20:39] Checking for apptainer binary...
[2025-11-23 17:20:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 17:20:39] Running /usr/bin/apptainer --version
[2025-11-23 17:20:39] apptainer version 1.4.4-1.el9
[2025-11-23 17:20:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 17:20:39] c-4-39.aglt2.org
[2025-11-23 17:20:39] apptainer works
[2025-11-23 17:20:39] Set ATHENA_PROC_NUMBER=8
[2025-11-23 17:20:39] Set ATHENA_CORE_NUMBER=8
[2025-11-23 17:20:40] Starting ATLAS job with PandaID=6895355473
[2025-11-23 17:20:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 06:49:05]  *** The last 200 lines of the pilot log: ***
[2025-11-24 06:49:05] 2025-11-24 11:48:17,161 | INFO     | sum of square deviations: 154042198438.98886
[2025-11-24 06:49:05] 2025-11-24 11:48:17,177 | INFO     | sum of deviations: 1719856761328.205
[2025-11-24 06:49:05] 2025-11-24 11:48:17,177 | INFO     | mean x: 1763960746.4204545
[2025-11-24 06:49:05] 2025-11-24 11:48:17,178 | INFO     | mean y: 2871811.3207070706
[2025-11-24 06:49:05] 2025-11-24 11:48:17,178 | INFO     | intersect: -19691470694.770832
[2025-11-24 06:49:05] 2025-11-24 11:48:17,179 | INFO     | chi2: 10.773802382357474
[2025-11-24 06:49:05] 2025-11-24 11:48:17,180 | INFO     | sum of square deviations: 151143240839.72592
[2025-11-24 06:49:05] 2025-11-24 11:48:17,196 | INFO     | sum of deviations: 1992801778117.4336
[2025-11-24 06:49:05] 2025-11-24 11:48:17,196 | INFO     | mean x: 1763960593.9263024
[2025-11-24 06:49:05] 2025-11-24 11:48:17,196 | INFO     | mean y: 2886169.921219822
[2025-11-24 06:49:05] 2025-11-24 11:48:17,196 | INFO     | intersect: -23254679226.820568
[2025-11-24 06:49:05] 2025-11-24 11:48:17,198 | INFO     | chi2: 7.410783106392935
[2025-11-24 06:49:05] 2025-11-24 11:48:17,198 | INFO     | current chi2=7.410783106392935 (change=31.21478524120338 %)
[2025-11-24 06:49:05] 2025-11-24 11:48:17,199 | INFO     | sum of square deviations: 148280888577.9079
[2025-11-24 06:49:05] 2025-11-24 11:48:17,216 | INFO     | sum of deviations: 2142548324893.2417
[2025-11-24 06:49:05] 2025-11-24 11:48:17,217 | INFO     | mean x: 1763960441.432225
[2025-11-24 06:49:05] 2025-11-24 11:48:17,217 | INFO     | mean y: 2894136.3158567776
[2025-11-24 06:49:05] 2025-11-24 11:48:17,217 | INFO     | intersect: -25485019547.063828
[2025-11-24 06:49:05] 2025-11-24 11:48:17,218 | INFO     | chi2: 6.076025239013676
[2025-11-24 06:49:05] 2025-11-24 11:48:17,218 | INFO     | current chi2=6.076025239013676 (change=18.011023237582354 %)
[2025-11-24 06:49:05] 2025-11-24 11:48:17,218 | INFO     | right removable region: 781
[2025-11-24 06:49:05] 2025-11-24 11:48:17,219 | INFO     | sum of square deviations: 151142796149.72565
[2025-11-24 06:49:05] 2025-11-24 11:48:17,235 | INFO     | sum of deviations: 1416062035922.5027
[2025-11-24 06:49:05] 2025-11-24 11:48:17,235 | INFO     | mean x: 1763960898.9263024
[2025-11-24 06:49:05] 2025-11-24 11:48:17,235 | INFO     | mean y: 2887786.8017789074
[2025-11-24 06:49:05] 2025-11-24 11:48:17,236 | INFO     | intersect: -16523722316.049637
[2025-11-24 06:49:05] 2025-11-24 11:48:17,237 | INFO     | chi2: 6.9564640582916715
[2025-11-24 06:49:05] 2025-11-24 11:48:17,237 | INFO     | current chi2=6.9564640582916715 (change=35.43167201875583 %)
[2025-11-24 06:49:05] 2025-11-24 11:48:17,238 | INFO     | sum of square deviations: 148279999197.9078
[2025-11-24 06:49:05] 2025-11-24 11:48:17,253 | INFO     | sum of deviations: 1196215703803.277
[2025-11-24 06:49:05] 2025-11-24 11:48:17,253 | INFO     | mean x: 1763961051.432225
[2025-11-24 06:49:05] 2025-11-24 11:48:17,254 | INFO     | mean y: 2899489.5524296677
[2025-11-24 06:49:05] 2025-11-24 11:48:17,254 | INFO     | intersect: -14227461462.933605
[2025-11-24 06:49:05] 2025-11-24 11:48:17,255 | INFO     | chi2: 5.0618101343398
[2025-11-24 06:49:05] 2025-11-24 11:48:17,255 | INFO     | current chi2=5.0618101343398 (change=27.235875986357783 %)
[2025-11-24 06:49:05] 2025-11-24 11:48:17,256 | INFO     | sum of square deviations: 145453813535.38458
[2025-11-24 06:49:05] 2025-11-24 11:48:17,270 | INFO     | sum of deviations: 1145290690040.3562
[2025-11-24 06:49:05] 2025-11-24 11:48:17,271 | INFO     | mean x: 1763961203.931789
[2025-11-24 06:49:05] 2025-11-24 11:48:17,271 | INFO     | mean y: 2902236.6293436293
[2025-11-24 06:49:05] 2025-11-24 11:48:17,271 | INFO     | intersect: -13886375021.57049
[2025-11-24 06:49:05] 2025-11-24 11:48:17,272 | INFO     | chi2: 5.033304042210186
[2025-11-24 06:49:05] 2025-11-24 11:48:17,272 | INFO     | current chi2=5.033304042210186 (change=0.5631600430096394 %)
[2025-11-24 06:49:05] 2025-11-24 11:48:17,272 | INFO     | left removable region: 30
[2025-11-24 06:49:05] 2025-11-24 11:48:17,273 | INFO     | sum of square deviations: 131335699136.93211
[2025-11-24 06:49:05] 2025-11-24 11:48:17,286 | INFO     | sum of deviations: 1486504981907.691
[2025-11-24 06:49:05] 2025-11-24 11:48:17,287 | INFO     | mean x: 1763961325.9360852
[2025-11-24 06:49:05] 2025-11-24 11:48:17,287 | INFO     | mean y: 2931434.82689747
[2025-11-24 06:49:05] 2025-11-24 11:48:17,287 | INFO     | intersect: -19962221346.387722
[2025-11-24 06:49:05] 2025-11-24 11:48:17,288 | INFO     | chi2: 0.1591033692711614
[2025-11-24 06:49:05] 2025-11-24 11:48:17,288 | INFO     | current memory leak: 11.32 B/s (using 751 data points, chi2=0.16)
[2025-11-24 06:49:05] 2025-11-24 11:48:17,289 | INFO     | could have reported an average CPU frequency of 2600 MHz (30 samples)
[2025-11-24 06:49:05] 2025-11-24 11:48:17,290 | INFO     | ..............................
[2025-11-24 06:49:05] 2025-11-24 11:48:17,290 | INFO     | . Timing measurements:
[2025-11-24 06:49:05] 2025-11-24 11:48:17,290 | INFO     | . get job = 0 s
[2025-11-24 06:49:05] 2025-11-24 11:48:17,290 | INFO     | . initial setup = 5 s
[2025-11-24 06:49:05] 2025-11-24 11:48:17,290 | INFO     | . payload setup = 36 s
[2025-11-24 06:49:05] 2025-11-24 11:48:17,290 | INFO     | . stage-in = 0 s
[2025-11-24 06:49:05] 2025-11-24 11:48:17,290 | INFO     | . payload execution = 48287 s
[2025-11-24 06:49:05] 2025-11-24 11:48:17,290 | INFO     | . stage-out = 3 s
[2025-11-24 06:49:05] 2025-11-24 11:48:17,291 | INFO     | . log creation = 0 s
[2025-11-24 06:49:05] 2025-11-24 11:48:17,291 | INFO     | ..............................
[2025-11-24 06:49:05] 2025-11-24 11:48:17,785 | INFO     | 
[2025-11-24 06:49:05] 2025-11-24 11:48:17,786 | INFO     | job summary report
[2025-11-24 06:49:05] 2025-11-24 11:48:17,786 | INFO     | --------------------------------------------------
[2025-11-24 06:49:05] 2025-11-24 11:48:17,786 | INFO     | PanDA job id: 6895355473
[2025-11-24 06:49:05] 2025-11-24 11:48:17,786 | INFO     | task id: 47556137
[2025-11-24 06:49:05] 2025-11-24 11:48:17,786 | INFO     | errors: (none)
[2025-11-24 06:49:05] 2025-11-24 11:48:17,786 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 06:49:05] 2025-11-24 11:48:17,786 | INFO     | pilot state: finished 
[2025-11-24 06:49:05] 2025-11-24 11:48:17,786 | INFO     | transexitcode: 0
[2025-11-24 06:49:05] 2025-11-24 11:48:17,786 | INFO     | exeerrorcode: 0
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | exeerrordiag: 
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | exitcode: 0
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | exitmsg: OK
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | cpuconsumptiontime: 288448 s
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | nevents: 1000
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | neventsw: 0
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | pid: 1575332
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | pgrp: 1575332
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | corecount: 8
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | event service: False
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | sizes: {0: 2298635, 1: 2298834, 2: 2298834, 13: 2298862, 23: 2298918, 24: 2299208, 34: 2299364, 48328: 2347508, 48332: 2357293, 48333: 2357349, 48340: 2357595}
[2025-11-24 06:49:05] 2025-11-24 11:48:17,787 | INFO     | --------------------------------------------------
[2025-11-24 06:49:05] 2025-11-24 11:48:17,788 | INFO     | 
[2025-11-24 06:49:05] 2025-11-24 11:48:17,788 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-24 06:49:05] 2025-11-24 11:48:17,812 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,812 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,812 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,814 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 06:49:05] 2025-11-24 11:48:17,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,815 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 06:49:05] 2025-11-24 11:48:17,816 | INFO     | job 6895355473 has completed (purged errors)
[2025-11-24 06:49:05] 2025-11-24 11:48:17,816 | INFO     | overall cleanup function is called
[2025-11-24 06:49:05] 2025-11-24 11:48:18,833 | INFO     | --- collectZombieJob: --- 10, [1575332]
[2025-11-24 06:49:05] 2025-11-24 11:48:18,834 | INFO     | zombie collector waiting for pid 1575332
[2025-11-24 06:49:05] 2025-11-24 11:48:18,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 06:49:05] 2025-11-24 11:48:18,834 | INFO     | collected zombie processes
[2025-11-24 06:49:05] 2025-11-24 11:48:18,834 | INFO     | will attempt to kill all subprocesses of pid=1575332
[2025-11-24 06:49:05] 2025-11-24 11:48:19,228 | INFO     | process IDs to be killed: [1575332] (in reverse order)
[2025-11-24 06:49:05] 2025-11-24 11:48:19,416 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 06:49:05] 2025-11-24 11:48:19,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 06:49:05] 2025-11-24 11:48:19,429 | INFO     | did not find any defunct processes belonging to 1575332
[2025-11-24 06:49:05] 2025-11-24 11:48:19,443 | INFO     | did not find any defunct processes belonging to 1575332
[2025-11-24 06:49:05] 2025-11-24 11:48:19,444 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 06:49:05] 2025-11-24 11:48:19,444 | INFO     | ready for new job
[2025-11-24 06:49:05] 2025-11-24 11:48:19,444 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 06:49:05] 2025-11-24 11:48:19,448 | INFO     | ***************************************
[2025-11-24 06:49:05] 2025-11-24 11:48:19,448 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 06:49:05] 2025-11-24 11:48:19,449 | INFO     | ***************************************
[2025-11-24 06:49:05] 2025-11-24 11:48:19,449 | INFO     | 
[2025-11-24 06:49:05] 2025-11-24 11:48:19,450 | INFO     | architecture information:
[2025-11-24 06:49:05] 2025-11-24 11:48:19,451 | INFO     | executing command: cat /etc/os-release
[2025-11-24 06:49:05] 2025-11-24 11:48:19,469 | INFO     | cat /etc/os-release:
[2025-11-24 06:49:05] NAME="CentOS Linux"
[2025-11-24 06:49:05] VERSION="7 (Core)"
[2025-11-24 06:49:05] ID="centos"
[2025-11-24 06:49:05] ID_LIKE="rhel fedora"
[2025-11-24 06:49:05] VERSION_ID="7"
[2025-11-24 06:49:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 06:49:05] ANSI_COLOR="0;31"
[2025-11-24 06:49:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 06:49:05] HOME_URL="https://www.centos.org/"
[2025-11-24 06:49:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 06:49:05] 
[2025-11-24 06:49:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 06:49:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 06:49:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 06:49:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 06:49:05] 
[2025-11-24 06:49:05] 2025-11-24 11:48:19,469 | INFO     | ***************************************
[2025-11-24 06:49:05] 2025-11-24 11:48:19,973 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-24 06:49:05] 2025-11-24 11:48:19,994 | INFO     | sufficient remaining disk space (72417804288 B)
[2025-11-24 06:49:05] 2025-11-24 11:48:19,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 06:49:05] 2025-11-24 11:48:19,995 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 06:49:05] 2025-11-24 11:48:19,995 | INFO     | update_server=False
[2025-11-24 06:49:05] 2025-11-24 11:48:19,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 06:49:05] 2025-11-24 11:48:19,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 06:49:05] 2025-11-24 11:48:20,046 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 06:49:05] 2025-11-24 11:48:20,048 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 06:49:05] 2025-11-24 11:48:20,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:49:05] 2025-11-24 11:48:20,048 | INFO     | will abort loop
[2025-11-24 06:49:05] 2025-11-24 11:48:20,174 | INFO     | all data control threads have been joined
[2025-11-24 06:49:05] 2025-11-24 11:48:20,553 | INFO     | all payload control threads have been joined
[2025-11-24 06:49:05] 2025-11-24 11:48:20,665 | INFO     | all job control threads have been joined
[2025-11-24 06:49:05] 2025-11-24 11:48:21,000 | INFO     | [job] retrieve thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:21,059 | INFO     | [job] job monitor thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:21,100 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:21,182 | INFO     | [data] control thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:21,205 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 06:49:05] 2025-11-24 11:48:21,559 | INFO     | [payload] control thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:21,603 | INFO     | [payload] failed_post thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:21,610 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:21,670 | INFO     | [job] control thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:21,790 | INFO     | [data] copytool_in thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:22,009 | INFO     | [data] copytool_out thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:22,123 | INFO     | [job] validate thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:22,167 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:22,366 | INFO     | [payload] validate_post thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:22,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:49:05] 2025-11-24 11:48:23,416 | INFO     | [job] queue monitor thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:25,213 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:30,397 | INFO     | job.realtimelogging is not enabled
[2025-11-24 06:49:05] 2025-11-24 11:48:31,408 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 06:49:05] 2025-11-24 11:48:49,500 | INFO     | PID=1560440 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 06:49:05] 2025-11-24 11:48:49,500 | INFO     | .. there are 34 such processes running
[2025-11-24 06:49:05] 2025-11-24 11:48:49,501 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 06:49:05] 2025-11-24 11:48:49,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 06:49:05] 2025-11-24 11:48:49,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 06:49:05] 2025-11-24 11:48:59,927 | INFO     | [monitor] cgroup control has ended
[2025-11-24 06:49:05] 2025-11-24 11:49:00,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057586784064)>', '<ExcThread(monitor, started 140056777967360)>']
[2025-11-24 06:49:05] 2025-11-24 11:49:00,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 06:49:05] 2025-11-24 11:49:00,559 | INFO     | [monitor] control thread has ended
[2025-11-24 06:49:05] 2025-11-24 11:49:05,108 | INFO     | all workflow threads have been joined
[2025-11-24 06:49:05] 2025-11-24 11:49:05,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 06:49:05] 2025-11-24 11:49:05,109 | INFO     | traces error code: 0
[2025-11-24 06:49:05] 2025-11-24 11:49:05,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 06:49:05] 2025-11-24 11:49:05,282 [wrapper] ==== pilot stdout END ====
[2025-11-24 06:49:05] 2025-11-24 11:49:05,287 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 06:49:05] 2025-11-24 11:49:05,291 [wrapper] pilotpid: 1560440
[2025-11-24 06:49:05] 2025-11-24 11:49:05,297 [wrapper] Pilot exit status: 0
[2025-11-24 06:49:05] 2025-11-24 11:49:05,333 [wrapper] pandaids: 6895355473
[2025-11-24 06:49:05] 2025-11-24 11:49:05,410 [wrapper] cleanup supervisor_pilot 4010449 1560441
[2025-11-24 06:49:05] 2025-11-24 11:49:05,415 [wrapper] Test setup, not cleaning
[2025-11-24 06:49:05] 2025-11-24 11:49:05,418 [wrapper] apfmon messages muted
[2025-11-24 06:49:05] 2025-11-24 11:49:05,423 [wrapper] ==== wrapper stdout END ====
[2025-11-24 06:49:05] 2025-11-24 11:49:05,436 [wrapper] ==== wrapper stderr END ====
[2025-11-24 06:49:05]  *** Error codes and diagnostics ***
[2025-11-24 06:49:05]     "exeErrorCode": 0,
[2025-11-24 06:49:05]     "exeErrorDiag": "",
[2025-11-24 06:49:05]     "pilotErrorCode": 0,
[2025-11-24 06:49:05]     "pilotErrorDiag": "",
[2025-11-24 06:49:05]  *** Listing of results directory ***
[2025-11-24 06:49:05] total 1319624
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 02:27 queuedata.json
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 02:29 pilot3.tar.gz
[2025-11-24 06:49:05] -rwx------. 1 boincer umatlas     36292 Nov 23 02:31 runpilot2-wrapper.sh
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas       100 Nov 23 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 06:49:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 17:20 run_atlas
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas       105 Nov 23 17:20 job.xml
[2025-11-24 06:49:05] -rw-r--r--. 2 boincer umatlas 411906390 Nov 23 17:20 EVNT.47483658._000659.pool.root.1
[2025-11-24 06:49:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 17:20 start_atlas.sh
[2025-11-24 06:49:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 17:20 shared
[2025-11-24 06:49:05] -rw-r--r--. 2 boincer umatlas    590104 Nov 23 17:20 input.tar.gz
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas         0 Nov 23 17:20 boinc_lockfile
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 17:20 pandaJob.out
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas        57 Nov 23 17:20 setup.sh.local
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas    989786 Nov 23 17:21 agis_schedconf.cvmfs.json
[2025-11-24 06:49:05] drwx------. 5 boincer umatlas      4096 Nov 23 17:21 pilot3
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas       533 Nov 24 06:35 boinc_task_state.xml
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas      6660 Nov 24 06:45 init_data.xml
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas 918368018 Nov 24 06:47 HITS.47556137._006550.pool.root.1
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas      1057 Nov 24 06:48 memory_monitor_summary.json
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas   1516227 Nov 24 06:48 agis_ddmendpoints.agis.ALL.json
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas   2018507 Nov 24 06:48 log.47556137._006550.job.log.tgz.1
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas        95 Nov 24 06:48 pilot_heartbeat.json
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas      8617 Nov 24 06:48 heartbeat.json
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas        29 Nov 24 06:49 wrapper_checkpoint.txt
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 06:49 boinc_mmap_file
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas      5082 Nov 24 06:49 pilotlog.txt
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas   6535400 Nov 24 06:49 log.47556137._006550.job.log.1
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas       353 Nov 24 06:49 output.list
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas       620 Nov 24 06:49 runtime_log
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas   8570880 Nov 24 06:49 result.tar.gz
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas       658 Nov 24 06:49 waEODmRkJh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0iKKDm5phYen.diag
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas      9333 Nov 24 06:49 runtime_log.err
[2025-11-24 06:49:05] -rw-r--r--. 1 boincer umatlas     21203 Nov 24 06:49 stderr.txt
[2025-11-24 06:49:05] HITS file was successfully produced:
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas 918368018 Nov 24 06:47 shared/HITS.pool.root.1
[2025-11-24 06:49:05]  *** Contents of shared directory: ***
[2025-11-24 06:49:05] total 1308072
[2025-11-24 06:49:05] -rw-r--r--. 2 boincer umatlas 411906390 Nov 23 17:20 ATLAS.root_0
[2025-11-24 06:49:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 17:20 start_atlas.sh
[2025-11-24 06:49:05] -rw-r--r--. 2 boincer umatlas    590104 Nov 23 17:20 input.tar.gz
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas 918368018 Nov 24 06:47 HITS.pool.root.1
[2025-11-24 06:49:05] -rw-------. 1 boincer umatlas   8570880 Nov 24 06:49 result.tar.gz
06:49:07 (1552117): run_atlas exited; CPU time 289817.446660
06:49:07 (1552117): called boinc_finish(0)

</stderr_txt>
]]>

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