Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:12:41 (5689): wrapper (7.7.26015): starting
12:12:41 (5689): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 12:12:41] Arguments: --nthreads 8
[2025-11-23 12:12:41] Threads: 8
[2025-11-23 12:12:41] Checking for CVMFS
[2025-11-23 12:12:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 12:12:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 12:12:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 12:12:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 12:12:41] 2.11.4.0 5420 113628 68312 153215 2 90 12749728 18432000 1885 130560 0 79676596 99.972 4844041 31782 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 12:12:41] CVMFS is ok
[2025-11-23 12:12:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 12:12:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 12:12:41] Further information can be found at the LHC@home message board.
[2025-11-23 12:12:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 12:12:41] Checking for apptainer binary...
[2025-11-23 12:12:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 12:12:41] Running /usr/bin/apptainer --version
[2025-11-23 12:12:41] apptainer version 1.3.2-1.el7
[2025-11-23 12:12:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 12:12:42] c-206-22.aglt2.org
[2025-11-23 12:12:42] apptainer works
[2025-11-23 12:12:42] Set ATHENA_PROC_NUMBER=8
[2025-11-23 12:12:42] Set ATHENA_CORE_NUMBER=8
[2025-11-23 12:12:42] Starting ATLAS job with PandaID=6893860010
[2025-11-23 12:12:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 07:59:58]  *** The last 200 lines of the pilot log: ***
[2025-11-24 07:59:58] 2025-11-24 12:59:01,853 | INFO     | fitting pss+swap vs Time
[2025-11-24 07:59:58] 2025-11-24 12:59:01,854 | INFO     | sum of square deviations: 492822949421.9194
[2025-11-24 07:59:58] 2025-11-24 12:59:01,876 | INFO     | sufficient remaining disk space (26209157120 B)
[2025-11-24 07:59:58] 2025-11-24 12:59:01,884 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-11-24 07:59:58] 2025-11-24 12:59:01,884 | INFO     | sum of deviations: 2335159600932.024
[2025-11-24 07:59:58] 2025-11-24 12:59:01,885 | INFO     | mean x: 1763953563.6006856
[2025-11-24 07:59:58] 2025-11-24 12:59:01,885 | INFO     | mean y: 2871751.467866324
[2025-11-24 07:59:58] 2025-11-24 12:59:01,885 | INFO     | intersect: -8355328905.526928
[2025-11-24 07:59:58] 2025-11-24 12:59:01,887 | INFO     | chi2: 5.968630096464004
[2025-11-24 07:59:58] 2025-11-24 12:59:01,888 | INFO     | sum of square deviations: 486515779847.6075
[2025-11-24 07:59:58] 2025-11-24 12:59:01,917 | INFO     | sum of deviations: 2720188817642.691
[2025-11-24 07:59:58] 2025-11-24 12:59:01,917 | INFO     | mean x: 1763953411.1032703
[2025-11-24 07:59:58] 2025-11-24 12:59:01,918 | INFO     | mean y: 2881057.160929432
[2025-11-24 07:59:58] 2025-11-24 12:59:01,918 | INFO     | intersect: -9859669228.934158
[2025-11-24 07:59:58] 2025-11-24 12:59:01,919 | INFO     | chi2: 2.7959733691888062
[2025-11-24 07:59:58] 2025-11-24 12:59:01,919 | INFO     | current chi2=2.7959733691888062 (change=53.15552607548548 %)
[2025-11-24 07:59:58] 2025-11-24 12:59:01,920 | INFO     | sum of square deviations: 480262657798.2805
[2025-11-24 07:59:58] 2025-11-24 12:59:01,945 | INFO     | sum of deviations: 2811984896266.9946
[2025-11-24 07:59:58] 2025-11-24 12:59:01,945 | INFO     | mean x: 1763953258.6058772
[2025-11-24 07:59:58] 2025-11-24 12:59:01,945 | INFO     | mean y: 2883293.41227312
[2025-11-24 07:59:58] 2025-11-24 12:59:01,945 | INFO     | intersect: -10325235789.716728
[2025-11-24 07:59:58] 2025-11-24 12:59:01,946 | INFO     | chi2: 2.4935731477812935
[2025-11-24 07:59:58] 2025-11-24 12:59:01,946 | INFO     | current chi2=2.4935731477812935 (change=10.815561576512724 %)
[2025-11-24 07:59:58] 2025-11-24 12:59:01,947 | INFO     | right removable region: 1156
[2025-11-24 07:59:58] 2025-11-24 12:59:01,948 | INFO     | sum of square deviations: 486515352237.6074
[2025-11-24 07:59:58] 2025-11-24 12:59:01,978 | INFO     | sum of deviations: 2017331475291.3896
[2025-11-24 07:59:58] 2025-11-24 12:59:01,978 | INFO     | mean x: 1763953716.1032703
[2025-11-24 07:59:58] 2025-11-24 12:59:01,978 | INFO     | mean y: 2879428.213425129
[2025-11-24 07:59:58] 2025-11-24 12:59:01,979 | INFO     | intersect: -7311338583.789673
[2025-11-24 07:59:58] 2025-11-24 12:59:01,980 | INFO     | chi2: 3.81392963210036
[2025-11-24 07:59:58] 2025-11-24 12:59:01,981 | INFO     | current chi2=3.81392963210036 (change=36.10041884887712 %)
[2025-11-24 07:59:58] 2025-11-24 12:59:01,982 | INFO     | sum of square deviations: 480261802578.2802
[2025-11-24 07:59:58] 2025-11-24 12:59:02,002 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6893860010: 8434492 B (within 2537553920 B limit)
[2025-11-24 07:59:58] 2025-11-24 12:59:02,002 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6893860010/HITS.47523449._005385.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-24 07:59:58] 2025-11-24 12:59:02,003 | INFO     | total size of present files: 0 B (workdir size: 8434492 B)
[2025-11-24 07:59:58] 2025-11-24 12:59:02,003 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6893860010/HITS.47523449._005385.pool.root.1 since it does not exist
[2025-11-24 07:59:58] 2025-11-24 12:59:02,066 | INFO     | sum of deviations: 1919303009205.2869
[2025-11-24 07:59:58] 2025-11-24 12:59:02,066 | INFO     | mean x: 1763953868.6058772
[2025-11-24 07:59:58] 2025-11-24 12:59:02,068 | INFO     | mean y: 2881818.369057908
[2025-11-24 07:59:58] 2025-11-24 12:59:02,069 | INFO     | intersect: -7046527378.738051
[2025-11-24 07:59:58] 2025-11-24 12:59:02,071 | INFO     | chi2: 3.7098920756039053
[2025-11-24 07:59:58] 2025-11-24 12:59:02,071 | INFO     | current chi2=3.7098920756039053 (change=2.727831043887413 %)
[2025-11-24 07:59:58] 2025-11-24 12:59:02,071 | INFO     | left removable region: 20
[2025-11-24 07:59:58] 2025-11-24 12:59:02,073 | INFO     | sum of square deviations: 454582785253.42865
[2025-11-24 07:59:58] 2025-11-24 12:59:02,125 | INFO     | sum of deviations: 2269334147415.658
[2025-11-24 07:59:58] 2025-11-24 12:59:02,125 | INFO     | mean x: 1763953838.1170774
[2025-11-24 07:59:58] 2025-11-24 12:59:02,126 | INFO     | mean y: 2896828.19806338
[2025-11-24 07:59:58] 2025-11-24 12:59:02,126 | INFO     | intersect: -8802981460.994816
[2025-11-24 07:59:58] 2025-11-24 12:59:02,128 | INFO     | chi2: 0.16482702294189067
[2025-11-24 07:59:58] 2025-11-24 12:59:02,128 | INFO     | current memory leak: 4.99 B/s (using 1136 data points, chi2=0.16)
[2025-11-24 07:59:58] 2025-11-24 12:59:02,130 | INFO     | could have reported an average CPU frequency of 2628 MHz (42 samples)
[2025-11-24 07:59:58] 2025-11-24 12:59:02,130 | INFO     | ..............................
[2025-11-24 07:59:58] 2025-11-24 12:59:02,130 | INFO     | . Timing measurements:
[2025-11-24 07:59:58] 2025-11-24 12:59:02,130 | INFO     | . get job = 0 s
[2025-11-24 07:59:58] 2025-11-24 12:59:02,131 | INFO     | . initial setup = 2 s
[2025-11-24 07:59:58] 2025-11-24 12:59:02,131 | INFO     | . payload setup = 5 s
[2025-11-24 07:59:58] 2025-11-24 12:59:02,131 | INFO     | . stage-in = 0 s
[2025-11-24 07:59:58] 2025-11-24 12:59:02,131 | INFO     | . payload execution = 71134 s
[2025-11-24 07:59:58] 2025-11-24 12:59:02,132 | INFO     | . stage-out = 4 s
[2025-11-24 07:59:58] 2025-11-24 12:59:02,132 | INFO     | . log creation = 0 s
[2025-11-24 07:59:58] 2025-11-24 12:59:02,132 | INFO     | ..............................
[2025-11-24 07:59:58] 2025-11-24 12:59:02,265 | INFO     | 
[2025-11-24 07:59:58] 2025-11-24 12:59:02,266 | INFO     | job summary report
[2025-11-24 07:59:58] 2025-11-24 12:59:02,266 | INFO     | --------------------------------------------------
[2025-11-24 07:59:58] 2025-11-24 12:59:02,266 | INFO     | PanDA job id: 6893860010
[2025-11-24 07:59:58] 2025-11-24 12:59:02,266 | INFO     | task id: 47523449
[2025-11-24 07:59:58] 2025-11-24 12:59:02,267 | INFO     | errors: (none)
[2025-11-24 07:59:58] 2025-11-24 12:59:02,267 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 07:59:58] 2025-11-24 12:59:02,267 | INFO     | pilot state: finished 
[2025-11-24 07:59:58] 2025-11-24 12:59:02,267 | INFO     | transexitcode: 0
[2025-11-24 07:59:58] 2025-11-24 12:59:02,268 | INFO     | exeerrorcode: 0
[2025-11-24 07:59:58] 2025-11-24 12:59:02,268 | INFO     | exeerrordiag: 
[2025-11-24 07:59:58] 2025-11-24 12:59:02,268 | INFO     | exitcode: 0
[2025-11-24 07:59:58] 2025-11-24 12:59:02,269 | INFO     | exitmsg: OK
[2025-11-24 07:59:58] 2025-11-24 12:59:02,269 | INFO     | cpuconsumptiontime: 550910 s
[2025-11-24 07:59:58] 2025-11-24 12:59:02,269 | INFO     | nevents: 1000
[2025-11-24 07:59:58] 2025-11-24 12:59:02,269 | INFO     | neventsw: 0
[2025-11-24 07:59:58] 2025-11-24 12:59:02,270 | INFO     | pid: 16802
[2025-11-24 07:59:58] 2025-11-24 12:59:02,270 | INFO     | pgrp: 16802
[2025-11-24 07:59:58] 2025-11-24 12:59:02,270 | INFO     | corecount: 8
[2025-11-24 07:59:58] 2025-11-24 12:59:02,270 | INFO     | event service: False
[2025-11-24 07:59:58] 2025-11-24 12:59:02,271 | INFO     | sizes: {0: 2297978, 1: 2298834, 2: 2298834, 5: 2299124, 12: 2299180, 71143: 2356190, 71147: 2365975, 71149: 2366031, 71152: 2366305}
[2025-11-24 07:59:58] 2025-11-24 12:59:02,271 | INFO     | --------------------------------------------------
[2025-11-24 07:59:58] 2025-11-24 12:59:02,271 | INFO     | 
[2025-11-24 07:59:58] 2025-11-24 12:59:02,272 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-24 07:59:58] 2025-11-24 12:59:02,307 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 07:59:58] 2025-11-24 12:59:02,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,311 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 07:59:58] 2025-11-24 12:59:02,311 | INFO     | job 6893860010 has completed (purged errors)
[2025-11-24 07:59:58] 2025-11-24 12:59:02,311 | INFO     | overall cleanup function is called
[2025-11-24 07:59:58] 2025-11-24 12:59:02,409 | INFO     | number of running child processes to parent process 16802: 1
[2025-11-24 07:59:58] 2025-11-24 12:59:02,409 | INFO     | maximum number of monitored processes: 16
[2025-11-24 07:59:58] 2025-11-24 12:59:02,410 | INFO     | aborting job monitoring since job object (job id=6893860010) has expired
[2025-11-24 07:59:58] 2025-11-24 12:59:03,339 | INFO     | --- collectZombieJob: --- 10, [16802]
[2025-11-24 07:59:58] 2025-11-24 12:59:03,339 | INFO     | zombie collector waiting for pid 16802
[2025-11-24 07:59:58] 2025-11-24 12:59:03,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 07:59:58] 2025-11-24 12:59:03,352 | INFO     | collected zombie processes
[2025-11-24 07:59:58] 2025-11-24 12:59:03,352 | INFO     | will attempt to kill all subprocesses of pid=16802
[2025-11-24 07:59:58] 2025-11-24 12:59:03,516 | INFO     | process IDs to be killed: [16802] (in reverse order)
[2025-11-24 07:59:58] 2025-11-24 12:59:03,558 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 07:59:58] 2025-11-24 12:59:03,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 07:59:58] 2025-11-24 12:59:03,561 | INFO     | did not find any defunct processes belonging to 16802
[2025-11-24 07:59:58] 2025-11-24 12:59:03,563 | INFO     | did not find any defunct processes belonging to 16802
[2025-11-24 07:59:58] 2025-11-24 12:59:03,564 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 07:59:58] 2025-11-24 12:59:03,564 | INFO     | ready for new job
[2025-11-24 07:59:58] 2025-11-24 12:59:03,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 07:59:58] 2025-11-24 12:59:03,568 | INFO     | ***************************************
[2025-11-24 07:59:58] 2025-11-24 12:59:03,568 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 07:59:58] 2025-11-24 12:59:03,569 | INFO     | ***************************************
[2025-11-24 07:59:58] 2025-11-24 12:59:03,569 | INFO     | 
[2025-11-24 07:59:58] 2025-11-24 12:59:03,569 | INFO     | architecture information:
[2025-11-24 07:59:58] 2025-11-24 12:59:03,570 | INFO     | executing command: cat /etc/os-release
[2025-11-24 07:59:58] 2025-11-24 12:59:03,579 | INFO     | cat /etc/os-release:
[2025-11-24 07:59:58] NAME="CentOS Linux"
[2025-11-24 07:59:58] VERSION="7 (Core)"
[2025-11-24 07:59:58] ID="centos"
[2025-11-24 07:59:58] ID_LIKE="rhel fedora"
[2025-11-24 07:59:58] VERSION_ID="7"
[2025-11-24 07:59:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 07:59:58] ANSI_COLOR="0;31"
[2025-11-24 07:59:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 07:59:58] HOME_URL="https://www.centos.org/"
[2025-11-24 07:59:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 07:59:58] 
[2025-11-24 07:59:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 07:59:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 07:59:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 07:59:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 07:59:58] 
[2025-11-24 07:59:58] 2025-11-24 12:59:03,580 | INFO     | ***************************************
[2025-11-24 07:59:58] 2025-11-24 12:59:04,082 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-24 07:59:58] 2025-11-24 12:59:04,095 | INFO     | sufficient remaining disk space (26228031488 B)
[2025-11-24 07:59:58] 2025-11-24 12:59:04,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 07:59:58] 2025-11-24 12:59:04,096 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 07:59:58] 2025-11-24 12:59:04,096 | INFO     | update_server=False
[2025-11-24 07:59:58] 2025-11-24 12:59:04,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 07:59:58] 2025-11-24 12:59:04,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:59:58] 2025-11-24 12:59:04,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:59:58] 2025-11-24 12:59:04,097 | INFO     | aborting loop
[2025-11-24 07:59:58] 2025-11-24 12:59:04,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 07:59:58] 2025-11-24 12:59:04,629 | INFO     | all payload control threads have been joined
[2025-11-24 07:59:58] 2025-11-24 12:59:04,935 | INFO     | all data control threads have been joined
[2025-11-24 07:59:58] 2025-11-24 12:59:05,101 | INFO     | [job] retrieve thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:05,102 | INFO     | [job] job monitor thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:05,102 | INFO     | [job] queue monitor thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:05,255 | INFO     | [payload] validate_post thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:05,309 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:05,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 07:59:58] 2025-11-24 12:59:05,462 | INFO     | [data] copytool_in thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:05,525 | INFO     | all job control threads have been joined
[2025-11-24 07:59:58] 2025-11-24 12:59:05,597 | INFO     | [job] validate thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:05,634 | INFO     | [payload] control thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:05,863 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:05,941 | INFO     | [data] control thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:06,132 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:06,328 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:06,335 | INFO     | [payload] failed_post thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:06,530 | INFO     | [job] control thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:07,391 | INFO     | [data] copytool_out thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:08,420 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 07:59:58] 2025-11-24 12:59:34,399 | INFO     | PID=10116 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 07:59:58] 2025-11-24 12:59:34,399 | INFO     | .. there are 3 such processes running
[2025-11-24 07:59:58] 2025-11-24 12:59:34,400 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 07:59:58] 2025-11-24 12:59:34,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 07:59:58] 2025-11-24 12:59:34,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 07:59:58] 2025-11-24 12:59:52,092 | INFO     | [monitor] cgroup control has ended
[2025-11-24 07:59:58] 2025-11-24 12:59:53,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140542043645760)>', '<ExcThread(monitor, started 140541387859712)>']
[2025-11-24 07:59:58] 2025-11-24 12:59:53,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 07:59:58] 2025-11-24 12:59:53,503 | INFO     | [monitor] control thread has ended
[2025-11-24 07:59:58] 2025-11-24 12:59:58,502 | INFO     | all workflow threads have been joined
[2025-11-24 07:59:58] 2025-11-24 12:59:58,502 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 07:59:58] 2025-11-24 12:59:58,502 | INFO     | traces error code: 0
[2025-11-24 07:59:58] 2025-11-24 12:59:58,503 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 07:59:58] 2025-11-24 12:59:58,631 [wrapper] ==== pilot stdout END ====
[2025-11-24 07:59:58] 2025-11-24 12:59:58,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 07:59:58] 2025-11-24 12:59:58,636 [wrapper] pilotpid: 10116
[2025-11-24 07:59:58] 2025-11-24 12:59:58,639 [wrapper] Pilot exit status: 0
[2025-11-24 07:59:58] 2025-11-24 12:59:58,648 [wrapper] pandaids: 6893860010
[2025-11-24 07:59:58] 2025-11-24 12:59:58,689 [wrapper] cleanup supervisor_pilot 13785 10117
[2025-11-24 07:59:58] 2025-11-24 12:59:58,692 [wrapper] Test setup, not cleaning
[2025-11-24 07:59:58] 2025-11-24 12:59:58,694 [wrapper] apfmon messages muted
[2025-11-24 07:59:58] 2025-11-24 12:59:58,697 [wrapper] ==== wrapper stdout END ====
[2025-11-24 07:59:58] 2025-11-24 12:59:58,700 [wrapper] ==== wrapper stderr END ====
[2025-11-24 07:59:58]  *** Error codes and diagnostics ***
[2025-11-24 07:59:58]     "exeErrorCode": 0,
[2025-11-24 07:59:58]     "exeErrorDiag": "",
[2025-11-24 07:59:58]     "pilotErrorCode": 0,
[2025-11-24 07:59:58]     "pilotErrorDiag": "",
[2025-11-24 07:59:58]  *** Listing of results directory ***
[2025-11-24 07:59:58] total 1341184
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 08:12 pilot3.tar.gz
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 08:33 queuedata.json
[2025-11-24 07:59:58] -rwx------ 1 boincer umatlas     36292 Nov 20 08:33 runpilot2-wrapper.sh
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas       100 Nov 23 12:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 07:59:58] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 12:12 run_atlas
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas       105 Nov 23 12:12 job.xml
[2025-11-24 07:59:58] -rw-r--r-- 2 boincer umatlas 407542228 Nov 23 12:12 EVNT.47493127._000539.pool.root.1
[2025-11-24 07:59:58] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 12:12 start_atlas.sh
[2025-11-24 07:59:58] drwxrwx--x 2 boincer umatlas      4096 Nov 23 12:12 shared
[2025-11-24 07:59:58] -rw-r--r-- 2 boincer umatlas    590101 Nov 23 12:12 input.tar.gz
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas         0 Nov 23 12:12 boinc_lockfile
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 12:12 pandaJob.out
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas        57 Nov 23 12:12 setup.sh.local
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas    989785 Nov 23 12:12 agis_schedconf.cvmfs.json
[2025-11-24 07:59:58] drwx------ 5 boincer umatlas      4096 Nov 23 12:12 pilot3
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas       533 Nov 24 07:48 boinc_task_state.xml
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas      5952 Nov 24 07:54 init_data.xml
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas 937514663 Nov 24 07:58 HITS.47523449._005385.pool.root.1
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas      1068 Nov 24 07:58 memory_monitor_summary.json
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas   1516227 Nov 24 07:58 agis_ddmendpoints.agis.ALL.json
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas   2331024 Nov 24 07:58 log.47523449._005385.job.log.tgz.1
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas      8653 Nov 24 07:59 heartbeat.json
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas        95 Nov 24 07:59 pilot_heartbeat.json
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas        29 Nov 24 07:59 wrapper_checkpoint.txt
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 07:59 boinc_mmap_file
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas      4821 Nov 24 07:59 pilotlog.txt
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas   9868449 Nov 24 07:59 log.47523449._005385.job.log.1
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas       353 Nov 24 07:59 output.list
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas       620 Nov 24 07:59 runtime_log
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas  12216320 Nov 24 07:59 result.tar.gz
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas       668 Nov 24 07:59 trZNDmNyJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmxHKDmDZBfsn.diag
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 07:59 runtime_log.err
[2025-11-24 07:59:58] -rw-r--r-- 1 boincer umatlas     21532 Nov 24 07:59 stderr.txt
[2025-11-24 07:59:58] HITS file was successfully produced:
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas 937514663 Nov 24 07:58 shared/HITS.pool.root.1
[2025-11-24 07:59:58]  *** Contents of shared directory: ***
[2025-11-24 07:59:58] total 1326068
[2025-11-24 07:59:58] -rw-r--r-- 2 boincer umatlas 407542228 Nov 23 12:12 ATLAS.root_0
[2025-11-24 07:59:58] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 12:12 start_atlas.sh
[2025-11-24 07:59:58] -rw-r--r-- 2 boincer umatlas    590101 Nov 23 12:12 input.tar.gz
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas 937514663 Nov 24 07:58 HITS.pool.root.1
[2025-11-24 07:59:58] -rw------- 1 boincer umatlas  12216320 Nov 24 07:59 result.tar.gz
07:59:59 (5689): run_atlas exited; CPU time 549742.202965
07:59:59 (5689): called boinc_finish(0)

</stderr_txt>
]]>

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