Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:40:20 (2564914): wrapper (7.7.26015): starting
01:40:20 (2564914): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 01:40:20] Arguments: --nthreads 4
[2025-11-26 01:40:20] Threads: 4
[2025-11-26 01:40:20] Checking for CVMFS
[2025-11-26 01:40:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:40:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:40:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:40:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:40:21] 2.9.2.0 945149 10633 93668 153303 0 81 27904927 36864000 0 130560 1 4182577 99.933 549308 687 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 01:40:21] CVMFS is ok
[2025-11-26 01:40:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 01:40:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 01:40:21] Further information can be found at the LHC@home message board.
[2025-11-26 01:40:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:40:21] Checking for apptainer binary...
[2025-11-26 01:40:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 01:40:21] Running /usr/bin/apptainer --version
[2025-11-26 01:40:21] apptainer version 1.4.1-1.1
[2025-11-26 01:40:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:40:21] thA317
[2025-11-26 01:40:21] apptainer works
[2025-11-26 01:40:21] Set ATHENA_PROC_NUMBER=4
[2025-11-26 01:40:21] Set ATHENA_CORE_NUMBER=4
[2025-11-26 01:40:21] Starting ATLAS job with PandaID=6895337532
[2025-11-26 01:40:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:39:07]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:39:07] 2025-11-26 07:38:27,771 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:39:07] 2025-11-26 07:38:27,771 | INFO     | update_server=False
[2025-11-26 08:39:07] 2025-11-26 07:38:27,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:39:07] 2025-11-26 07:38:27,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:39:07] 2025-11-26 07:38:27,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:39:07] 2025-11-26 07:38:27,771 | INFO     | aborting loop
[2025-11-26 08:39:07] 2025-11-26 07:38:27,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:39:07] 2025-11-26 07:38:28,546 | INFO     | all job control threads have been joined
[2025-11-26 08:39:07] 2025-11-26 07:38:28,690 | INFO     | all data control threads have been joined
[2025-11-26 08:39:07] 2025-11-26 07:38:28,776 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:28,777 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:28,777 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:28,811 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:29,278 | INFO     | all payload control threads have been joined
[2025-11-26 08:39:07] 2025-11-26 07:38:29,312 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:29,552 | INFO     | [job] control thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:29,610 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:29,696 | INFO     | [data] control thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:29,777 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:29,972 | INFO     | [job] validate thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:30,161 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:30,255 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:30,259 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:30,283 | INFO     | [payload] control thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:30,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:39:07] 2025-11-26 07:38:34,980 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:37,915 | INFO     | job.realtimelogging is not enabled
[2025-11-26 08:39:07] 2025-11-26 07:38:38,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:39:07] 2025-11-26 07:38:57,794 | INFO     | PID=2568714 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:39:07] 2025-11-26 07:38:57,794 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:39:07] 2025-11-26 07:38:57,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:39:07] 2025-11-26 07:38:57,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:39:07] 2025-11-26 07:39:01,986 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:39:07] 2025-11-26 07:39:02,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599396919104)>', '<ExcThread(monitor, started 140598086457088)>']
[2025-11-26 08:39:07] 2025-11-26 07:39:02,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:39:07] 2025-11-26 07:39:02,822 | INFO     | [monitor] control thread has ended
[2025-11-26 08:39:07] 2025-11-26 07:39:07,551 | INFO     | all workflow threads have been joined
[2025-11-26 08:39:07] 2025-11-26 07:39:07,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:39:07] 2025-11-26 07:39:07,551 | INFO     | traces error code: 0
[2025-11-26 08:39:07] 2025-11-26 07:39:07,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:39:07] 2025-11-26 07:39:07,636 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:39:07] 2025-11-26 07:39:07,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:39:07] 2025-11-26 07:39:07,645 [wrapper] pilotpid: 2568714
[2025-11-26 08:39:07] 2025-11-26 07:39:07,649 [wrapper] Pilot exit status: 0
[2025-11-26 08:39:07] 2025-11-26 07:39:07,662 [wrapper] pandaids: 6895337532
[2025-11-26 08:39:07] 2025-11-26 07:39:07,688 [wrapper] cleanup supervisor_pilot 2623882 2568715
[2025-11-26 08:39:07] 2025-11-26 07:39:07,692 [wrapper] Test setup, not cleaning
[2025-11-26 08:39:07] 2025-11-26 07:39:07,696 [wrapper] apfmon messages muted
[2025-11-26 08:39:07] 2025-11-26 07:39:07,700 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:39:07] 2025-11-26 07:39:07,704 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:39:07]  *** Error codes and diagnostics ***
[2025-11-26 08:39:07]     "exeErrorCode": 0,
[2025-11-26 08:39:07]     "exeErrorDiag": "",
[2025-11-26 08:39:07]     "pilotErrorCode": 0,
[2025-11-26 08:39:07]     "pilotErrorDiag": "",
[2025-11-26 08:39:07]  *** Listing of results directory ***
[2025-11-26 08:39:07] total 1304428
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc    576529 Nov 22 08:52 pilot3.tar.gz
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc      5112 Nov 22 09:12 queuedata.json
[2025-11-26 08:39:07] -rwx------ 1 boinc boinc     36292 Nov 22 09:13 runpilot2-wrapper.sh
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc       100 Nov 26 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:39:07] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 01:40 run_atlas
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc       105 Nov 26 01:40 job.xml
[2025-11-26 08:39:07] -rw-r--r-- 2 boinc boinc 410078322 Nov 26 01:40 EVNT.47483658._000311.pool.root.1
[2025-11-26 08:39:07] drwxrwx--x 2 boinc boinc      4096 Nov 26 01:40 shared
[2025-11-26 08:39:07] -rw-r--r-- 2 boinc boinc    590103 Nov 26 01:40 input.tar.gz
[2025-11-26 08:39:07] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:40 start_atlas.sh
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:40 boinc_setup_complete
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc      6378 Nov 26 01:40 init_data.xml
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:40 boinc_lockfile
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc      2784 Nov 26 01:40 pandaJob.out
[2025-11-26 08:39:07] -rw------- 1 boinc boinc    991877 Nov 26 01:40 agis_schedconf.cvmfs.json
[2025-11-26 08:39:07] drwx------ 5 boinc boinc      4096 Nov 26 01:40 pilot3
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc       531 Nov 26 08:33 boinc_task_state.xml
[2025-11-26 08:39:07] -rw------- 1 boinc boinc 912144005 Nov 26 08:37 HITS.47556137._003077.pool.root.1
[2025-11-26 08:39:07] -rw------- 1 boinc boinc        95 Nov 26 08:38 pilot_heartbeat.json
[2025-11-26 08:39:07] -rw------- 1 boinc boinc      1030 Nov 26 08:38 memory_monitor_summary.json
[2025-11-26 08:39:07] -rw------- 1 boinc boinc   1516240 Nov 26 08:38 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:39:07] -rw------- 1 boinc boinc   1270659 Nov 26 08:38 log.47556137._003077.job.log.tgz.1
[2025-11-26 08:39:07] -rw------- 1 boinc boinc      8571 Nov 26 08:38 heartbeat.json
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc        28 Nov 26 08:38 wrapper_checkpoint.txt
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc      8192 Nov 26 08:38 boinc_mmap_file
[2025-11-26 08:39:07] -rw------- 1 boinc boinc      4824 Nov 26 08:39 pilotlog.txt
[2025-11-26 08:39:07] -rw------- 1 boinc boinc   3534304 Nov 26 08:39 log.47556137._003077.job.log.1
[2025-11-26 08:39:07] -rw------- 1 boinc boinc       353 Nov 26 08:39 output.list
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc       620 Nov 26 08:39 runtime_log
[2025-11-26 08:39:07] -rw------- 1 boinc boinc   4823040 Nov 26 08:39 result.tar.gz
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc      8898 Nov 26 08:39 runtime_log.err
[2025-11-26 08:39:07] -rw------- 1 boinc boinc       665 Nov 26 08:39 qGKNDmavxg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDme1HKDmJykyAo.diag
[2025-11-26 08:39:07] -rw-r--r-- 1 boinc boinc      7611 Nov 26 08:39 stderr.txt
[2025-11-26 08:39:07] HITS file was successfully produced:
[2025-11-26 08:39:07] -rw------- 1 boinc boinc 912144005 Nov 26 08:37 shared/HITS.pool.root.1
[2025-11-26 08:39:07]  *** Contents of shared directory: ***
[2025-11-26 08:39:07] total 1296552
[2025-11-26 08:39:07] -rw-r--r-- 2 boinc boinc 410078322 Nov 26 01:40 ATLAS.root_0
[2025-11-26 08:39:07] -rw-r--r-- 2 boinc boinc    590103 Nov 26 01:40 input.tar.gz
[2025-11-26 08:39:07] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:40 start_atlas.sh
[2025-11-26 08:39:07] -rw------- 1 boinc boinc 912144005 Nov 26 08:37 HITS.pool.root.1
[2025-11-26 08:39:07] -rw------- 1 boinc boinc   4823040 Nov 26 08:39 result.tar.gz
08:39:08 (2564914): run_atlas exited; CPU time 98164.421926
08:39:08 (2564914): called boinc_finish(0)

</stderr_txt>
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