Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:10:06 (1004109): wrapper (7.7.26015): starting
12:10:06 (1004109): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 12:10:06] Arguments: --nthreads 8
[2025-11-23 12:10:06] Threads: 8
[2025-11-23 12:10:06] Checking for CVMFS
[2025-11-23 12:10:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 12:10:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 12:10:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 12:10:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 12:10:07] 2.13.2.0 1657905 26220 171156 153215 1 703 34835822 40960001 39286 16776704 0 332890278 99.704 239013299 46756 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 12:10:07] CVMFS is ok
[2025-11-23 12:10:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 12:10:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 12:10:08] Further information can be found at the LHC@home message board.
[2025-11-23 12:10:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 12:10:08] Checking for apptainer binary...
[2025-11-23 12:10:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 12:10:08] Running /usr/bin/apptainer --version
[2025-11-23 12:10:09] apptainer version 1.4.4-1.el9
[2025-11-23 12:10:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 12:10:09] c-208-39.aglt2.org
[2025-11-23 12:10:09] apptainer works
[2025-11-23 12:10:09] Set ATHENA_PROC_NUMBER=8
[2025-11-23 12:10:09] Set ATHENA_CORE_NUMBER=8
[2025-11-23 12:10:10] Starting ATLAS job with PandaID=6895330464
[2025-11-23 12:10:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:13:00]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:13:00] 2025-11-24 09:12:05,035 | INFO     | time since job start (57658s) is within the limit (172800.0s)
[2025-11-24 04:13:00] 2025-11-24 09:12:05,701 | INFO     | monitor loop #3328: job 0:6895330464 is in state 'finished'
[2025-11-24 04:13:00] 2025-11-24 09:12:05,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:13:00] 2025-11-24 09:12:07,679 | INFO     | PID=1010129 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 04:13:00] 2025-11-24 09:12:07,680 | INFO     | .. there are 47 such processes running
[2025-11-24 04:13:00] 2025-11-24 09:12:08,229 | INFO     | monitor loop #3329: job 0:6895330464 is in state 'finished'
[2025-11-24 04:13:00] 2025-11-24 09:12:08,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:13:00] 2025-11-24 09:12:08,681 | INFO     | time since job start (57661s) is within the limit (172800.0s)
[2025-11-24 04:13:00] 2025-11-24 09:12:10,688 | INFO     | time since job start (57663s) is within the limit (172800.0s)
[2025-11-24 04:13:00] 2025-11-24 09:12:10,739 | INFO     | monitor loop #3330: job 0:6895330464 is in state 'finished'
[2025-11-24 04:13:00] 2025-11-24 09:12:10,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:13:00] 2025-11-24 09:12:12,700 | INFO     | time since job start (57665s) is within the limit (172800.0s)
[2025-11-24 04:13:00] 2025-11-24 09:12:13,246 | INFO     | monitor loop #3331: job 0:6895330464 is in state 'finished'
[2025-11-24 04:13:00] 2025-11-24 09:12:13,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:13:00] 2025-11-24 09:12:14,741 | INFO     | time since job start (57667s) is within the limit (172800.0s)
[2025-11-24 04:13:00] 2025-11-24 09:12:15,750 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 04:13:00] 2025-11-24 09:12:15,758 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3757.518562499999
[2025-11-24 04:13:00] 2025-11-24 09:12:15,766 | INFO     | monitor loop #3332: job 0:6895330464 is in state 'finished'
[2025-11-24 04:13:00] 2025-11-24 09:12:15,766 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:13:00] 2025-11-24 09:12:15,792 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895330464/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 04:13:00] 2025-11-24 09:12:15,792 | INFO     | extracted standard info from prmon json
[2025-11-24 04:13:00] 2025-11-24 09:12:15,792 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 04:13:00] 2025-11-24 09:12:15,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 04:13:00] 2025-11-24 09:12:15,821 | INFO     | fitting pss+swap vs Time
[2025-11-24 04:13:00] 2025-11-24 09:12:15,822 | INFO     | sum of square deviations: 260038903785.30423
[2025-11-24 04:13:00] 2025-11-24 09:12:15,836 | INFO     | sum of deviations: 414244872356.47986
[2025-11-24 04:13:00] 2025-11-24 09:12:15,836 | INFO     | mean x: 1763946723.5217392
[2025-11-24 04:13:00] 2025-11-24 09:12:15,836 | INFO     | mean y: 2839846.4400848355
[2025-11-24 04:13:00] 2025-11-24 09:12:15,836 | INFO     | intersect: -2807146946.659866
[2025-11-24 04:13:00] 2025-11-24 09:12:15,837 | INFO     | chi2: 52.790356305463916
[2025-11-24 04:13:00] 2025-11-24 09:12:15,837 | INFO     | sum of square deviations: 255925403065.83908
[2025-11-24 04:13:00] 2025-11-24 09:12:15,893 | INFO     | sum of deviations: 758403945625.1589
[2025-11-24 04:13:00] 2025-11-24 09:12:15,893 | INFO     | mean x: 1763946571.0351813
[2025-11-24 04:13:00] 2025-11-24 09:12:15,893 | INFO     | mean y: 2852600.601279318
[2025-11-24 04:13:00] 2025-11-24 09:12:15,893 | INFO     | intersect: -5224389491.505124
[2025-11-24 04:13:00] 2025-11-24 09:12:15,893 | INFO     | chi2: 47.83333593694128
[2025-11-24 04:13:00] 2025-11-24 09:12:15,894 | INFO     | current chi2=47.83333593694128 (change=9.390011197953541 %)
[2025-11-24 04:13:00] 2025-11-24 09:12:15,894 | INFO     | right removable region: 937
[2025-11-24 04:13:00] 2025-11-24 09:12:15,894 | INFO     | sum of square deviations: 255923952485.83887
[2025-11-24 04:13:00] 2025-11-24 09:12:15,950 | INFO     | sum of deviations: 35875948554.59064
[2025-11-24 04:13:00] 2025-11-24 09:12:15,951 | INFO     | mean x: 1763946876.0351813
[2025-11-24 04:13:00] 2025-11-24 09:12:15,951 | INFO     | mean y: 2853867.0426439233
[2025-11-24 04:13:00] 2025-11-24 09:12:15,951 | INFO     | intersect: -244419851.4310918
[2025-11-24 04:13:00] 2025-11-24 09:12:15,951 | INFO     | chi2: 49.02665201363117
[2025-11-24 04:13:00] 2025-11-24 09:12:15,951 | INFO     | current chi2=49.02665201363117 (change=7.12953000365181 %)
[2025-11-24 04:13:00] 2025-11-24 09:12:15,951 | INFO     | left removable region: 10
[2025-11-24 04:13:00] 2025-11-24 09:12:15,952 | INFO     | sum of square deviations: 247026272422.307
[2025-11-24 04:13:00] 2025-11-24 09:12:15,995 | INFO     | sum of deviations: 162538931822.20633
[2025-11-24 04:13:00] 2025-11-24 09:12:15,995 | INFO     | mean x: 1763946845.5609493
[2025-11-24 04:13:00] 2025-11-24 09:12:15,995 | INFO     | mean y: 2879483.491909385
[2025-11-24 04:13:00] 2025-11-24 09:12:15,995 | INFO     | intersect: -1157766439.9444373
[2025-11-24 04:13:00] 2025-11-24 09:12:15,996 | INFO     | chi2: 41.06454250494532
[2025-11-24 04:13:00] 2025-11-24 09:12:15,996 | INFO     | current memory leak: 0.66 B/s (using 927 data points, chi2=41.06)
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | could have reported an average CPU frequency of 3750 MHz (35 samples)
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | ..............................
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | . Timing measurements:
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | . get job = 0 s
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | . initial setup = 4 s
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | . payload setup = 38 s
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | . stage-in = 0 s
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | . payload execution = 57509 s
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | . stage-out = 11 s
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | . log creation = 4 s
[2025-11-24 04:13:00] 2025-11-24 09:12:15,997 | INFO     | ..............................
[2025-11-24 04:13:00] 2025-11-24 09:12:16,205 | INFO     | 
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | job summary report
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | --------------------------------------------------
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | PanDA job id: 6895330464
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | task id: 47556137
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | errors: (none)
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | pilot state: finished 
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | transexitcode: 0
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | exeerrorcode: 0
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | exeerrordiag: 
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | exitcode: 0
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | exitmsg: OK
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | cpuconsumptiontime: 145577 s
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | nevents: 1000
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | neventsw: 0
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | pid: 1024744
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | pgrp: 1024744
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | corecount: 8
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | event service: False
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | sizes: {0: 2298806, 11: 2298806, 22: 2298834, 23: 2299124, 32: 2299152, 57553: 2350440, 57554: 2350567, 57566: 2359673, 57610: 2359863}
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | --------------------------------------------------
[2025-11-24 04:13:00] 2025-11-24 09:12:16,209 | INFO     | 
[2025-11-24 04:13:00] 2025-11-24 09:12:16,210 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-24 04:13:00] 2025-11-24 09:12:16,298 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,298 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,298 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,298 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,298 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,298 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,298 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,298 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | job 6895330464 has completed (purged errors)
[2025-11-24 04:13:00] 2025-11-24 09:12:16,299 | INFO     | overall cleanup function is called
[2025-11-24 04:13:00] 2025-11-24 09:12:17,361 | INFO     | --- collectZombieJob: --- 10, [1024744]
[2025-11-24 04:13:00] 2025-11-24 09:12:17,361 | INFO     | zombie collector waiting for pid 1024744
[2025-11-24 04:13:00] 2025-11-24 09:12:17,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 04:13:00] 2025-11-24 09:12:17,361 | INFO     | collected zombie processes
[2025-11-24 04:13:00] 2025-11-24 09:12:17,361 | INFO     | will attempt to kill all subprocesses of pid=1024744
[2025-11-24 04:13:00] 2025-11-24 09:12:18,989 | INFO     | process IDs to be killed: [1024744] (in reverse order)
[2025-11-24 04:13:00] 2025-11-24 09:12:19,510 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 04:13:00] 2025-11-24 09:12:19,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 04:13:00] 2025-11-24 09:12:19,587 | INFO     | did not find any defunct processes belonging to 1024744
[2025-11-24 04:13:00] 2025-11-24 09:12:19,641 | INFO     | did not find any defunct processes belonging to 1024744
[2025-11-24 04:13:00] 2025-11-24 09:12:19,649 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 04:13:00] 2025-11-24 09:12:19,649 | INFO     | ready for new job
[2025-11-24 04:13:00] 2025-11-24 09:12:19,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 04:13:00] 2025-11-24 09:12:19,668 | INFO     | ***************************************
[2025-11-24 04:13:00] 2025-11-24 09:12:19,668 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 04:13:00] 2025-11-24 09:12:19,668 | INFO     | ***************************************
[2025-11-24 04:13:00] 2025-11-24 09:12:19,668 | INFO     | 
[2025-11-24 04:13:00] 2025-11-24 09:12:19,677 | INFO     | architecture information:
[2025-11-24 04:13:00] 2025-11-24 09:12:19,678 | INFO     | executing command: cat /etc/os-release
[2025-11-24 04:13:00] 2025-11-24 09:12:19,767 | INFO     | cat /etc/os-release:
[2025-11-24 04:13:00] NAME="CentOS Linux"
[2025-11-24 04:13:00] VERSION="7 (Core)"
[2025-11-24 04:13:00] ID="centos"
[2025-11-24 04:13:00] ID_LIKE="rhel fedora"
[2025-11-24 04:13:00] VERSION_ID="7"
[2025-11-24 04:13:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 04:13:00] ANSI_COLOR="0;31"
[2025-11-24 04:13:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 04:13:00] HOME_URL="https://www.centos.org/"
[2025-11-24 04:13:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 04:13:00] 
[2025-11-24 04:13:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 04:13:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 04:13:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 04:13:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 04:13:00] 
[2025-11-24 04:13:00] 2025-11-24 09:12:19,767 | INFO     | ***************************************
[2025-11-24 04:13:00] 2025-11-24 09:12:20,272 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-24 04:13:00] 2025-11-24 09:12:20,311 | INFO     | sufficient remaining disk space (160156352512 B)
[2025-11-24 04:13:00] 2025-11-24 09:12:20,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:13:00] 2025-11-24 09:12:20,311 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:13:00] 2025-11-24 09:12:20,311 | INFO     | update_server=False
[2025-11-24 04:13:00] 2025-11-24 09:12:20,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:13:00] 2025-11-24 09:12:20,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:13:00] 2025-11-24 09:12:20,312 | INFO     | aborting loop
[2025-11-24 04:13:00] 2025-11-24 09:12:20,312 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:13:00] 2025-11-24 09:12:20,544 | INFO     | all payload control threads have been joined
[2025-11-24 04:13:00] 2025-11-24 09:12:20,615 | INFO     | all data control threads have been joined
[2025-11-24 04:13:00] 2025-11-24 09:12:21,050 | INFO     | all job control threads have been joined
[2025-11-24 04:13:00] 2025-11-24 09:12:21,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:13:00] 2025-11-24 09:12:21,320 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:21,320 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:21,550 | INFO     | [payload] control thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:21,629 | INFO     | [data] control thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:21,770 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:21,791 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:21,864 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:21,864 | INFO     | [job] validate thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:22,015 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:22,020 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:22,055 | INFO     | [job] control thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:22,137 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:22,255 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:22,322 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:22,554 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:23,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:13:00] 2025-11-24 09:12:27,307 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:13:00] 2025-11-24 09:12:50,016 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:13:00] 2025-11-24 09:12:51,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140495443834688)>', '<ExcThread(monitor, started 140494772344576)>']
[2025-11-24 04:13:00] 2025-11-24 09:12:52,439 | INFO     | PID=1010129 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 04:13:00] 2025-11-24 09:12:52,439 | INFO     | .. there are 47 such processes running
[2025-11-24 04:13:00] 2025-11-24 09:12:52,456 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:13:00] 2025-11-24 09:12:52,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:13:00] 2025-11-24 09:12:52,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:13:00] 2025-11-24 09:12:52,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:13:00] 2025-11-24 09:12:52,461 | INFO     | [monitor] control thread has ended
[2025-11-24 04:13:00] 2025-11-24 09:12:56,465 | INFO     | all workflow threads have been joined
[2025-11-24 04:13:00] 2025-11-24 09:12:56,465 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:13:00] 2025-11-24 09:12:56,465 | INFO     | traces error code: 0
[2025-11-24 04:13:00] 2025-11-24 09:12:56,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:13:00] 2025-11-24 09:12:58,006 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:13:00] 2025-11-24 09:12:58,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:13:00] 2025-11-24 09:12:58,045 [wrapper] pilotpid: 1010129
[2025-11-24 04:13:00] 2025-11-24 09:12:58,102 [wrapper] Pilot exit status: 0
[2025-11-24 04:13:00] 2025-11-24 09:12:58,320 [wrapper] pandaids: 6895330464
[2025-11-24 04:13:00] 2025-11-24 09:12:58,827 [wrapper] cleanup supervisor_pilot 2459617 1010130
[2025-11-24 04:13:00] 2025-11-24 09:12:58,865 [wrapper] Test setup, not cleaning
[2025-11-24 04:13:00] 2025-11-24 09:12:58,929 [wrapper] apfmon messages muted
[2025-11-24 04:13:00] 2025-11-24 09:12:58,969 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:13:00] 2025-11-24 09:12:58,994 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:13:00]  *** Error codes and diagnostics ***
[2025-11-24 04:13:00]     "exeErrorCode": 0,
[2025-11-24 04:13:00]     "exeErrorDiag": "",
[2025-11-24 04:13:00]     "pilotErrorCode": 0,
[2025-11-24 04:13:00]     "pilotErrorDiag": "",
[2025-11-24 04:13:00]  *** Listing of results directory ***
[2025-11-24 04:13:00] total 1314068
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 15:56 pilot3.tar.gz
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 16:17 queuedata.json
[2025-11-24 04:13:00] -rwx------. 1 boincer umatlas     36292 Nov 21 16:20 runpilot2-wrapper.sh
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas       100 Nov 23 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:13:00] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 12:10 run_atlas
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas       105 Nov 23 12:10 job.xml
[2025-11-24 04:13:00] -rw-r--r--. 2 boincer umatlas 409606215 Nov 23 12:10 EVNT.47483658._000139.pool.root.1
[2025-11-24 04:13:00] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 12:10 shared
[2025-11-24 04:13:00] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 12:10 input.tar.gz
[2025-11-24 04:13:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 12:10 start_atlas.sh
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas         0 Nov 23 12:10 boinc_lockfile
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 12:10 pandaJob.out
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas        57 Nov 23 12:10 setup.sh.local
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas    989785 Nov 23 12:11 agis_schedconf.cvmfs.json
[2025-11-24 04:13:00] drwx------. 5 boincer umatlas      4096 Nov 23 12:11 pilot3
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas       533 Nov 24 03:12 boinc_task_state.xml
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas 913716596 Nov 24 04:08 HITS.47556137._001384.pool.root.1
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas      7176 Nov 24 04:10 init_data.xml
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas      1090 Nov 24 04:11 memory_monitor_summary.json
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas   1526164 Nov 24 04:11 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas   2080148 Nov 24 04:11 log.47556137._001384.job.log.tgz.1
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas      8646 Nov 24 04:12 heartbeat.json
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas        95 Nov 24 04:12 pilot_heartbeat.json
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas      4825 Nov 24 04:12 pilotlog.txt
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas   7099042 Nov 24 04:12 log.47556137._001384.job.log.1
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 04:12 boinc_mmap_file
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas       353 Nov 24 04:12 output.list
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas       620 Nov 24 04:12 runtime_log
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas   9195520 Nov 24 04:12 result.tar.gz
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas      9343 Nov 24 04:12 runtime_log.err
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas       666 Nov 24 04:12 L26KDmrjng8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZiJKDmPViIan.diag
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas        29 Nov 24 04:13 wrapper_checkpoint.txt
[2025-11-24 04:13:00] -rw-r--r--. 1 boincer umatlas     21623 Nov 24 04:13 stderr.txt
[2025-11-24 04:13:00] HITS file was successfully produced:
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas 913716596 Nov 24 04:08 shared/HITS.pool.root.1
[2025-11-24 04:13:00]  *** Contents of shared directory: ***
[2025-11-24 04:13:00] total 1301896
[2025-11-24 04:13:00] -rw-r--r--. 2 boincer umatlas 409606215 Nov 23 12:10 ATLAS.root_0
[2025-11-24 04:13:00] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 12:10 input.tar.gz
[2025-11-24 04:13:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 12:10 start_atlas.sh
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas 913716596 Nov 24 04:08 HITS.pool.root.1
[2025-11-24 04:13:00] -rw-------. 1 boincer umatlas   9195520 Nov 24 04:12 result.tar.gz
04:13:02 (1004109): run_atlas exited; CPU time 146186.057988
04:13:02 (1004109): called boinc_finish(0)

</stderr_txt>
]]>

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