Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
14:27:58 (1799291): wrapper (7.7.26015): starting
14:27:58 (1799291): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 14:27:58] Arguments: --nthreads 12
[2025-11-23 14:27:58] Threads: 12
[2025-11-23 14:27:58] Checking for CVMFS
[2025-11-23 14:27:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 14:27:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 14:27:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 14:27:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 14:27:58] 2.13.2.0 1426759 328 52652 153220 0 81 11867858 16777216 92 130560 0 449821 99.993 13261 1684 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-11-23 14:27:58] CVMFS is ok
[2025-11-23 14:27:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 14:27:58] Checking for apptainer binary...
[2025-11-23 14:27:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 14:27:58] Running /usr/bin/apptainer --version
[2025-11-23 14:27:58] apptainer version 1.3.0-bp160.1.36
[2025-11-23 14:27:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 14:27:58] boinc-runner
[2025-11-23 14:27:58] apptainer works
[2025-11-23 14:27:58] Set ATHENA_PROC_NUMBER=12
[2025-11-23 14:27:58] Set ATHENA_CORE_NUMBER=12
[2025-11-23 14:27:58] Starting ATLAS job with PandaID=6895337679
[2025-11-23 14:27:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:11:48]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:11:48] 2025-11-23 23:11:15,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,437 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 17:11:48] 2025-11-23 23:11:15,439 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3351.305937500001
[2025-11-23 17:11:48] 2025-11-23 23:11:15,440 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6895337679/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,441 | INFO     | extracted standard info from prmon json
[2025-11-23 17:11:48] 2025-11-23 23:11:15,441 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:11:48] 2025-11-23 23:11:15,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | sum of square deviations: 1294014960.0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | sum of deviations: 66713807170.00014
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | mean x: 1763934580.0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | mean y: 3513417.3105590064
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | intersect: -90937314214.70938
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | chi2: 3.510671683173521
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | sum of square deviations: 1177156955.0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | sum of deviations: 107024075226.5
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | mean x: 1763934427.5
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | mean y: 3565331.980769231
[2025-11-23 17:11:48] 2025-11-23 23:11:15,442 | INFO     | intersect: -160368804776.78964
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | chi2: 1.624387816654109
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | current chi2=1.624387816654109 (change=53.72999917822789 %)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | sum of square deviations: 1067554900.0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | sum of deviations: 99974130492.0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | mean x: 1763934275.0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | mean y: 3555518.430463576
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | intersect: -165184947094.5606
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | chi2: 1.6242298842722662
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | current chi2=1.6242298842722662 (change=0.009722578575362241 %)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | right removable region: 150
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | sum of square deviations: 1177156955.0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | sum of deviations: 28027719684.500004
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | mean x: 1763934732.5
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | mean y: 3563260.185897436
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | intersect: -41995142192.192375
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | chi2: 1.957995717900925
[2025-11-23 17:11:48] 2025-11-23 23:11:15,443 | INFO     | current chi2=1.957995717900925 (change=44.22731902599997 %)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | sum of square deviations: 1067554900.0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | sum of deviations: 19085736486.000008
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | mean x: 1763934885.0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | mean y: 3575681.437086093
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | intersect: -31532035642.69503
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | chi2: 1.9426308427293906
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | current chi2=1.9426308427293906 (change=0.7847246564975365 %)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | left removable region: 20
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | sum of square deviations: 681212772.5
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | sum of deviations: 38755302233.499985
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | mean x: 1763934854.5
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | mean y: 3647950.9
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | intersect: -100349473960.58371
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | chi2: 0.0031405846245277967
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | current memory leak: 56.89 B/s (using 130 data points, chi2=0.00)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,444 | INFO     | could have reported an average CPU frequency of 3972 MHz (9 samples)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,445 | INFO     | ..............................
[2025-11-23 17:11:48] 2025-11-23 23:11:15,445 | INFO     | . Timing measurements:
[2025-11-23 17:11:48] 2025-11-23 23:11:15,445 | INFO     | . get job = 0 s
[2025-11-23 17:11:48] 2025-11-23 23:11:15,445 | INFO     | . initial setup = 3 s
[2025-11-23 17:11:48] 2025-11-23 23:11:15,445 | INFO     | . payload setup = 2 s
[2025-11-23 17:11:48] 2025-11-23 23:11:15,445 | INFO     | . stage-in = 0 s
[2025-11-23 17:11:48] 2025-11-23 23:11:15,445 | INFO     | . payload execution = 9766 s
[2025-11-23 17:11:48] 2025-11-23 23:11:15,445 | INFO     | . stage-out = 0 s
[2025-11-23 17:11:48] 2025-11-23 23:11:15,445 | INFO     | . log creation = 0 s
[2025-11-23 17:11:48] 2025-11-23 23:11:15,445 | INFO     | ..............................
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | 
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | job summary report
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | --------------------------------------------------
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | PanDA job id: 6895337679
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | task id: 47556137
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | errors: (none)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | pilot state: finished 
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | transexitcode: 0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | exeerrorcode: 0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | exeerrordiag: 
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | exitcode: 0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | exitmsg: OK
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | cpuconsumptiontime: 114006 s
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | nevents: 1000
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | neventsw: 0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | pid: 1810043
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | pgrp: 1810043
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | corecount: 12
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | event service: False
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | sizes: {0: 2298699, 2: 2298961, 11: 2298989, 9772: 2328613, 9774: 2337607, 9775: 2337663, 9779: 2338101}
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | --------------------------------------------------
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | 
[2025-11-23 17:11:48] 2025-11-23 23:11:15,470 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-23 17:11:48] 2025-11-23 23:11:15,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,480 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,480 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,480 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | job 6895337679 has completed (purged errors)
[2025-11-23 17:11:48] 2025-11-23 23:11:15,481 | INFO     | overall cleanup function is called
[2025-11-23 17:11:48] 2025-11-23 23:11:16,007 | INFO     | PID=1803182 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 17:11:48] 2025-11-23 23:11:16,007 | INFO     | .. there are 2 such processes running
[2025-11-23 17:11:48] 2025-11-23 23:11:16,492 | INFO     | --- collectZombieJob: --- 10, [1810043]
[2025-11-23 17:11:48] 2025-11-23 23:11:16,492 | INFO     | zombie collector waiting for pid 1810043
[2025-11-23 17:11:48] 2025-11-23 23:11:16,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:11:48] 2025-11-23 23:11:16,492 | INFO     | collected zombie processes
[2025-11-23 17:11:48] 2025-11-23 23:11:16,492 | INFO     | will attempt to kill all subprocesses of pid=1810043
[2025-11-23 17:11:48] 2025-11-23 23:11:16,531 | INFO     | process IDs to be killed: [1810043] (in reverse order)
[2025-11-23 17:11:48] 2025-11-23 23:11:16,560 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:11:48] 2025-11-23 23:11:16,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:11:48] 2025-11-23 23:11:16,562 | INFO     | did not find any defunct processes belonging to 1810043
[2025-11-23 17:11:48] 2025-11-23 23:11:16,563 | INFO     | did not find any defunct processes belonging to 1810043
[2025-11-23 17:11:48] 2025-11-23 23:11:16,564 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:11:48] 2025-11-23 23:11:16,564 | INFO     | ready for new job
[2025-11-23 17:11:48] 2025-11-23 23:11:16,564 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:11:48] 2025-11-23 23:11:16,565 | INFO     | ***************************************
[2025-11-23 17:11:48] 2025-11-23 23:11:16,565 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:11:48] 2025-11-23 23:11:16,565 | INFO     | ***************************************
[2025-11-23 17:11:48] 2025-11-23 23:11:16,565 | INFO     | 
[2025-11-23 17:11:48] 2025-11-23 23:11:16,566 | INFO     | architecture information:
[2025-11-23 17:11:48] 2025-11-23 23:11:16,566 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:11:48] 2025-11-23 23:11:16,572 | INFO     | cat /etc/os-release:
[2025-11-23 17:11:48] NAME="CentOS Linux"
[2025-11-23 17:11:48] VERSION="7 (Core)"
[2025-11-23 17:11:48] ID="centos"
[2025-11-23 17:11:48] ID_LIKE="rhel fedora"
[2025-11-23 17:11:48] VERSION_ID="7"
[2025-11-23 17:11:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:11:48] ANSI_COLOR="0;31"
[2025-11-23 17:11:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:11:48] HOME_URL="https://www.centos.org/"
[2025-11-23 17:11:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:11:48] 
[2025-11-23 17:11:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:11:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:11:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:11:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:11:48] 
[2025-11-23 17:11:48] 2025-11-23 23:11:16,572 | INFO     | ***************************************
[2025-11-23 17:11:48] 2025-11-23 23:11:17,075 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-23 17:11:48] 2025-11-23 23:11:17,081 | INFO     | sufficient remaining disk space (3850373169152 B)
[2025-11-23 17:11:48] 2025-11-23 23:11:17,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:11:48] 2025-11-23 23:11:17,082 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:11:48] 2025-11-23 23:11:17,082 | INFO     | update_server=False
[2025-11-23 17:11:48] 2025-11-23 23:11:17,082 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:11:48] 2025-11-23 23:11:17,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:11:48] 2025-11-23 23:11:17,082 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:11:48] 2025-11-23 23:11:17,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:11:48] 2025-11-23 23:11:17,082 | INFO     | aborting loop
[2025-11-23 17:11:48] 2025-11-23 23:11:17,459 | INFO     | all job control threads have been joined
[2025-11-23 17:11:48] 2025-11-23 23:11:17,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:11:48] 2025-11-23 23:11:17,885 | INFO     | all payload control threads have been joined
[2025-11-23 17:11:48] 2025-11-23 23:11:17,957 | INFO     | all data control threads have been joined
[2025-11-23 17:11:48] 2025-11-23 23:11:18,087 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:18,087 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:18,087 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:18,464 | INFO     | [job] control thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:18,553 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:18,824 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:18,890 | INFO     | [payload] control thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:18,963 | INFO     | [data] control thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:19,038 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:19,087 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:11:48] 2025-11-23 23:11:19,388 | INFO     | [job] validate thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:19,431 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:19,442 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:19,477 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:19,553 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:19,695 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:21,088 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:11:48] 2025-11-23 23:11:21,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140469606336320)>', '<ExcThread(monitor, started 140468977395456)>']
[2025-11-23 17:11:48] 2025-11-23 23:11:26,905 | INFO     | all workflow threads have been joined
[2025-11-23 17:11:48] 2025-11-23 23:11:26,905 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:11:48] 2025-11-23 23:11:26,905 | INFO     | traces error code: 0
[2025-11-23 17:11:48] 2025-11-23 23:11:26,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:11:48] 2025-11-23 23:11:48,125 | INFO     | PID=1803182 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 17:11:48] 2025-11-23 23:11:48,126 | INFO     | .. there are 2 such processes running
[2025-11-23 17:11:48] 2025-11-23 23:11:48,126 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:11:48] 2025-11-23 23:11:48,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:11:48] 2025-11-23 23:11:48,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:11:48] 2025-11-23 23:11:48,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:11:48] 2025-11-23 23:11:48,126 | INFO     | [monitor] control thread has ended
[2025-11-23 17:11:48] 2025-11-23 23:11:48,209 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:11:48] 2025-11-23 23:11:48,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:11:48] 2025-11-23 23:11:48,212 [wrapper] pilotpid: 1803182
[2025-11-23 17:11:48] 2025-11-23 23:11:48,213 [wrapper] Pilot exit status: 0
[2025-11-23 17:11:48] 2025-11-23 23:11:48,218 [wrapper] pandaids: 6895337679
[2025-11-23 17:11:48] 2025-11-23 23:11:48,233 [wrapper] cleanup supervisor_pilot 1965372 1803183
[2025-11-23 17:11:48] 2025-11-23 23:11:48,234 [wrapper] Test setup, not cleaning
[2025-11-23 17:11:48] 2025-11-23 23:11:48,235 [wrapper] apfmon messages muted
[2025-11-23 17:11:48] 2025-11-23 23:11:48,236 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:11:48] 2025-11-23 23:11:48,237 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:11:48]  *** Error codes and diagnostics ***
[2025-11-23 17:11:48]     "exeErrorCode": 0,
[2025-11-23 17:11:48]     "exeErrorDiag": "",
[2025-11-23 17:11:48]     "pilotErrorCode": 0,
[2025-11-23 17:11:48]     "pilotErrorDiag": "",
[2025-11-23 17:11:48]  *** Listing of results directory ***
[2025-11-23 17:11:48] total 1289160
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc    576529 Nov 22 01:52 pilot3.tar.gz
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc      5112 Nov 22 02:18 queuedata.json
[2025-11-23 17:11:48] -rwx------. 1 boinc boinc     36292 Nov 22 02:20 runpilot2-wrapper.sh
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc       100 Nov 23 14:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:11:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 14:27 run_atlas
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc       105 Nov 23 14:27 job.xml
[2025-11-23 17:11:48] -rw-r--r--. 2 boinc boinc     15847 Nov 23 14:27 start_atlas.sh
[2025-11-23 17:11:48] drwxrwx--x. 1 boinc boinc        76 Nov 23 14:27 shared
[2025-11-23 17:11:48] -rw-r--r--. 2 boinc boinc    590104 Nov 23 14:27 input.tar.gz
[2025-11-23 17:11:48] -rw-r--r--. 2 boinc boinc 409387440 Nov 23 14:27 EVNT.47483658._000315.pool.root.1
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc         0 Nov 23 14:27 boinc_setup_complete
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc     10032 Nov 23 14:27 init_data.xml
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc         0 Nov 23 14:27 boinc_lockfile
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc      2781 Nov 23 14:27 pandaJob.out
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc        63 Nov 23 14:27 setup.sh.local
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc    989786 Nov 23 14:28 agis_schedconf.cvmfs.json
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc   1526164 Nov 23 14:28 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:11:48] drwx------. 1 boinc boinc       414 Nov 23 14:28 pilot3
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc       531 Nov 23 17:07 boinc_task_state.xml
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc 900045098 Nov 23 17:10 HITS.47556137._003111.pool.root.1
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc      1041 Nov 23 17:11 memory_monitor_summary.json
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc   1932033 Nov 23 17:11 log.47556137._003111.job.log.tgz.1
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc        95 Nov 23 17:11 pilot_heartbeat.json
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc      8592 Nov 23 17:11 heartbeat.json
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc      8192 Nov 23 17:11 boinc_mmap_file
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc        28 Nov 23 17:11 wrapper_checkpoint.txt
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc       822 Nov 23 17:11 pilotlog.txt
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc   1448115 Nov 23 17:11 log.47556137._003111.job.log.1
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc       353 Nov 23 17:11 output.list
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc       620 Nov 23 17:11 runtime_log
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc   3399680 Nov 23 17:11 result.tar.gz
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc      9396 Nov 23 17:11 runtime_log.err
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc       658 Nov 23 17:11 O8sMDmi2xg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmY3JKDmAJ6jDm.diag
[2025-11-23 17:11:48] -rw-r--r--. 1 boinc boinc     21014 Nov 23 17:11 stderr.txt
[2025-11-23 17:11:48] HITS file was successfully produced:
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc 900045098 Nov 23 17:10 shared/HITS.pool.root.1
[2025-11-23 17:11:48]  *** Contents of shared directory: ***
[2025-11-23 17:11:48] total 1282664
[2025-11-23 17:11:48] -rw-r--r--. 2 boinc boinc     15847 Nov 23 14:27 start_atlas.sh
[2025-11-23 17:11:48] -rw-r--r--. 2 boinc boinc    590104 Nov 23 14:27 input.tar.gz
[2025-11-23 17:11:48] -rw-r--r--. 2 boinc boinc 409387440 Nov 23 14:27 ATLAS.root_0
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc 900045098 Nov 23 17:10 HITS.pool.root.1
[2025-11-23 17:11:48] -rw-------. 1 boinc boinc   3399680 Nov 23 17:11 result.tar.gz
17:11:49 (1799291): run_atlas exited; CPU time 113912.560702
17:11:49 (1799291): called boinc_finish(0)

</stderr_txt>
]]>

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