Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:33:41 (22190): wrapper (7.7.26015): starting
11:33:41 (22190): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 11:33:41] Arguments: --nthreads 8
[2025-11-23 11:33:41] Threads: 8
[2025-11-23 11:33:41] Checking for CVMFS
[2025-11-23 11:33:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 11:33:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 11:33:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 11:33:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 11:33:41] 2.11.2.0 21766 113624 141392 153215 0 81 16122183 18432000 1885 130560 0 82129543 99.974 4739002 26894 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 11:33:41] CVMFS is ok
[2025-11-23 11:33:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 11:33:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 11:33:41] Further information can be found at the LHC@home message board.
[2025-11-23 11:33:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:33:41] Checking for apptainer binary...
[2025-11-23 11:33:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 11:33:41] Running /usr/bin/apptainer --version
[2025-11-23 11:33:41] apptainer version 1.3.2-1.el7
[2025-11-23 11:33:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:33:42] c-206-18.aglt2.org
[2025-11-23 11:33:42] apptainer works
[2025-11-23 11:33:42] Set ATHENA_PROC_NUMBER=8
[2025-11-23 11:33:42] Set ATHENA_CORE_NUMBER=8
[2025-11-23 11:33:42] Starting ATLAS job with PandaID=6895348840
[2025-11-23 11:33:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 07:05:55]  *** The last 200 lines of the pilot log: ***
[2025-11-24 07:05:55] 2025-11-24 12:05:04,046 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2566.6666666666665
[2025-11-24 07:05:55] 2025-11-24 12:05:04,051 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895348840/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 07:05:55] 2025-11-24 12:05:04,052 | INFO     | extracted standard info from prmon json
[2025-11-24 07:05:55] 2025-11-24 12:05:04,052 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 07:05:55] 2025-11-24 12:05:04,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 07:05:55] 2025-11-24 12:05:04,082 | INFO     | fitting pss+swap vs Time
[2025-11-24 07:05:55] 2025-11-24 12:05:04,084 | INFO     | sum of square deviations: 474060795544.2917
[2025-11-24 07:05:55] 2025-11-24 12:05:04,112 | INFO     | sum of deviations: 2054545945708.7441
[2025-11-24 07:05:55] 2025-11-24 12:05:04,112 | INFO     | mean x: 1763950765.1050348
[2025-11-24 07:05:55] 2025-11-24 12:05:04,112 | INFO     | mean y: 2868324.026909722
[2025-11-24 07:05:55] 2025-11-24 12:05:04,112 | INFO     | intersect: -7641969483.569825
[2025-11-24 07:05:55] 2025-11-24 12:05:04,113 | INFO     | chi2: 5.91438828755206
[2025-11-24 07:05:55] 2025-11-24 12:05:04,115 | INFO     | sum of square deviations: 467915069637.45233
[2025-11-24 07:05:55] 2025-11-24 12:05:04,138 | INFO     | sum of deviations: 2400915802100.4775
[2025-11-24 07:05:55] 2025-11-24 12:05:04,138 | INFO     | mean x: 1763950612.6076722
[2025-11-24 07:05:55] 2025-11-24 12:05:04,138 | INFO     | mean y: 2876914.0366172623
[2025-11-24 07:05:55] 2025-11-24 12:05:04,139 | INFO     | intersect: -9048117966.75659
[2025-11-24 07:05:55] 2025-11-24 12:05:04,140 | INFO     | chi2: 3.2560231756194247
[2025-11-24 07:05:55] 2025-11-24 12:05:04,140 | INFO     | current chi2=3.2560231756194247 (change=44.947422838768695 %)
[2025-11-24 07:05:55] 2025-11-24 12:05:04,141 | INFO     | sum of square deviations: 461822693568.09814
[2025-11-24 07:05:55] 2025-11-24 12:05:04,164 | INFO     | sum of deviations: 2581091657892.765
[2025-11-24 07:05:55] 2025-11-24 12:05:04,164 | INFO     | mean x: 1763950460.1103327
[2025-11-24 07:05:55] 2025-11-24 12:05:04,164 | INFO     | mean y: 2881422.6129597197
[2025-11-24 07:05:55] 2025-11-24 12:05:04,164 | INFO     | intersect: -9855702577.126183
[2025-11-24 07:05:55] 2025-11-24 12:05:04,165 | INFO     | chi2: 2.4530277003682603
[2025-11-24 07:05:55] 2025-11-24 12:05:04,166 | INFO     | current chi2=2.4530277003682603 (change=24.661847657100992 %)
[2025-11-24 07:05:55] 2025-11-24 12:05:04,166 | INFO     | right removable region: 1141
[2025-11-24 07:05:55] 2025-11-24 12:05:04,168 | INFO     | sum of square deviations: 467914714495.66705
[2025-11-24 07:05:55] 2025-11-24 12:05:04,196 | INFO     | sum of deviations: 1754879093308.8523
[2025-11-24 07:05:55] 2025-11-24 12:05:04,197 | INFO     | mean x: 1763950917.6068003
[2025-11-24 07:05:55] 2025-11-24 12:05:04,197 | INFO     | mean y: 2875751.1726242374
[2025-11-24 07:05:55] 2025-11-24 12:05:04,197 | INFO     | intersect: -6612690058.224046
[2025-11-24 07:05:55] 2025-11-24 12:05:04,199 | INFO     | chi2: 3.8605849405704546
[2025-11-24 07:05:55] 2025-11-24 12:05:04,199 | INFO     | current chi2=3.8605849405704546 (change=34.72554129231285 %)
[2025-11-24 07:05:55] 2025-11-24 12:05:04,201 | INFO     | sum of square deviations: 461821913561.31696
[2025-11-24 07:05:55] 2025-11-24 12:05:04,243 | INFO     | sum of deviations: 1678778782781.3289
[2025-11-24 07:05:55] 2025-11-24 12:05:04,244 | INFO     | mean x: 1763951070.109457
[2025-11-24 07:05:55] 2025-11-24 12:05:04,244 | INFO     | mean y: 2877655.6453590193
[2025-11-24 07:05:55] 2025-11-24 12:05:04,244 | INFO     | intersect: -6409298863.932034
[2025-11-24 07:05:55] 2025-11-24 12:05:04,245 | INFO     | chi2: 3.804950162964291
[2025-11-24 07:05:55] 2025-11-24 12:05:04,246 | INFO     | current chi2=3.804950162964291 (change=1.4410970996002244 %)
[2025-11-24 07:05:55] 2025-11-24 12:05:04,246 | INFO     | left removable region: 20
[2025-11-24 07:05:55] 2025-11-24 12:05:04,247 | INFO     | sum of square deviations: 436810622946.5886
[2025-11-24 07:05:55] 2025-11-24 12:05:04,271 | INFO     | sum of deviations: 2130282504828.883
[2025-11-24 07:05:55] 2025-11-24 12:05:04,272 | INFO     | mean x: 1763951039.6181982
[2025-11-24 07:05:55] 2025-11-24 12:05:04,272 | INFO     | mean y: 2894252.525423729
[2025-11-24 07:05:55] 2025-11-24 12:05:04,272 | INFO     | intersect: -8599721713.462303
[2025-11-24 07:05:55] 2025-11-24 12:05:04,273 | INFO     | chi2: 0.2116082863679242
[2025-11-24 07:05:55] 2025-11-24 12:05:04,273 | INFO     | current memory leak: 4.88 B/s (using 1121 data points, chi2=0.21)
[2025-11-24 07:05:55] 2025-11-24 12:05:04,274 | INFO     | could have reported an average CPU frequency of 2625 MHz (42 samples)
[2025-11-24 07:05:55] 2025-11-24 12:05:04,275 | INFO     | ..............................
[2025-11-24 07:05:55] 2025-11-24 12:05:04,275 | INFO     | . Timing measurements:
[2025-11-24 07:05:55] 2025-11-24 12:05:04,275 | INFO     | . get job = 0 s
[2025-11-24 07:05:55] 2025-11-24 12:05:04,275 | INFO     | . initial setup = 2 s
[2025-11-24 07:05:55] 2025-11-24 12:05:04,275 | INFO     | . payload setup = 5 s
[2025-11-24 07:05:55] 2025-11-24 12:05:04,275 | INFO     | . stage-in = 0 s
[2025-11-24 07:05:55] 2025-11-24 12:05:04,276 | INFO     | . payload execution = 70238 s
[2025-11-24 07:05:55] 2025-11-24 12:05:04,276 | INFO     | . stage-out = 4 s
[2025-11-24 07:05:55] 2025-11-24 12:05:04,276 | INFO     | . log creation = 0 s
[2025-11-24 07:05:55] 2025-11-24 12:05:04,276 | INFO     | ..............................
[2025-11-24 07:05:55] 2025-11-24 12:05:04,447 | INFO     | 
[2025-11-24 07:05:55] 2025-11-24 12:05:04,448 | INFO     | job summary report
[2025-11-24 07:05:55] 2025-11-24 12:05:04,448 | INFO     | --------------------------------------------------
[2025-11-24 07:05:55] 2025-11-24 12:05:04,448 | INFO     | PanDA job id: 6895348840
[2025-11-24 07:05:55] 2025-11-24 12:05:04,448 | INFO     | task id: 47556137
[2025-11-24 07:05:55] 2025-11-24 12:05:04,448 | INFO     | errors: (none)
[2025-11-24 07:05:55] 2025-11-24 12:05:04,449 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 07:05:55] 2025-11-24 12:05:04,449 | INFO     | pilot state: finished 
[2025-11-24 07:05:55] 2025-11-24 12:05:04,449 | INFO     | transexitcode: 0
[2025-11-24 07:05:55] 2025-11-24 12:05:04,449 | INFO     | exeerrorcode: 0
[2025-11-24 07:05:55] 2025-11-24 12:05:04,449 | INFO     | exeerrordiag: 
[2025-11-24 07:05:55] 2025-11-24 12:05:04,449 | INFO     | exitcode: 0
[2025-11-24 07:05:55] 2025-11-24 12:05:04,450 | INFO     | exitmsg: OK
[2025-11-24 07:05:55] 2025-11-24 12:05:04,450 | INFO     | cpuconsumptiontime: 542017 s
[2025-11-24 07:05:55] 2025-11-24 12:05:04,450 | INFO     | nevents: 1000
[2025-11-24 07:05:55] 2025-11-24 12:05:04,450 | INFO     | neventsw: 0
[2025-11-24 07:05:55] 2025-11-24 12:05:04,450 | INFO     | pid: 32485
[2025-11-24 07:05:55] 2025-11-24 12:05:04,450 | INFO     | pgrp: 32485
[2025-11-24 07:05:55] 2025-11-24 12:05:04,450 | INFO     | corecount: 8
[2025-11-24 07:05:55] 2025-11-24 12:05:04,451 | INFO     | event service: False
[2025-11-24 07:05:55] 2025-11-24 12:05:04,451 | INFO     | sizes: {0: 2298585, 1: 2298784, 4: 2299046, 12: 2299074, 70246: 2355760, 70250: 2365545, 70251: 2365729, 70255: 2365975}
[2025-11-24 07:05:55] 2025-11-24 12:05:04,451 | INFO     | --------------------------------------------------
[2025-11-24 07:05:55] 2025-11-24 12:05:04,451 | INFO     | 
[2025-11-24 07:05:55] 2025-11-24 12:05:04,451 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 07:05:55] 2025-11-24 12:05:04,563 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,564 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,564 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,567 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 07:05:55] 2025-11-24 12:05:04,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,568 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 07:05:55] 2025-11-24 12:05:04,568 | INFO     | job 6895348840 has completed (purged errors)
[2025-11-24 07:05:55] 2025-11-24 12:05:04,568 | INFO     | overall cleanup function is called
[2025-11-24 07:05:55] 2025-11-24 12:05:04,683 | INFO     | PID=25886 has CPU usage=17.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 07:05:55] 2025-11-24 12:05:04,683 | INFO     | .. there are 3 such processes running
[2025-11-24 07:05:55] 2025-11-24 12:05:05,590 | INFO     | --- collectZombieJob: --- 10, [32485]
[2025-11-24 07:05:55] 2025-11-24 12:05:05,590 | INFO     | zombie collector waiting for pid 32485
[2025-11-24 07:05:55] 2025-11-24 12:05:05,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 07:05:55] 2025-11-24 12:05:05,590 | INFO     | collected zombie processes
[2025-11-24 07:05:55] 2025-11-24 12:05:05,591 | INFO     | will attempt to kill all subprocesses of pid=32485
[2025-11-24 07:05:55] 2025-11-24 12:05:05,765 | INFO     | process IDs to be killed: [32485] (in reverse order)
[2025-11-24 07:05:55] 2025-11-24 12:05:05,825 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 07:05:55] 2025-11-24 12:05:05,826 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 07:05:55] 2025-11-24 12:05:05,831 | INFO     | did not find any defunct processes belonging to 32485
[2025-11-24 07:05:55] 2025-11-24 12:05:05,836 | INFO     | did not find any defunct processes belonging to 32485
[2025-11-24 07:05:55] 2025-11-24 12:05:05,838 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 07:05:55] 2025-11-24 12:05:05,838 | INFO     | ready for new job
[2025-11-24 07:05:55] 2025-11-24 12:05:05,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 07:05:55] 2025-11-24 12:05:05,844 | INFO     | ***************************************
[2025-11-24 07:05:55] 2025-11-24 12:05:05,844 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 07:05:55] 2025-11-24 12:05:05,844 | INFO     | ***************************************
[2025-11-24 07:05:55] 2025-11-24 12:05:05,844 | INFO     | 
[2025-11-24 07:05:55] 2025-11-24 12:05:05,845 | INFO     | architecture information:
[2025-11-24 07:05:55] 2025-11-24 12:05:05,846 | INFO     | executing command: cat /etc/os-release
[2025-11-24 07:05:55] 2025-11-24 12:05:05,861 | INFO     | cat /etc/os-release:
[2025-11-24 07:05:55] NAME="CentOS Linux"
[2025-11-24 07:05:55] VERSION="7 (Core)"
[2025-11-24 07:05:55] ID="centos"
[2025-11-24 07:05:55] ID_LIKE="rhel fedora"
[2025-11-24 07:05:55] VERSION_ID="7"
[2025-11-24 07:05:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 07:05:55] ANSI_COLOR="0;31"
[2025-11-24 07:05:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 07:05:55] HOME_URL="https://www.centos.org/"
[2025-11-24 07:05:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 07:05:55] 
[2025-11-24 07:05:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 07:05:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 07:05:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 07:05:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 07:05:55] 
[2025-11-24 07:05:55] 2025-11-24 12:05:05,861 | INFO     | ***************************************
[2025-11-24 07:05:55] 2025-11-24 12:05:06,365 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 07:05:55] 2025-11-24 12:05:06,378 | INFO     | sufficient remaining disk space (25692209152 B)
[2025-11-24 07:05:55] 2025-11-24 12:05:06,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 07:05:55] 2025-11-24 12:05:06,379 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 07:05:55] 2025-11-24 12:05:06,379 | INFO     | update_server=False
[2025-11-24 07:05:55] 2025-11-24 12:05:06,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 07:05:55] 2025-11-24 12:05:06,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:05:55] 2025-11-24 12:05:06,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 07:05:55] 2025-11-24 12:05:06,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 07:05:55] 2025-11-24 12:05:06,528 | INFO     | all payload control threads have been joined
[2025-11-24 07:05:55] 2025-11-24 12:05:06,864 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 07:05:55] 2025-11-24 12:05:06,864 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 07:05:55] 2025-11-24 12:05:06,879 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:05:55] 2025-11-24 12:05:06,880 | INFO     | will abort loop
[2025-11-24 07:05:55] 2025-11-24 12:05:07,119 | INFO     | all job control threads have been joined
[2025-11-24 07:05:55] 2025-11-24 12:05:07,334 | INFO     | all data control threads have been joined
[2025-11-24 07:05:55] 2025-11-24 12:05:07,384 | INFO     | [job] retrieve thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:07,384 | INFO     | [job] queue monitor thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:07,386 | INFO     | [payload] failed_post thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:07,430 | INFO     | [job] validate thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:07,534 | INFO     | [payload] control thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:07,633 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:07,885 | INFO     | [job] job monitor thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:08,124 | INFO     | [job] control thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:08,340 | INFO     | [data] control thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:08,385 | INFO     | [data] copytool_out thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:08,437 | INFO     | [payload] validate_post thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:08,478 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:08,608 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:08,849 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:08,849 | INFO     | [data] copytool_in thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:10,430 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 07:05:55] 2025-11-24 12:05:36,973 | INFO     | PID=25886 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 07:05:55] 2025-11-24 12:05:36,974 | INFO     | .. there are 3 such processes running
[2025-11-24 07:05:55] 2025-11-24 12:05:36,974 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 07:05:55] 2025-11-24 12:05:36,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 07:05:55] 2025-11-24 12:05:36,974 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 07:05:55] 2025-11-24 12:05:49,966 | INFO     | [monitor] cgroup control has ended
[2025-11-24 07:05:55] 2025-11-24 12:05:50,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139992778446656)>', '<ExcThread(monitor, started 139992336672512)>']
[2025-11-24 07:05:55] 2025-11-24 12:05:51,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 07:05:55] 2025-11-24 12:05:51,041 | INFO     | [monitor] control thread has ended
[2025-11-24 07:05:55] 2025-11-24 12:05:55,338 | INFO     | all workflow threads have been joined
[2025-11-24 07:05:55] 2025-11-24 12:05:55,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 07:05:55] 2025-11-24 12:05:55,338 | INFO     | traces error code: 0
[2025-11-24 07:05:55] 2025-11-24 12:05:55,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 07:05:55] 2025-11-24 12:05:55,428 [wrapper] ==== pilot stdout END ====
[2025-11-24 07:05:55] 2025-11-24 12:05:55,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 07:05:55] 2025-11-24 12:05:55,432 [wrapper] pilotpid: 25886
[2025-11-24 07:05:55] 2025-11-24 12:05:55,434 [wrapper] Pilot exit status: 0
[2025-11-24 07:05:55] 2025-11-24 12:05:55,443 [wrapper] pandaids: 6895348840
[2025-11-24 07:05:55] 2025-11-24 12:05:55,473 [wrapper] cleanup supervisor_pilot 20943 25887
[2025-11-24 07:05:55] 2025-11-24 12:05:55,476 [wrapper] Test setup, not cleaning
[2025-11-24 07:05:55] 2025-11-24 12:05:55,478 [wrapper] apfmon messages muted
[2025-11-24 07:05:55] 2025-11-24 12:05:55,480 [wrapper] ==== wrapper stdout END ====
[2025-11-24 07:05:55] 2025-11-24 12:05:55,481 [wrapper] ==== wrapper stderr END ====
[2025-11-24 07:05:55]  *** Error codes and diagnostics ***
[2025-11-24 07:05:55]     "exeErrorCode": 0,
[2025-11-24 07:05:55]     "exeErrorDiag": "",
[2025-11-24 07:05:55]     "pilotErrorCode": 0,
[2025-11-24 07:05:55]     "pilotErrorDiag": "",
[2025-11-24 07:05:55]  *** Listing of results directory ***
[2025-11-24 07:05:55] total 1332684
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 14:59 queuedata.json
[2025-11-24 07:05:55] -rwx------ 1 boincer umatlas     36292 Nov 22 15:00 runpilot2-wrapper.sh
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas       100 Nov 23 11:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 07:05:55] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 11:33 run_atlas
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas       105 Nov 23 11:33 job.xml
[2025-11-24 07:05:55] -rw-r--r-- 2 boincer umatlas 410161861 Nov 23 11:33 EVNT.47483658._000484.pool.root.1
[2025-11-24 07:05:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 11:33 start_atlas.sh
[2025-11-24 07:05:55] drwxrwx--x 2 boincer umatlas      4096 Nov 23 11:33 shared
[2025-11-24 07:05:55] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 11:33 input.tar.gz
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas         0 Nov 23 11:33 boinc_lockfile
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 11:33 pandaJob.out
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas        57 Nov 23 11:33 setup.sh.local
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas    989785 Nov 23 11:33 agis_schedconf.cvmfs.json
[2025-11-24 07:05:55] drwx------ 5 boincer umatlas      4096 Nov 23 11:33 pilot3
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas       532 Nov 24 06:51 boinc_task_state.xml
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas 926459080 Nov 24 07:04 HITS.47556137._004796.pool.root.1
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas      5954 Nov 24 07:04 init_data.xml
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas        95 Nov 24 07:04 pilot_heartbeat.json
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas      1068 Nov 24 07:04 memory_monitor_summary.json
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas   1516227 Nov 24 07:04 agis_ddmendpoints.agis.ALL.json
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas   2332786 Nov 24 07:04 log.47556137._004796.job.log.tgz.1
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas      8676 Nov 24 07:05 heartbeat.json
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas        29 Nov 24 07:05 wrapper_checkpoint.txt
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 07:05 boinc_mmap_file
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas      5007 Nov 24 07:05 pilotlog.txt
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas   9733288 Nov 24 07:05 log.47556137._004796.job.log.1
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas       353 Nov 24 07:05 output.list
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas       620 Nov 24 07:05 runtime_log
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas  12083200 Nov 24 07:05 result.tar.gz
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas       668 Nov 24 07:05 USXLDmvx8g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlMKKDmdlKB0n.diag
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 07:05 runtime_log.err
[2025-11-24 07:05:55] -rw-r--r-- 1 boincer umatlas     21390 Nov 24 07:05 stderr.txt
[2025-11-24 07:05:55] HITS file was successfully produced:
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas 926459080 Nov 24 07:04 shared/HITS.pool.root.1
[2025-11-24 07:05:55]  *** Contents of shared directory: ***
[2025-11-24 07:05:55] total 1317700
[2025-11-24 07:05:55] -rw-r--r-- 2 boincer umatlas 410161861 Nov 23 11:33 ATLAS.root_0
[2025-11-24 07:05:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 11:33 start_atlas.sh
[2025-11-24 07:05:55] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 11:33 input.tar.gz
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas 926459080 Nov 24 07:04 HITS.pool.root.1
[2025-11-24 07:05:55] -rw------- 1 boincer umatlas  12083200 Nov 24 07:05 result.tar.gz
07:05:57 (22190): run_atlas exited; CPU time 540826.962431
07:05:57 (22190): called boinc_finish(0)

</stderr_txt>
]]>

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