Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:35:57 (1374260): wrapper (7.7.26015): starting
10:35:57 (1374260): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 10:35:57] Arguments: --nthreads 12
[2025-11-26 10:35:57] Threads: 12
[2025-11-26 10:35:57] Checking for CVMFS
[2025-11-26 10:35:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:35:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:35:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:35:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:35:58] 2.13.3.0 9682 27095 135748 153316 1 89 33174624 46080001 697 130560 0 16056296 99.945 1737634 13764 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-26 10:35:58] CVMFS is ok
[2025-11-26 10:35:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:35:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:35:58] Further information can be found at the LHC@home message board.
[2025-11-26 10:35:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:35:58] Checking for apptainer binary...
[2025-11-26 10:35:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:35:58] Running /usr/bin/apptainer --version
[2025-11-26 10:35:58] apptainer version 1.4.3-1.el9
[2025-11-26 10:35:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:35:58] minis01.farm.particle.cz
[2025-11-26 10:35:58] apptainer works
[2025-11-26 10:35:58] Set ATHENA_PROC_NUMBER=12
[2025-11-26 10:35:58] Set ATHENA_CORE_NUMBER=12
[2025-11-26 10:35:58] Starting ATLAS job with PandaID=6894052092
[2025-11-26 10:35:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:36:21]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:36:21] 2025-11-26 11:35:39,519 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2691.8018437500004
[2025-11-26 12:36:21] 2025-11-26 11:35:39,524 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6894052092/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:36:21] 2025-11-26 11:35:39,524 | INFO     | extracted standard info from prmon json
[2025-11-26 12:36:21] 2025-11-26 11:35:39,524 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:36:21] 2025-11-26 11:35:39,524 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:36:21] 2025-11-26 11:35:39,525 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 12:36:21] 2025-11-26 11:35:39,525 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 12:36:21] 2025-11-26 11:35:39,527 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:36:21] 2025-11-26 11:35:39,527 | INFO     | sum of square deviations: 509440249.5
[2025-11-26 12:36:21] 2025-11-26 11:35:39,527 | INFO     | sum of deviations: -18309629826.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,527 | INFO     | mean x: 1764153357.5
[2025-11-26 12:36:21] 2025-11-26 11:35:39,528 | INFO     | mean y: 2859954.2711864407
[2025-11-26 12:36:21] 2025-11-26 11:35:39,528 | INFO     | intersect: 63407734154.57726
[2025-11-26 12:36:21] 2025-11-26 11:35:39,528 | INFO     | chi2: 2.105005622246323
[2025-11-26 12:36:21] 2025-11-26 11:35:39,528 | INFO     | sum of square deviations: 447383272.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,529 | INFO     | sum of deviations: -8942450244.999998
[2025-11-26 12:36:21] 2025-11-26 11:35:39,529 | INFO     | mean x: 1764153205.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,529 | INFO     | mean y: 2882276.0265486725
[2025-11-26 12:36:21] 2025-11-26 11:35:39,529 | INFO     | intersect: 35265381452.056946
[2025-11-26 12:36:21] 2025-11-26 11:35:39,529 | INFO     | chi2: 1.4196820607825482
[2025-11-26 12:36:21] 2025-11-26 11:35:39,529 | INFO     | current chi2=1.4196820607825482 (change=32.55685183075392 %)
[2025-11-26 12:36:21] 2025-11-26 11:35:39,529 | INFO     | sum of square deviations: 390582207.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,530 | INFO     | sum of deviations: -7944252467.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,530 | INFO     | mean x: 1764153052.5
[2025-11-26 12:36:21] 2025-11-26 11:35:39,530 | INFO     | mean y: 2884959.1481481483
[2025-11-26 12:36:21] 2025-11-26 11:35:39,530 | INFO     | intersect: 35884901570.02952
[2025-11-26 12:36:21] 2025-11-26 11:35:39,530 | INFO     | chi2: 1.4189627412524282
[2025-11-26 12:36:21] 2025-11-26 11:35:39,530 | INFO     | current chi2=1.4189627412524282 (change=0.05066764946818841 %)
[2025-11-26 12:36:21] 2025-11-26 11:35:39,530 | INFO     | right removable region: 107
[2025-11-26 12:36:21] 2025-11-26 11:35:39,531 | INFO     | sum of square deviations: 447383272.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,531 | INFO     | sum of deviations: -34969145602.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,531 | INFO     | mean x: 1764153510.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,531 | INFO     | mean y: 2900067.9734513275
[2025-11-26 12:36:21] 2025-11-26 11:35:39,531 | INFO     | intersect: 137895719975.35114
[2025-11-26 12:36:21] 2025-11-26 11:35:39,531 | INFO     | chi2: 0.8813651965777682
[2025-11-26 12:36:21] 2025-11-26 11:35:39,531 | INFO     | current chi2=0.8813651965777682 (change=58.130031233017164 %)
[2025-11-26 12:36:21] 2025-11-26 11:35:39,532 | INFO     | sum of square deviations: 390582207.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,532 | INFO     | sum of deviations: -31188541190.500008
[2025-11-26 12:36:21] 2025-11-26 11:35:39,532 | INFO     | mean x: 1764153662.5
[2025-11-26 12:36:21] 2025-11-26 11:35:39,532 | INFO     | mean y: 2889865.638888889
[2025-11-26 12:36:21] 2025-11-26 11:35:39,532 | INFO     | intersect: 140873052876.55325
[2025-11-26 12:36:21] 2025-11-26 11:35:39,533 | INFO     | chi2: 0.8814048217364702
[2025-11-26 12:36:21] 2025-11-26 11:35:39,533 | INFO     | current chi2=0.8814048217364702 (change=-0.0044958842096088705 %)
[2025-11-26 12:36:21] 2025-11-26 11:35:39,533 | INFO     | left removable region: 20
[2025-11-26 12:36:21] 2025-11-26 11:35:39,533 | INFO     | sum of square deviations: 204163828.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,533 | INFO     | sum of deviations: -12423201989.000004
[2025-11-26 12:36:21] 2025-11-26 11:35:39,533 | INFO     | mean x: 1764153632.0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,533 | INFO     | mean y: 2890570.8505747127
[2025-11-26 12:36:21] 2025-11-26 11:35:39,533 | INFO     | intersect: 107350196529.2987
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | chi2: 0.14102163448242533
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | current memory leak: -60.85 B/s (using 87 data points, chi2=0.14)
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | could have reported an average CPU frequency of 2745 MHz (7 samples)
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | ..............................
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | . Timing measurements:
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | . get job = 0 s
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | . initial setup = 1 s
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | . payload setup = 4 s
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | . stage-in = 0 s
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | . payload execution = 7145 s
[2025-11-26 12:36:21] 2025-11-26 11:35:39,534 | INFO     | . stage-out = 0 s
[2025-11-26 12:36:21] 2025-11-26 11:35:39,535 | INFO     | . log creation = 0 s
[2025-11-26 12:36:21] 2025-11-26 11:35:39,535 | INFO     | ..............................
[2025-11-26 12:36:21] 2025-11-26 11:35:39,606 | INFO     | 
[2025-11-26 12:36:21] 2025-11-26 11:35:39,606 | INFO     | job summary report
[2025-11-26 12:36:21] 2025-11-26 11:35:39,606 | INFO     | --------------------------------------------------
[2025-11-26 12:36:21] 2025-11-26 11:35:39,606 | INFO     | PanDA job id: 6894052092
[2025-11-26 12:36:21] 2025-11-26 11:35:39,606 | INFO     | task id: 47523659
[2025-11-26 12:36:21] 2025-11-26 11:35:39,606 | INFO     | errors: (none)
[2025-11-26 12:36:21] 2025-11-26 11:35:39,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:36:21] 2025-11-26 11:35:39,607 | INFO     | pilot state: finished 
[2025-11-26 12:36:21] 2025-11-26 11:35:39,607 | INFO     | transexitcode: 0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,607 | INFO     | exeerrorcode: 0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,607 | INFO     | exeerrordiag: 
[2025-11-26 12:36:21] 2025-11-26 11:35:39,607 | INFO     | exitcode: 0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,607 | INFO     | exitmsg: OK
[2025-11-26 12:36:21] 2025-11-26 11:35:39,607 | INFO     | cpuconsumptiontime: 80602 s
[2025-11-26 12:36:21] 2025-11-26 11:35:39,607 | INFO     | nevents: 400
[2025-11-26 12:36:21] 2025-11-26 11:35:39,608 | INFO     | neventsw: 0
[2025-11-26 12:36:21] 2025-11-26 11:35:39,608 | INFO     | pid: 1384825
[2025-11-26 12:36:21] 2025-11-26 11:35:39,608 | INFO     | pgrp: 1384825
[2025-11-26 12:36:21] 2025-11-26 11:35:39,608 | INFO     | corecount: 12
[2025-11-26 12:36:21] 2025-11-26 11:35:39,608 | INFO     | event service: False
[2025-11-26 12:36:21] 2025-11-26 11:35:39,608 | INFO     | sizes: {0: 2283950, 4: 2284212, 11: 2284240, 7153: 2311625, 7154: 2320679, 7159: 2320817}
[2025-11-26 12:36:21] 2025-11-26 11:35:39,608 | INFO     | --------------------------------------------------
[2025-11-26 12:36:21] 2025-11-26 11:35:39,608 | INFO     | 
[2025-11-26 12:36:21] 2025-11-26 11:35:39,608 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-26 12:36:21] 2025-11-26 11:35:39,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,629 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:36:21] 2025-11-26 11:35:39,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:36:21] 2025-11-26 11:35:39,630 | INFO     | job 6894052092 has completed (purged errors)
[2025-11-26 12:36:21] 2025-11-26 11:35:39,630 | INFO     | overall cleanup function is called
[2025-11-26 12:36:21] 2025-11-26 11:35:40,639 | INFO     | --- collectZombieJob: --- 10, [1384825]
[2025-11-26 12:36:21] 2025-11-26 11:35:40,639 | INFO     | zombie collector waiting for pid 1384825
[2025-11-26 12:36:21] 2025-11-26 11:35:40,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:36:21] 2025-11-26 11:35:40,639 | INFO     | collected zombie processes
[2025-11-26 12:36:21] 2025-11-26 11:35:40,639 | INFO     | will attempt to kill all subprocesses of pid=1384825
[2025-11-26 12:36:21] 2025-11-26 11:35:40,781 | INFO     | process IDs to be killed: [1384825] (in reverse order)
[2025-11-26 12:36:21] 2025-11-26 11:35:40,834 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:36:21] 2025-11-26 11:35:40,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:36:21] 2025-11-26 11:35:40,839 | INFO     | did not find any defunct processes belonging to 1384825
[2025-11-26 12:36:21] 2025-11-26 11:35:40,843 | INFO     | did not find any defunct processes belonging to 1384825
[2025-11-26 12:36:21] 2025-11-26 11:35:40,844 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:36:21] 2025-11-26 11:35:40,844 | INFO     | ready for new job
[2025-11-26 12:36:21] 2025-11-26 11:35:40,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:36:21] 2025-11-26 11:35:40,846 | INFO     | ***************************************
[2025-11-26 12:36:21] 2025-11-26 11:35:40,846 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:36:21] 2025-11-26 11:35:40,846 | INFO     | ***************************************
[2025-11-26 12:36:21] 2025-11-26 11:35:40,846 | INFO     | 
[2025-11-26 12:36:21] 2025-11-26 11:35:40,848 | INFO     | architecture information:
[2025-11-26 12:36:21] 2025-11-26 11:35:40,848 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:36:21] 2025-11-26 11:35:40,862 | INFO     | cat /etc/os-release:
[2025-11-26 12:36:21] NAME="CentOS Linux"
[2025-11-26 12:36:21] VERSION="7 (Core)"
[2025-11-26 12:36:21] ID="centos"
[2025-11-26 12:36:21] ID_LIKE="rhel fedora"
[2025-11-26 12:36:21] VERSION_ID="7"
[2025-11-26 12:36:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:36:21] ANSI_COLOR="0;31"
[2025-11-26 12:36:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:36:21] HOME_URL="https://www.centos.org/"
[2025-11-26 12:36:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:36:21] 
[2025-11-26 12:36:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:36:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:36:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:36:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:36:21] 
[2025-11-26 12:36:21] 2025-11-26 11:35:40,862 | INFO     | ***************************************
[2025-11-26 12:36:21] 2025-11-26 11:35:41,365 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-26 12:36:21] 2025-11-26 11:35:41,381 | INFO     | sufficient remaining disk space (63565725696 B)
[2025-11-26 12:36:21] 2025-11-26 11:35:41,381 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:36:21] 2025-11-26 11:35:41,381 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:36:21] 2025-11-26 11:35:41,381 | INFO     | update_server=False
[2025-11-26 12:36:21] 2025-11-26 11:35:41,381 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:36:21] 2025-11-26 11:35:41,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:36:21] 2025-11-26 11:35:41,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:36:21] 2025-11-26 11:35:41,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:36:21] 2025-11-26 11:35:41,382 | INFO     | aborting loop
[2025-11-26 12:36:21] 2025-11-26 11:35:41,815 | INFO     | all data control threads have been joined
[2025-11-26 12:36:21] 2025-11-26 11:35:41,916 | INFO     | all payload control threads have been joined
[2025-11-26 12:36:21] 2025-11-26 11:35:42,387 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:42,388 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:42,388 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:42,485 | INFO     | all job control threads have been joined
[2025-11-26 12:36:21] 2025-11-26 11:35:42,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:36:21] 2025-11-26 11:35:42,575 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:42,724 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:42,820 | INFO     | [data] control thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:42,922 | INFO     | [payload] control thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:43,106 | INFO     | [job] validate thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:43,336 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:43,376 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:43,485 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:43,491 | INFO     | [job] control thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:43,697 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:44,506 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:45,388 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:35:51,590 | INFO     | job.realtimelogging is not enabled
[2025-11-26 12:36:21] 2025-11-26 11:35:52,595 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:36:21] 2025-11-26 11:36:04,362 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-11-26 12:36:21] 2025-11-26 11:36:11,227 | INFO     | PID=1378140 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:36:21] 2025-11-26 11:36:11,227 | INFO     | .. there are 2 such processes running
[2025-11-26 12:36:21] 2025-11-26 11:36:11,228 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:36:21] 2025-11-26 11:36:11,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:36:21] 2025-11-26 11:36:11,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:36:21] 2025-11-26 11:36:16,563 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:36:21] 2025-11-26 11:36:16,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139779564865344)>', '<ExcThread(monitor, started 139779056310016)>']
[2025-11-26 12:36:21] 2025-11-26 11:36:17,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:36:21] 2025-11-26 11:36:17,259 | INFO     | [monitor] control thread has ended
[2025-11-26 12:36:21] 2025-11-26 11:36:21,731 | INFO     | all workflow threads have been joined
[2025-11-26 12:36:21] 2025-11-26 11:36:21,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:36:21] 2025-11-26 11:36:21,731 | INFO     | traces error code: 0
[2025-11-26 12:36:21] 2025-11-26 11:36:21,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:36:21] 2025-11-26 11:36:21,840 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:36:21] 2025-11-26 11:36:21,843 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:36:21] 2025-11-26 11:36:21,845 [wrapper] pilotpid: 1378140
[2025-11-26 12:36:21] 2025-11-26 11:36:21,848 [wrapper] Pilot exit status: 0
[2025-11-26 12:36:21] 2025-11-26 11:36:21,858 [wrapper] pandaids: 6894052092
[2025-11-26 12:36:21] 2025-11-26 11:36:21,893 [wrapper] cleanup supervisor_pilot 1492996 1378141
[2025-11-26 12:36:21] 2025-11-26 11:36:21,896 [wrapper] Test setup, not cleaning
[2025-11-26 12:36:21] 2025-11-26 11:36:21,899 [wrapper] apfmon messages muted
[2025-11-26 12:36:21] 2025-11-26 11:36:21,901 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:36:21] 2025-11-26 11:36:21,904 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:36:21]  *** Error codes and diagnostics ***
[2025-11-26 12:36:21]     "exeErrorCode": 0,
[2025-11-26 12:36:21]     "exeErrorDiag": "",
[2025-11-26 12:36:21]     "pilotErrorCode": 0,
[2025-11-26 12:36:21]     "pilotErrorDiag": "",
[2025-11-26 12:36:21]  *** Listing of results directory ***
[2025-11-26 12:36:21] total 613056
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc    576529 Nov 22 08:52 pilot3.tar.gz
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc      5112 Nov 22 09:23 queuedata.json
[2025-11-26 12:36:21] -rwx------. 1 boinc boinc     36292 Nov 22 09:24 runpilot2-wrapper.sh
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc       100 Nov 26 10:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:36:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 10:35 run_atlas
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc       105 Nov 26 10:35 job.xml
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc      6518 Nov 26 10:35 init_data.xml
[2025-11-26 12:36:21] -rw-r--r--. 2 boinc boinc 302695544 Nov 26 10:35 EVNT.47523657._000003.pool.root.1
[2025-11-26 12:36:21] -rw-r--r--. 2 boinc boinc     15847 Nov 26 10:35 start_atlas.sh
[2025-11-26 12:36:21] drwxrwx--x. 2 boinc boinc      4096 Nov 26 10:35 shared
[2025-11-26 12:36:21] -rw-r--r--. 2 boinc boinc    589948 Nov 26 10:35 input.tar.gz
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc         0 Nov 26 10:35 boinc_lockfile
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc      2613 Nov 26 10:35 pandaJob.out
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc    991827 Nov 26 10:36 agis_schedconf.cvmfs.json
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc   1516240 Nov 26 10:36 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:36:21] drwx------. 5 boinc boinc      4096 Nov 26 10:36 pilot3
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc       529 Nov 26 12:34 boinc_task_state.xml
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc 318228540 Nov 26 12:34 HITS.47523659._000066.pool.root.1
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc      1022 Nov 26 12:35 memory_monitor_summary.json
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc    425287 Nov 26 12:35 log.47523659._000066.job.log.tgz.1
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc      7772 Nov 26 12:35 heartbeat.json
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc        95 Nov 26 12:36 pilot_heartbeat.json
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc      8192 Nov 26 12:36 boinc_mmap_file
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc        27 Nov 26 12:36 wrapper_checkpoint.txt
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc      4895 Nov 26 12:36 pilotlog.txt
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc   1040133 Nov 26 12:36 log.47523659._000066.job.log.1
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc       357 Nov 26 12:36 output.list
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc       620 Nov 26 12:36 runtime_log
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc   1484800 Nov 26 12:36 result.tar.gz
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc      8864 Nov 26 12:36 runtime_log.err
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc       664 Nov 26 12:36 1BIMDmg5xg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml3JKDmmhwtjm.diag
[2025-11-26 12:36:21] -rw-r--r--. 1 boinc boinc     21165 Nov 26 12:36 stderr.txt
[2025-11-26 12:36:21] HITS file was successfully produced:
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc 318228540 Nov 26 12:34 shared/HITS.pool.root.1
[2025-11-26 12:36:21]  *** Contents of shared directory: ***
[2025-11-26 12:36:21] total 608432
[2025-11-26 12:36:21] -rw-r--r--. 2 boinc boinc 302695544 Nov 26 10:35 ATLAS.root_0
[2025-11-26 12:36:21] -rw-r--r--. 2 boinc boinc     15847 Nov 26 10:35 start_atlas.sh
[2025-11-26 12:36:21] -rw-r--r--. 2 boinc boinc    589948 Nov 26 10:35 input.tar.gz
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc 318228540 Nov 26 12:34 HITS.pool.root.1
[2025-11-26 12:36:21] -rw-------. 1 boinc boinc   1484800 Nov 26 12:36 result.tar.gz
12:36:23 (1374260): run_atlas exited; CPU time 80727.141239
12:36:23 (1374260): called boinc_finish(0)

</stderr_txt>
]]>

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