Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:41:39 (2891563): wrapper (7.7.26015): starting
10:41:39 (2891563): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 10:41:39] Arguments: --nthreads 4
[2025-11-26 10:41:39] Threads: 4
[2025-11-26 10:41:39] Checking for CVMFS
[2025-11-26 10:41:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:41:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:41:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:41:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:41:39] 2.9.2.0 1682378 8270 96408 153316 2 81 27335138 36864000 0 130560 0 3486509 99.982 281683 6634 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 10:41:39] CVMFS is ok
[2025-11-26 10:41:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:41:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:41:39] Further information can be found at the LHC@home message board.
[2025-11-26 10:41:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:41:39] Checking for apptainer binary...
[2025-11-26 10:41:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:41:39] Running /usr/bin/apptainer --version
[2025-11-26 10:41:39] apptainer version 1.4.1-1.1
[2025-11-26 10:41:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:41:39] thA315b
[2025-11-26 10:41:39] apptainer works
[2025-11-26 10:41:39] Set ATHENA_PROC_NUMBER=4
[2025-11-26 10:41:39] Set ATHENA_CORE_NUMBER=4
[2025-11-26 10:41:39] Starting ATLAS job with PandaID=6895348301
[2025-11-26 10:41:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:46:19]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:46:19] 2025-11-26 15:45:40,290 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:46:19] 2025-11-26 15:45:40,290 | INFO     | ***************************************
[2025-11-26 16:46:19] 2025-11-26 15:45:40,290 | INFO     | 
[2025-11-26 16:46:19] 2025-11-26 15:45:40,291 | INFO     | architecture information:
[2025-11-26 16:46:19] 2025-11-26 15:45:40,291 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:46:19] 2025-11-26 15:45:40,301 | INFO     | cat /etc/os-release:
[2025-11-26 16:46:19] NAME="CentOS Linux"
[2025-11-26 16:46:19] VERSION="7 (Core)"
[2025-11-26 16:46:19] ID="centos"
[2025-11-26 16:46:19] ID_LIKE="rhel fedora"
[2025-11-26 16:46:19] VERSION_ID="7"
[2025-11-26 16:46:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:46:19] ANSI_COLOR="0;31"
[2025-11-26 16:46:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:46:19] HOME_URL="https://www.centos.org/"
[2025-11-26 16:46:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:46:19] 
[2025-11-26 16:46:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:46:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:46:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:46:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:46:19] 
[2025-11-26 16:46:19] 2025-11-26 15:45:40,302 | INFO     | ***************************************
[2025-11-26 16:46:19] 2025-11-26 15:45:40,805 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 16:46:19] 2025-11-26 15:45:40,819 | INFO     | sufficient remaining disk space (328585969664 B)
[2025-11-26 16:46:19] 2025-11-26 15:45:40,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:46:19] 2025-11-26 15:45:40,819 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:46:19] 2025-11-26 15:45:40,819 | INFO     | update_server=False
[2025-11-26 16:46:19] 2025-11-26 15:45:40,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:46:19] 2025-11-26 15:45:40,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:46:19] 2025-11-26 15:45:40,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:46:19] 2025-11-26 15:45:40,820 | INFO     | aborting loop
[2025-11-26 16:46:19] 2025-11-26 15:45:41,007 | INFO     | all data control threads have been joined
[2025-11-26 16:46:19] 2025-11-26 15:45:41,685 | INFO     | all payload control threads have been joined
[2025-11-26 16:46:19] 2025-11-26 15:45:41,822 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:41,825 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:41,825 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:41,945 | INFO     | all job control threads have been joined
[2025-11-26 16:46:19] 2025-11-26 15:45:42,013 | INFO     | [data] control thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:42,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:46:19] 2025-11-26 15:45:42,455 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:42,691 | INFO     | [payload] control thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:42,929 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:42,949 | INFO     | [job] control thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:43,006 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:43,013 | INFO     | [job] validate thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:43,149 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:43,154 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:43,220 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:44,253 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:44,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:46:19] 2025-11-26 15:45:48,293 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:45:51,391 | INFO     | job.realtimelogging is not enabled
[2025-11-26 16:46:19] 2025-11-26 15:45:52,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:46:19] 2025-11-26 15:46:11,442 | INFO     | PID=2895360 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 16:46:19] 2025-11-26 15:46:11,442 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:46:19] 2025-11-26 15:46:11,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:46:19] 2025-11-26 15:46:11,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:46:19] 2025-11-26 15:46:12,735 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:46:19] 2025-11-26 15:46:14,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251774486336)>', '<ExcThread(monitor, started 140251150415616)>']
[2025-11-26 16:46:19] 2025-11-26 15:46:14,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:46:19] 2025-11-26 15:46:14,459 | INFO     | [monitor] control thread has ended
[2025-11-26 16:46:19] 2025-11-26 15:46:19,110 | INFO     | all workflow threads have been joined
[2025-11-26 16:46:19] 2025-11-26 15:46:19,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:46:19] 2025-11-26 15:46:19,110 | INFO     | traces error code: 0
[2025-11-26 16:46:19] 2025-11-26 15:46:19,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:46:19] 2025-11-26 15:46:19,167 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:46:19] 2025-11-26 15:46:19,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:46:19] 2025-11-26 15:46:19,172 [wrapper] pilotpid: 2895360
[2025-11-26 16:46:19] 2025-11-26 15:46:19,174 [wrapper] Pilot exit status: 0
[2025-11-26 16:46:19] 2025-11-26 15:46:19,182 [wrapper] pandaids: 6895348301
[2025-11-26 16:46:19] 2025-11-26 15:46:19,200 [wrapper] cleanup supervisor_pilot 2940612 2895361
[2025-11-26 16:46:19] 2025-11-26 15:46:19,203 [wrapper] Test setup, not cleaning
[2025-11-26 16:46:19] 2025-11-26 15:46:19,206 [wrapper] apfmon messages muted
[2025-11-26 16:46:19] 2025-11-26 15:46:19,208 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:46:19] 2025-11-26 15:46:19,211 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:46:19]  *** Error codes and diagnostics ***
[2025-11-26 16:46:19]     "exeErrorCode": 0,
[2025-11-26 16:46:19]     "exeErrorDiag": "",
[2025-11-26 16:46:19]     "pilotErrorCode": 0,
[2025-11-26 16:46:19]     "pilotErrorDiag": "",
[2025-11-26 16:46:19]  *** Listing of results directory ***
[2025-11-26 16:46:19] total 1305936
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc    576529 Nov 22 20:25 pilot3.tar.gz
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc      5112 Nov 22 20:36 queuedata.json
[2025-11-26 16:46:19] -rwx------ 1 boinc boinc     36292 Nov 22 20:37 runpilot2-wrapper.sh
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc       100 Nov 26 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:46:19] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 10:41 run_atlas
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc       105 Nov 26 10:41 job.xml
[2025-11-26 16:46:19] -rw-r--r-- 2 boinc boinc 409282482 Nov 26 10:41 EVNT.47483658._000474.pool.root.1
[2025-11-26 16:46:19] -rw-r--r-- 2 boinc boinc    590100 Nov 26 10:41 input.tar.gz
[2025-11-26 16:46:19] -rw-r--r-- 2 boinc boinc     15847 Nov 26 10:41 start_atlas.sh
[2025-11-26 16:46:19] drwxrwx--x 2 boinc boinc      4096 Nov 26 10:41 shared
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc         0 Nov 26 10:41 boinc_setup_complete
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc      6444 Nov 26 10:41 init_data.xml
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc         0 Nov 26 10:41 boinc_lockfile
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc      2784 Nov 26 10:41 pandaJob.out
[2025-11-26 16:46:19] -rw------- 1 boinc boinc    991827 Nov 26 10:41 agis_schedconf.cvmfs.json
[2025-11-26 16:46:19] drwx------ 5 boinc boinc      4096 Nov 26 10:41 pilot3
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc       531 Nov 26 16:36 boinc_task_state.xml
[2025-11-26 16:46:19] -rw------- 1 boinc boinc 915481884 Nov 26 16:45 HITS.47556137._004692.pool.root.1
[2025-11-26 16:46:19] -rw------- 1 boinc boinc      1024 Nov 26 16:45 memory_monitor_summary.json
[2025-11-26 16:46:19] -rw------- 1 boinc boinc   1516240 Nov 26 16:45 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:46:19] -rw------- 1 boinc boinc   1215644 Nov 26 16:45 log.47556137._004692.job.log.tgz.1
[2025-11-26 16:46:19] -rw------- 1 boinc boinc      8563 Nov 26 16:45 heartbeat.json
[2025-11-26 16:46:19] -rw------- 1 boinc boinc        95 Nov 26 16:46 pilot_heartbeat.json
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc      8192 Nov 26 16:46 boinc_mmap_file
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc        28 Nov 26 16:46 wrapper_checkpoint.txt
[2025-11-26 16:46:19] -rw------- 1 boinc boinc      4824 Nov 26 16:46 pilotlog.txt
[2025-11-26 16:46:19] -rw------- 1 boinc boinc   3089542 Nov 26 16:46 log.47556137._004692.job.log.1
[2025-11-26 16:46:19] -rw------- 1 boinc boinc       353 Nov 26 16:46 output.list
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc       620 Nov 26 16:46 runtime_log
[2025-11-26 16:46:19] -rw------- 1 boinc boinc   4321280 Nov 26 16:46 result.tar.gz
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc      8903 Nov 26 16:46 runtime_log.err
[2025-11-26 16:46:19] -rw------- 1 boinc boinc       666 Nov 26 16:46 rfdKDmSb8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOFIKDm6zuTkm.diag
[2025-11-26 16:46:19] -rw-r--r-- 1 boinc boinc      9323 Nov 26 16:46 stderr.txt
[2025-11-26 16:46:19] HITS file was successfully produced:
[2025-11-26 16:46:19] -rw------- 1 boinc boinc 915481884 Nov 26 16:45 shared/HITS.pool.root.1
[2025-11-26 16:46:19]  *** Contents of shared directory: ***
[2025-11-26 16:46:19] total 1298544
[2025-11-26 16:46:19] -rw-r--r-- 2 boinc boinc 409282482 Nov 26 10:41 ATLAS.root_0
[2025-11-26 16:46:19] -rw-r--r-- 2 boinc boinc    590100 Nov 26 10:41 input.tar.gz
[2025-11-26 16:46:19] -rw-r--r-- 2 boinc boinc     15847 Nov 26 10:41 start_atlas.sh
[2025-11-26 16:46:19] -rw------- 1 boinc boinc 915481884 Nov 26 16:45 HITS.pool.root.1
[2025-11-26 16:46:19] -rw------- 1 boinc boinc   4321280 Nov 26 16:46 result.tar.gz
16:46:20 (2891563): run_atlas exited; CPU time 84125.122015
16:46:20 (2891563): called boinc_finish(0)

</stderr_txt>
]]>

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