Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
04:03:21 (551069): wrapper (7.7.26015): starting
04:03:21 (551069): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 04:03:21] Arguments: --nthreads 4
[2025-11-26 04:03:21] Threads: 4
[2025-11-26 04:03:21] Checking for CVMFS
[2025-11-26 04:03:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:03:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:03:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:03:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:03:21] 2.11.3.0 33379 3970 76872 153316 2 81 3953243 4194304 0 130560 0 1217258 99.579 437298 481 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2025-11-26 04:03:21] CVMFS is ok
[2025-11-26 04:03:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:03:21] Checking for apptainer binary...
[2025-11-26 04:03:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:03:21] Running /usr/bin/apptainer --version
[2025-11-26 04:03:22] apptainer version 1.4.4-1.fc42
[2025-11-26 04:03:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:03:22] R7OwensSE
[2025-11-26 04:03:22] apptainer works
[2025-11-26 04:03:22] Set ATHENA_PROC_NUMBER=4
[2025-11-26 04:03:22] Set ATHENA_CORE_NUMBER=4
[2025-11-26 04:03:22] Starting ATLAS job with PandaID=6893877096
[2025-11-26 04:03:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:20:56]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:20:56] 2025-11-26 23:20:16,912 | INFO     | monitor loop #3595: job 0:6893877096 is in state 'finished'
[2025-11-26 17:20:56] 2025-11-26 23:20:16,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:20:56] 2025-11-26 23:20:17,392 | INFO     | time since job start (47804s) is within the limit (172800.0s)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,324 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 17:20:56] 2025-11-26 23:20:18,327 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3457.6397500000003
[2025-11-26 17:20:56] 2025-11-26 23:20:18,330 | INFO     | using path: /data/boinc/slots/7/PanDA_Pilot-6893877096/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,330 | INFO     | extracted standard info from prmon json
[2025-11-26 17:20:56] 2025-11-26 23:20:18,330 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:20:56] 2025-11-26 23:20:18,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:20:56] 2025-11-26 23:20:18,340 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:20:56] 2025-11-26 23:20:18,341 | INFO     | sum of square deviations: 149425908660.0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,352 | INFO     | sum of deviations: 491185834494.99994
[2025-11-26 17:20:56] 2025-11-26 23:20:18,352 | INFO     | mean x: 1764175319.5
[2025-11-26 17:20:56] 2025-11-26 23:20:18,352 | INFO     | mean y: 2297926.1964285714
[2025-11-26 17:20:56] 2025-11-26 23:20:18,352 | INFO     | intersect: -5796816392.564648
[2025-11-26 17:20:56] 2025-11-26 23:20:18,353 | INFO     | chi2: 4.188930998825948
[2025-11-26 17:20:56] 2025-11-26 23:20:18,354 | INFO     | sum of square deviations: 146585185630.0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,365 | INFO     | sum of deviations: 668764531719.0001
[2025-11-26 17:20:56] 2025-11-26 23:20:18,365 | INFO     | mean x: 1764175167.0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,365 | INFO     | mean y: 2307450.9037227216
[2025-11-26 17:20:56] 2025-11-26 23:20:18,365 | INFO     | intersect: -8046376148.04506
[2025-11-26 17:20:56] 2025-11-26 23:20:18,366 | INFO     | chi2: 1.7245206575891305
[2025-11-26 17:20:56] 2025-11-26 23:20:18,366 | INFO     | current chi2=1.7245206575891305 (change=58.83148569235277 %)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,366 | INFO     | sum of square deviations: 143780695837.5
[2025-11-26 17:20:56] 2025-11-26 23:20:18,377 | INFO     | sum of deviations: 666366821799.0005
[2025-11-26 17:20:56] 2025-11-26 23:20:18,377 | INFO     | mean x: 1764175014.5
[2025-11-26 17:20:56] 2025-11-26 23:20:18,377 | INFO     | mean y: 2307319.4289405686
[2025-11-26 17:20:56] 2025-11-26 23:20:18,377 | INFO     | intersect: -8173948127.534621
[2025-11-26 17:20:56] 2025-11-26 23:20:18,378 | INFO     | chi2: 1.7153726222756438
[2025-11-26 17:20:56] 2025-11-26 23:20:18,378 | INFO     | current chi2=1.7153726222756438 (change=0.5304682940867542 %)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,378 | INFO     | right removable region: 773
[2025-11-26 17:20:56] 2025-11-26 23:20:18,379 | INFO     | sum of square deviations: 146585185630.0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,390 | INFO     | sum of deviations: 369019762361.00006
[2025-11-26 17:20:56] 2025-11-26 23:20:18,390 | INFO     | mean x: 1764175472.0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,390 | INFO     | mean y: 2304465.997432606
[2025-11-26 17:20:56] 2025-11-26 23:20:18,391 | INFO     | intersect: -4438905678.415066
[2025-11-26 17:20:56] 2025-11-26 23:20:18,391 | INFO     | chi2: 2.6069292526857613
[2025-11-26 17:20:56] 2025-11-26 23:20:18,391 | INFO     | current chi2=2.6069292526857613 (change=37.76624027904929 %)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,392 | INFO     | sum of square deviations: 143780695837.5
[2025-11-26 17:20:56] 2025-11-26 23:20:18,403 | INFO     | sum of deviations: 349421405146.49994
[2025-11-26 17:20:56] 2025-11-26 23:20:18,403 | INFO     | mean x: 1764175624.5
[2025-11-26 17:20:56] 2025-11-26 23:20:18,403 | INFO     | mean y: 2305532.5413436694
[2025-11-26 17:20:56] 2025-11-26 23:20:18,403 | INFO     | intersect: -4285062267.755654
[2025-11-26 17:20:56] 2025-11-26 23:20:18,404 | INFO     | chi2: 2.596042957492822
[2025-11-26 17:20:56] 2025-11-26 23:20:18,404 | INFO     | current chi2=2.596042957492822 (change=0.41759074135685365 %)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,404 | INFO     | left removable region: 20
[2025-11-26 17:20:56] 2025-11-26 23:20:18,405 | INFO     | sum of square deviations: 132392257192.0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,415 | INFO     | sum of deviations: 477679172222.00006
[2025-11-26 17:20:56] 2025-11-26 23:20:18,415 | INFO     | mean x: 1764175594.0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,415 | INFO     | mean y: 2317673.0650730412
[2025-11-26 17:20:56] 2025-11-26 23:20:18,415 | INFO     | intersect: -6362933250.741197
[2025-11-26 17:20:56] 2025-11-26 23:20:18,416 | INFO     | chi2: 0.08383967204834594
[2025-11-26 17:20:56] 2025-11-26 23:20:18,416 | INFO     | current memory leak: 3.61 B/s (using 753 data points, chi2=0.08)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | could have reported an average CPU frequency of 3456 MHz (30 samples)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | ..............................
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | . Timing measurements:
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | . get job = 0 s
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | . initial setup = 2 s
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | . payload setup = 5 s
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | . stage-in = 0 s
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | . payload execution = 47770 s
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | . stage-out = 3 s
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | . log creation = 0 s
[2025-11-26 17:20:56] 2025-11-26 23:20:18,417 | INFO     | ..............................
[2025-11-26 17:20:56] 2025-11-26 23:20:18,492 | INFO     | 
[2025-11-26 17:20:56] 2025-11-26 23:20:18,492 | INFO     | job summary report
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | --------------------------------------------------
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | PanDA job id: 6893877096
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | task id: 47523449
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | errors: (none)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | pilot state: finished 
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | transexitcode: 0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | exeerrorcode: 0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | exeerrordiag: 
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | exitcode: 0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | exitmsg: OK
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | cpuconsumptiontime: 188731 s
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | nevents: 1000
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | neventsw: 0
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | pid: 561409
[2025-11-26 17:20:56] 2025-11-26 23:20:18,493 | INFO     | pgrp: 561409
[2025-11-26 17:20:56] 2025-11-26 23:20:18,494 | INFO     | corecount: 4
[2025-11-26 17:20:56] 2025-11-26 23:20:18,494 | INFO     | event service: False
[2025-11-26 17:20:56] 2025-11-26 23:20:18,494 | INFO     | sizes: {0: 2284039, 1: 2284238, 5: 2284500, 11: 2284556, 47779: 2332317, 47783: 2341305, 47786: 2341489, 47791: 2341735}
[2025-11-26 17:20:56] 2025-11-26 23:20:18,494 | INFO     | --------------------------------------------------
[2025-11-26 17:20:56] 2025-11-26 23:20:18,494 | INFO     | 
[2025-11-26 17:20:56] 2025-11-26 23:20:18,494 | INFO     | executing command: ls -lF /data/boinc/slots/7
[2025-11-26 17:20:56] 2025-11-26 23:20:18,518 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,518 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,518 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,518 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | job 6893877096 has completed (purged errors)
[2025-11-26 17:20:56] 2025-11-26 23:20:18,519 | INFO     | overall cleanup function is called
[2025-11-26 17:20:56] 2025-11-26 23:20:19,531 | INFO     | --- collectZombieJob: --- 10, [561409]
[2025-11-26 17:20:56] 2025-11-26 23:20:19,531 | INFO     | zombie collector waiting for pid 561409
[2025-11-26 17:20:56] 2025-11-26 23:20:19,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:20:56] 2025-11-26 23:20:19,531 | INFO     | collected zombie processes
[2025-11-26 17:20:56] 2025-11-26 23:20:19,531 | INFO     | will attempt to kill all subprocesses of pid=561409
[2025-11-26 17:20:56] 2025-11-26 23:20:19,620 | INFO     | process IDs to be killed: [561409] (in reverse order)
[2025-11-26 17:20:56] 2025-11-26 23:20:19,677 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:20:56] 2025-11-26 23:20:19,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:20:56] 2025-11-26 23:20:19,680 | INFO     | did not find any defunct processes belonging to 561409
[2025-11-26 17:20:56] 2025-11-26 23:20:19,682 | INFO     | did not find any defunct processes belonging to 561409
[2025-11-26 17:20:56] 2025-11-26 23:20:19,683 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:20:56] 2025-11-26 23:20:19,683 | INFO     | ready for new job
[2025-11-26 17:20:56] 2025-11-26 23:20:19,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:20:56] 2025-11-26 23:20:19,686 | INFO     | ***************************************
[2025-11-26 17:20:56] 2025-11-26 23:20:19,687 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:20:56] 2025-11-26 23:20:19,687 | INFO     | ***************************************
[2025-11-26 17:20:56] 2025-11-26 23:20:19,687 | INFO     | 
[2025-11-26 17:20:56] 2025-11-26 23:20:19,688 | INFO     | architecture information:
[2025-11-26 17:20:56] 2025-11-26 23:20:19,688 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:20:56] 2025-11-26 23:20:19,708 | INFO     | cat /etc/os-release:
[2025-11-26 17:20:56] NAME="CentOS Linux"
[2025-11-26 17:20:56] VERSION="7 (Core)"
[2025-11-26 17:20:56] ID="centos"
[2025-11-26 17:20:56] ID_LIKE="rhel fedora"
[2025-11-26 17:20:56] VERSION_ID="7"
[2025-11-26 17:20:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:20:56] ANSI_COLOR="0;31"
[2025-11-26 17:20:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:20:56] HOME_URL="https://www.centos.org/"
[2025-11-26 17:20:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:20:56] 
[2025-11-26 17:20:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:20:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:20:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:20:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:20:56] 
[2025-11-26 17:20:56] 2025-11-26 23:20:19,708 | INFO     | ***************************************
[2025-11-26 17:20:56] 2025-11-26 23:20:20,211 | INFO     | executing command: df -mP /data/boinc/slots/7
[2025-11-26 17:20:56] 2025-11-26 23:20:20,242 | INFO     | sufficient remaining disk space (402720292864 B)
[2025-11-26 17:20:56] 2025-11-26 23:20:20,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:20:56] 2025-11-26 23:20:20,242 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:20:56] 2025-11-26 23:20:20,242 | INFO     | update_server=False
[2025-11-26 17:20:56] 2025-11-26 23:20:20,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:20:56] 2025-11-26 23:20:20,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:20:56] 2025-11-26 23:20:20,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:20:56] 2025-11-26 23:20:20,420 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:20:56] 2025-11-26 23:20:20,420 | INFO     | aborting loop
[2025-11-26 17:20:56] 2025-11-26 23:20:20,648 | INFO     | all data control threads have been joined
[2025-11-26 17:20:56] 2025-11-26 23:20:21,247 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:21,248 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:21,273 | INFO     | all payload control threads have been joined
[2025-11-26 17:20:56] 2025-11-26 23:20:21,421 | INFO     | all job control threads have been joined
[2025-11-26 17:20:56] 2025-11-26 23:20:21,425 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:21,443 | INFO     | [job] validate thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:21,491 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:21,506 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:21,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:20:56] 2025-11-26 23:20:21,641 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:21,653 | INFO     | [data] control thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:22,156 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:22,278 | INFO     | [payload] control thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:22,426 | INFO     | [job] control thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:22,702 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:22,758 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:23,634 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:24,248 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:30,885 | INFO     | job.realtimelogging is not enabled
[2025-11-26 17:20:56] 2025-11-26 23:20:31,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:20:56] 2025-11-26 23:20:50,124 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:20:56] 2025-11-26 23:20:50,576 | INFO     | PID=554858 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 17:20:56] 2025-11-26 23:20:50,577 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:20:56] 2025-11-26 23:20:50,577 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:20:56] 2025-11-26 23:20:50,577 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:20:56] 2025-11-26 23:20:51,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903220029248)>', '<ExcThread(monitor, started 139902939268864)>']
[2025-11-26 17:20:56] 2025-11-26 23:20:51,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:20:56] 2025-11-26 23:20:51,581 | INFO     | [monitor] control thread has ended
[2025-11-26 17:20:56] 2025-11-26 23:20:56,392 | INFO     | all workflow threads have been joined
[2025-11-26 17:20:56] 2025-11-26 23:20:56,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:20:56] 2025-11-26 23:20:56,392 | INFO     | traces error code: 0
[2025-11-26 17:20:56] 2025-11-26 23:20:56,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:20:56] 2025-11-26 23:20:56,495 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:20:56] 2025-11-26 23:20:56,497 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:20:56] 2025-11-26 23:20:56,500 [wrapper] pilotpid: 554858
[2025-11-26 17:20:56] 2025-11-26 23:20:56,506 [wrapper] Pilot exit status: 0
[2025-11-26 17:20:56] 2025-11-26 23:20:56,517 [wrapper] pandaids: 6893877096
[2025-11-26 17:20:56] 2025-11-26 23:20:56,564 [wrapper] cleanup supervisor_pilot  652821 554859
[2025-11-26 17:20:56] 2025-11-26 23:20:56,570 [wrapper] Test setup, not cleaning
[2025-11-26 17:20:56] 2025-11-26 23:20:56,572 [wrapper] apfmon messages muted
[2025-11-26 17:20:56] 2025-11-26 23:20:56,574 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:20:56] 2025-11-26 23:20:56,576 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:20:56]  *** Error codes and diagnostics ***
[2025-11-26 17:20:56]     "exeErrorCode": 0,
[2025-11-26 17:20:56]     "exeErrorDiag": "",
[2025-11-26 17:20:56]     "pilotErrorCode": 0,
[2025-11-26 17:20:56]     "pilotErrorDiag": "",
[2025-11-26 17:20:56]  *** Listing of results directory ***
[2025-11-26 17:20:56] total 1320952
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc    576529 Nov 20 12:04 pilot3.tar.gz
[2025-11-26 17:20:56] -rwx------ 1 boinc boinc     36292 Nov 20 12:06 runpilot2-wrapper.sh
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc      5112 Nov 20 12:06 queuedata.json
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc       100 Nov 26 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:20:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 04:03 run_atlas
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc       105 Nov 26 04:03 job.xml
[2025-11-26 17:20:56] -rw-r--r-- 2 boinc boinc 408450817 Nov 26 04:03 EVNT.47493127._000787.pool.root.1
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc      9535 Nov 26 04:03 init_data.xml
[2025-11-26 17:20:56] drwxrwx--x 2 boinc boinc      4096 Nov 26 04:03 shared
[2025-11-26 17:20:56] -rw-r--r-- 2 boinc boinc    590100 Nov 26 04:03 input.tar.gz
[2025-11-26 17:20:56] -rw-r--r-- 2 boinc boinc     15847 Nov 26 04:03 start_atlas.sh
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc         0 Nov 26 04:03 boinc_lockfile
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc      2784 Nov 26 04:03 pandaJob.out
[2025-11-26 17:20:56] -rw------- 1 boinc boinc    991827 Nov 26 04:03 agis_schedconf.cvmfs.json
[2025-11-26 17:20:56] drwx------ 5 boinc boinc      4096 Nov 26 04:03 pilot3
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc       533 Nov 26 17:14 boinc_task_state.xml
[2025-11-26 17:20:56] -rw------- 1 boinc boinc 923916822 Nov 26 17:19 HITS.47523449._007863.pool.root.1
[2025-11-26 17:20:56] -rw------- 1 boinc boinc      1030 Nov 26 17:20 memory_monitor_summary.json
[2025-11-26 17:20:56] -rw------- 1 boinc boinc   1516240 Nov 26 17:20 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:20:56] -rw------- 1 boinc boinc   1555583 Nov 26 17:20 log.47523449._007863.job.log.tgz.1
[2025-11-26 17:20:56] -rw------- 1 boinc boinc        95 Nov 26 17:20 pilot_heartbeat.json
[2025-11-26 17:20:56] -rw------- 1 boinc boinc      8572 Nov 26 17:20 heartbeat.json
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc      8192 Nov 26 17:20 boinc_mmap_file
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc        29 Nov 26 17:20 wrapper_checkpoint.txt
[2025-11-26 17:20:56] -rw------- 1 boinc boinc      4817 Nov 26 17:20 pilotlog.txt
[2025-11-26 17:20:56] -rw------- 1 boinc boinc   6626865 Nov 26 17:20 log.47523449._007863.job.log.1
[2025-11-26 17:20:56] -rw------- 1 boinc boinc       353 Nov 26 17:20 output.list
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc       620 Nov 26 17:20 runtime_log
[2025-11-26 17:20:56] -rw------- 1 boinc boinc   8202240 Nov 26 17:20 result.tar.gz
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc      8731 Nov 26 17:20 runtime_log.err
[2025-11-26 17:20:56] -rw------- 1 boinc boinc       652 Nov 26 17:20 JugKDmdEOg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1NIKDmAFIi8m.diag
[2025-11-26 17:20:56] -rw-r--r-- 1 boinc boinc     20931 Nov 26 17:20 stderr.txt
[2025-11-26 17:20:56] HITS file was successfully produced:
[2025-11-26 17:20:56] -rw------- 1 boinc boinc 923916822 Nov 26 17:19 shared/HITS.pool.root.1
[2025-11-26 17:20:56]  *** Contents of shared directory: ***
[2025-11-26 17:20:56] total 1309760
[2025-11-26 17:20:56] -rw-r--r-- 2 boinc boinc 408450817 Nov 26 04:03 ATLAS.root_0
[2025-11-26 17:20:56] -rw-r--r-- 2 boinc boinc    590100 Nov 26 04:03 input.tar.gz
[2025-11-26 17:20:56] -rw-r--r-- 2 boinc boinc     15847 Nov 26 04:03 start_atlas.sh
[2025-11-26 17:20:56] -rw------- 1 boinc boinc 923916822 Nov 26 17:19 HITS.pool.root.1
[2025-11-26 17:20:56] -rw------- 1 boinc boinc   8202240 Nov 26 17:20 result.tar.gz
17:20:57 (551069): run_atlas exited; CPU time 188715.851695
17:20:57 (551069): called boinc_finish(0)

</stderr_txt>
]]>

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