Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:28:12 (4044): wrapper (7.7.26015): starting
11:28:12 (4044): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 11:28:12] Arguments: --nthreads 8
[2025-11-23 11:28:12] Threads: 8
[2025-11-23 11:28:12] Checking for CVMFS
[2025-11-23 11:28:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 11:28:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 11:28:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 11:28:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 11:28:12] 2.11.2.0 5524 113604 138068 153215 1 81 15019449 18432001 1885 130560 0 82430132 99.974 4839742 32642 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 11:28:12] CVMFS is ok
[2025-11-23 11:28:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 11:28:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 11:28:12] Further information can be found at the LHC@home message board.
[2025-11-23 11:28:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:28:12] Checking for apptainer binary...
[2025-11-23 11:28:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 11:28:12] Running /usr/bin/apptainer --version
[2025-11-23 11:28:12] apptainer version 1.3.2-1.el7
[2025-11-23 11:28:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:28:13] c-206-5.aglt2.org
[2025-11-23 11:28:13] apptainer works
[2025-11-23 11:28:13] Set ATHENA_PROC_NUMBER=8
[2025-11-23 11:28:13] Set ATHENA_CORE_NUMBER=8
[2025-11-23 11:28:13] Starting ATLAS job with PandaID=6895346886
[2025-11-23 11:28:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 06:40:25]  *** The last 200 lines of the pilot log: ***
[2025-11-24 06:40:25] 2025-11-24 11:39:34,036 | INFO     | monitor loop #4930: job 0:6895346886 is in state 'finished'
[2025-11-24 06:40:25] 2025-11-24 11:39:34,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 06:40:25] 2025-11-24 11:39:34,548 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 06:40:25] 2025-11-24 11:39:34,552 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2455.7083333333335
[2025-11-24 06:40:25] 2025-11-24 11:39:34,554 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895346886/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 06:40:25] 2025-11-24 11:39:34,555 | INFO     | extracted standard info from prmon json
[2025-11-24 06:40:25] 2025-11-24 11:39:34,555 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 06:40:25] 2025-11-24 11:39:34,555 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 06:40:25] 2025-11-24 11:39:34,571 | INFO     | fitting pss+swap vs Time
[2025-11-24 06:40:25] 2025-11-24 11:39:34,573 | INFO     | sum of square deviations: 449797661607.69916
[2025-11-24 06:40:25] 2025-11-24 11:39:34,599 | INFO     | sum of deviations: 1959265499206.4187
[2025-11-24 06:40:25] 2025-11-24 11:39:34,599 | INFO     | mean x: 1763949828.1042402
[2025-11-24 06:40:25] 2025-11-24 11:39:34,599 | INFO     | mean y: 2866986.454063604
[2025-11-24 06:40:25] 2025-11-24 11:39:34,599 | INFO     | intersect: -7680690167.18449
[2025-11-24 06:40:25] 2025-11-24 11:39:34,600 | INFO     | chi2: 5.746813104863977
[2025-11-24 06:40:25] 2025-11-24 11:39:34,602 | INFO     | sum of square deviations: 443863935710.8655
[2025-11-24 06:40:25] 2025-11-24 11:39:34,633 | INFO     | sum of deviations: 2294644031901.56
[2025-11-24 06:40:25] 2025-11-24 11:39:34,633 | INFO     | mean x: 1763949675.606921
[2025-11-24 06:40:25] 2025-11-24 11:39:34,633 | INFO     | mean y: 2875603.8003549245
[2025-11-24 06:40:25] 2025-11-24 11:39:34,634 | INFO     | intersect: -9116217591.333118
[2025-11-24 06:40:25] 2025-11-24 11:39:34,635 | INFO     | chi2: 3.176674378804075
[2025-11-24 06:40:25] 2025-11-24 11:39:34,635 | INFO     | current chi2=3.176674378804075 (change=44.722852112322784 %)
[2025-11-24 06:40:25] 2025-11-24 11:39:34,637 | INFO     | sum of square deviations: 437982629401.51605
[2025-11-24 06:40:25] 2025-11-24 11:39:34,675 | INFO     | sum of deviations: 2446498097655.2134
[2025-11-24 06:40:25] 2025-11-24 11:39:34,680 | INFO     | mean x: 1763949523.1096256
[2025-11-24 06:40:25] 2025-11-24 11:39:34,681 | INFO     | mean y: 2879540.396613191
[2025-11-24 06:40:25] 2025-11-24 11:39:34,681 | INFO     | intersect: -9850249015.282543
[2025-11-24 06:40:25] 2025-11-24 11:39:34,683 | INFO     | chi2: 2.5609608623703304
[2025-11-24 06:40:25] 2025-11-24 11:39:34,683 | INFO     | current chi2=2.5609608623703304 (change=19.382330167108368 %)
[2025-11-24 06:40:25] 2025-11-24 11:39:34,683 | INFO     | right removable region: 1121
[2025-11-24 06:40:25] 2025-11-24 11:39:34,685 | INFO     | sum of square deviations: 443863587279.07855
[2025-11-24 06:40:25] 2025-11-24 11:39:34,729 | INFO     | sum of deviations: 1664889710423.9727
[2025-11-24 06:40:25] 2025-11-24 11:39:34,729 | INFO     | mean x: 1763949980.6060338
[2025-11-24 06:40:25] 2025-11-24 11:39:34,729 | INFO     | mean y: 2874543.0629991125
[2025-11-24 06:40:25] 2025-11-24 11:39:34,730 | INFO     | intersect: -6613532516.629091
[2025-11-24 06:40:25] 2025-11-24 11:39:34,731 | INFO     | chi2: 3.6978287873551148
[2025-11-24 06:40:25] 2025-11-24 11:39:34,731 | INFO     | current chi2=3.6978287873551148 (change=35.65427098672561 %)
[2025-11-24 06:40:25] 2025-11-24 11:39:34,733 | INFO     | sum of square deviations: 437982001773.1657
[2025-11-24 06:40:25] 2025-11-24 11:39:34,776 | INFO     | sum of deviations: 1591884861395.3389
[2025-11-24 06:40:25] 2025-11-24 11:39:34,776 | INFO     | mean x: 1763950133.106952
[2025-11-24 06:40:25] 2025-11-24 11:39:34,776 | INFO     | mean y: 2876435.5721925134
[2025-11-24 06:40:25] 2025-11-24 11:39:34,776 | INFO     | intersect: -6408358505.089908
[2025-11-24 06:40:25] 2025-11-24 11:39:34,778 | INFO     | chi2: 3.644770810515464
[2025-11-24 06:40:25] 2025-11-24 11:39:34,778 | INFO     | current chi2=3.644770810515464 (change=1.4348413593697171 %)
[2025-11-24 06:40:25] 2025-11-24 11:39:34,778 | INFO     | left removable region: 20
[2025-11-24 06:40:25] 2025-11-24 11:39:34,780 | INFO     | sum of square deviations: 413847057776.485
[2025-11-24 06:40:25] 2025-11-24 11:39:34,800 | INFO     | time since job start (69069s) is within the limit (172800.0s)
[2025-11-24 06:40:25] 2025-11-24 11:39:34,822 | INFO     | sum of deviations: 2001297357907.315
[2025-11-24 06:40:25] 2025-11-24 11:39:34,822 | INFO     | mean x: 1763950102.6158037
[2025-11-24 06:40:25] 2025-11-24 11:39:34,822 | INFO     | mean y: 2892667.326975477
[2025-11-24 06:40:25] 2025-11-24 11:39:34,823 | INFO     | intersect: -8527284395.698003
[2025-11-24 06:40:25] 2025-11-24 11:39:34,824 | INFO     | chi2: 0.323986988689079
[2025-11-24 06:40:25] 2025-11-24 11:39:34,824 | INFO     | current memory leak: 4.84 B/s (using 1101 data points, chi2=0.32)
[2025-11-24 06:40:25] 2025-11-24 11:39:34,826 | INFO     | could have reported an average CPU frequency of 2624 MHz (41 samples)
[2025-11-24 06:40:25] 2025-11-24 11:39:34,826 | INFO     | ..............................
[2025-11-24 06:40:25] 2025-11-24 11:39:34,826 | INFO     | . Timing measurements:
[2025-11-24 06:40:25] 2025-11-24 11:39:34,826 | INFO     | . get job = 0 s
[2025-11-24 06:40:25] 2025-11-24 11:39:34,826 | INFO     | . initial setup = 2 s
[2025-11-24 06:40:25] 2025-11-24 11:39:34,826 | INFO     | . payload setup = 5 s
[2025-11-24 06:40:25] 2025-11-24 11:39:34,827 | INFO     | . stage-in = 0 s
[2025-11-24 06:40:25] 2025-11-24 11:39:34,827 | INFO     | . payload execution = 69033 s
[2025-11-24 06:40:25] 2025-11-24 11:39:34,827 | INFO     | . stage-out = 3 s
[2025-11-24 06:40:25] 2025-11-24 11:39:34,827 | INFO     | . log creation = 0 s
[2025-11-24 06:40:25] 2025-11-24 11:39:34,827 | INFO     | ..............................
[2025-11-24 06:40:25] 2025-11-24 11:39:35,201 | INFO     | 
[2025-11-24 06:40:25] 2025-11-24 11:39:35,201 | INFO     | job summary report
[2025-11-24 06:40:25] 2025-11-24 11:39:35,202 | INFO     | --------------------------------------------------
[2025-11-24 06:40:25] 2025-11-24 11:39:35,202 | INFO     | PanDA job id: 6895346886
[2025-11-24 06:40:25] 2025-11-24 11:39:35,202 | INFO     | task id: 47556137
[2025-11-24 06:40:25] 2025-11-24 11:39:35,202 | INFO     | errors: (none)
[2025-11-24 06:40:25] 2025-11-24 11:39:35,202 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 06:40:25] 2025-11-24 11:39:35,203 | INFO     | pilot state: finished 
[2025-11-24 06:40:25] 2025-11-24 11:39:35,203 | INFO     | transexitcode: 0
[2025-11-24 06:40:25] 2025-11-24 11:39:35,203 | INFO     | exeerrorcode: 0
[2025-11-24 06:40:25] 2025-11-24 11:39:35,203 | INFO     | exeerrordiag: 
[2025-11-24 06:40:25] 2025-11-24 11:39:35,203 | INFO     | exitcode: 0
[2025-11-24 06:40:25] 2025-11-24 11:39:35,203 | INFO     | exitmsg: OK
[2025-11-24 06:40:25] 2025-11-24 11:39:35,204 | INFO     | cpuconsumptiontime: 535567 s
[2025-11-24 06:40:25] 2025-11-24 11:39:35,204 | INFO     | nevents: 1000
[2025-11-24 06:40:25] 2025-11-24 11:39:35,204 | INFO     | neventsw: 0
[2025-11-24 06:40:25] 2025-11-24 11:39:35,204 | INFO     | pid: 14213
[2025-11-24 06:40:25] 2025-11-24 11:39:35,204 | INFO     | pgrp: 14213
[2025-11-24 06:40:25] 2025-11-24 11:39:35,204 | INFO     | corecount: 8
[2025-11-24 06:40:25] 2025-11-24 11:39:35,205 | INFO     | event service: False
[2025-11-24 06:40:25] 2025-11-24 11:39:35,205 | INFO     | sizes: {0: 2297927, 1: 2298783, 2: 2298783, 5: 2299073, 12: 2299129, 69042: 2355318, 69048: 2365103, 69049: 2365159, 69054: 2365501}
[2025-11-24 06:40:25] 2025-11-24 11:39:35,205 | INFO     | --------------------------------------------------
[2025-11-24 06:40:25] 2025-11-24 11:39:35,205 | INFO     | 
[2025-11-24 06:40:25] 2025-11-24 11:39:35,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 06:40:25] 2025-11-24 11:39:35,224 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,225 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,225 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,225 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,226 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,226 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,226 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,226 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,226 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,226 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,226 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,226 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 06:40:25] 2025-11-24 11:39:35,226 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,227 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 06:40:25] 2025-11-24 11:39:35,227 | INFO     | job 6895346886 has completed (purged errors)
[2025-11-24 06:40:25] 2025-11-24 11:39:35,227 | INFO     | overall cleanup function is called
[2025-11-24 06:40:25] 2025-11-24 11:39:36,240 | INFO     | --- collectZombieJob: --- 10, [14213]
[2025-11-24 06:40:25] 2025-11-24 11:39:36,240 | INFO     | zombie collector waiting for pid 14213
[2025-11-24 06:40:25] 2025-11-24 11:39:36,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 06:40:25] 2025-11-24 11:39:36,240 | INFO     | collected zombie processes
[2025-11-24 06:40:25] 2025-11-24 11:39:36,240 | INFO     | will attempt to kill all subprocesses of pid=14213
[2025-11-24 06:40:25] 2025-11-24 11:39:36,410 | INFO     | process IDs to be killed: [14213] (in reverse order)
[2025-11-24 06:40:25] 2025-11-24 11:39:36,455 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 06:40:25] 2025-11-24 11:39:36,455 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 06:40:25] 2025-11-24 11:39:36,458 | INFO     | did not find any defunct processes belonging to 14213
[2025-11-24 06:40:25] 2025-11-24 11:39:36,460 | INFO     | did not find any defunct processes belonging to 14213
[2025-11-24 06:40:25] 2025-11-24 11:39:36,461 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 06:40:25] 2025-11-24 11:39:36,462 | INFO     | ready for new job
[2025-11-24 06:40:25] 2025-11-24 11:39:36,462 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 06:40:25] 2025-11-24 11:39:36,465 | INFO     | ***************************************
[2025-11-24 06:40:25] 2025-11-24 11:39:36,465 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 06:40:25] 2025-11-24 11:39:36,465 | INFO     | ***************************************
[2025-11-24 06:40:25] 2025-11-24 11:39:36,466 | INFO     | 
[2025-11-24 06:40:25] 2025-11-24 11:39:36,466 | INFO     | architecture information:
[2025-11-24 06:40:25] 2025-11-24 11:39:36,467 | INFO     | executing command: cat /etc/os-release
[2025-11-24 06:40:25] 2025-11-24 11:39:36,484 | INFO     | cat /etc/os-release:
[2025-11-24 06:40:25] NAME="CentOS Linux"
[2025-11-24 06:40:25] VERSION="7 (Core)"
[2025-11-24 06:40:25] ID="centos"
[2025-11-24 06:40:25] ID_LIKE="rhel fedora"
[2025-11-24 06:40:25] VERSION_ID="7"
[2025-11-24 06:40:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 06:40:25] ANSI_COLOR="0;31"
[2025-11-24 06:40:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 06:40:25] HOME_URL="https://www.centos.org/"
[2025-11-24 06:40:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 06:40:25] 
[2025-11-24 06:40:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 06:40:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 06:40:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 06:40:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 06:40:25] 
[2025-11-24 06:40:25] 2025-11-24 11:39:36,485 | INFO     | ***************************************
[2025-11-24 06:40:25] 2025-11-24 11:39:36,988 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 06:40:25] 2025-11-24 11:39:37,007 | INFO     | sufficient remaining disk space (25503465472 B)
[2025-11-24 06:40:25] 2025-11-24 11:39:37,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 06:40:25] 2025-11-24 11:39:37,008 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 06:40:25] 2025-11-24 11:39:37,008 | INFO     | update_server=False
[2025-11-24 06:40:25] 2025-11-24 11:39:37,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 06:40:25] 2025-11-24 11:39:37,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 06:40:25] 2025-11-24 11:39:37,081 | INFO     | all data control threads have been joined
[2025-11-24 06:40:25] 2025-11-24 11:39:37,302 | INFO     | all payload control threads have been joined
[2025-11-24 06:40:25] 2025-11-24 11:39:37,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:40:25] 2025-11-24 11:39:37,544 | INFO     | aborting loop
[2025-11-24 06:40:25] 2025-11-24 11:39:37,576 | INFO     | all job control threads have been joined
[2025-11-24 06:40:25] 2025-11-24 11:39:38,015 | INFO     | [job] retrieve thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,086 | INFO     | [data] control thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,146 | INFO     | [data] copytool_in thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,224 | INFO     | [job] validate thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,295 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,308 | INFO     | [payload] control thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,343 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,495 | INFO     | [payload] failed_post thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,550 | INFO     | [job] job monitor thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,582 | INFO     | [job] control thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,670 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:38,864 | INFO     | [payload] validate_post thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:39,014 | INFO     | [data] copytool_out thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:39,253 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:39,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:40:25] 2025-11-24 11:39:40,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 06:40:25] 2025-11-24 11:39:41,009 | INFO     | [job] queue monitor thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:39:44,252 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 06:40:25] 2025-11-24 11:40:08,063 | INFO     | PID=7794 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 06:40:25] 2025-11-24 11:40:08,063 | INFO     | .. there are 3 such processes running
[2025-11-24 06:40:25] 2025-11-24 11:40:08,064 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 06:40:25] 2025-11-24 11:40:08,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 06:40:25] 2025-11-24 11:40:08,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 06:40:25] 2025-11-24 11:40:19,467 | INFO     | [monitor] cgroup control has ended
[2025-11-24 06:40:25] 2025-11-24 11:40:20,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374972680000)>', '<ExcThread(monitor, started 140374521652992)>']
[2025-11-24 06:40:25] 2025-11-24 11:40:21,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 06:40:25] 2025-11-24 11:40:21,131 | INFO     | [monitor] control thread has ended
[2025-11-24 06:40:25] 2025-11-24 11:40:25,212 | INFO     | all workflow threads have been joined
[2025-11-24 06:40:25] 2025-11-24 11:40:25,212 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 06:40:25] 2025-11-24 11:40:25,212 | INFO     | traces error code: 0
[2025-11-24 06:40:25] 2025-11-24 11:40:25,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 06:40:25] 2025-11-24 11:40:25,349 [wrapper] ==== pilot stdout END ====
[2025-11-24 06:40:25] 2025-11-24 11:40:25,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 06:40:25] 2025-11-24 11:40:25,354 [wrapper] pilotpid: 7794
[2025-11-24 06:40:25] 2025-11-24 11:40:25,356 [wrapper] Pilot exit status: 0
[2025-11-24 06:40:25] 2025-11-24 11:40:25,365 [wrapper] pandaids: 6895346886
[2025-11-24 06:40:25] 2025-11-24 11:40:25,401 [wrapper] cleanup supervisor_pilot 27691 7795
[2025-11-24 06:40:25] 2025-11-24 11:40:25,403 [wrapper] Test setup, not cleaning
[2025-11-24 06:40:25] 2025-11-24 11:40:25,405 [wrapper] apfmon messages muted
[2025-11-24 06:40:25] 2025-11-24 11:40:25,407 [wrapper] ==== wrapper stdout END ====
[2025-11-24 06:40:25] 2025-11-24 11:40:25,410 [wrapper] ==== wrapper stderr END ====
[2025-11-24 06:40:25]  *** Error codes and diagnostics ***
[2025-11-24 06:40:25]     "exeErrorCode": 0,
[2025-11-24 06:40:25]     "exeErrorDiag": "",
[2025-11-24 06:40:25]     "pilotErrorCode": 0,
[2025-11-24 06:40:25]     "pilotErrorDiag": "",
[2025-11-24 06:40:25]  *** Listing of results directory ***
[2025-11-24 06:40:25] total 1317620
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 14:13 pilot3.tar.gz
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 14:16 queuedata.json
[2025-11-24 06:40:25] -rwx------ 1 boincer umatlas     36292 Nov 22 14:17 runpilot2-wrapper.sh
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas       100 Nov 23 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 06:40:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 11:28 run_atlas
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas       105 Nov 23 11:28 job.xml
[2025-11-24 06:40:25] -rw-r--r-- 2 boincer umatlas 409729625 Nov 23 11:28 EVNT.47483658._000466.pool.root.1
[2025-11-24 06:40:25] drwxrwx--x 2 boincer umatlas      4096 Nov 23 11:28 shared
[2025-11-24 06:40:25] -rw-r--r-- 2 boincer umatlas    590103 Nov 23 11:28 input.tar.gz
[2025-11-24 06:40:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 11:28 start_atlas.sh
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas         0 Nov 23 11:28 boinc_lockfile
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 11:28 pandaJob.out
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas        57 Nov 23 11:28 setup.sh.local
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas    989785 Nov 23 11:28 agis_schedconf.cvmfs.json
[2025-11-24 06:40:25] drwx------ 5 boincer umatlas      4096 Nov 23 11:28 pilot3
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas       533 Nov 24 06:25 boinc_task_state.xml
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas 911918661 Nov 24 06:38 HITS.47556137._004613.pool.root.1
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas      1067 Nov 24 06:39 memory_monitor_summary.json
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas   1516227 Nov 24 06:39 agis_ddmendpoints.agis.ALL.json
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas   2297697 Nov 24 06:39 log.47556137._004613.job.log.tgz.1
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas      8672 Nov 24 06:39 heartbeat.json
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas      5952 Nov 24 06:39 init_data.xml
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas        95 Nov 24 06:40 pilot_heartbeat.json
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 06:40 boinc_mmap_file
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas        29 Nov 24 06:40 wrapper_checkpoint.txt
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas      4820 Nov 24 06:40 pilotlog.txt
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas   9544988 Nov 24 06:40 log.47556137._004613.job.log.1
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas       353 Nov 24 06:40 output.list
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas       620 Nov 24 06:40 runtime_log
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas  11857920 Nov 24 06:40 result.tar.gz
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas      9338 Nov 24 06:40 runtime_log.err
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas       667 Nov 24 06:40 o3KKDmcH8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSEIKDmGb0UNn.diag
[2025-11-24 06:40:25] -rw-r--r-- 1 boincer umatlas     21313 Nov 24 06:40 stderr.txt
[2025-11-24 06:40:25] HITS file was successfully produced:
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas 911918661 Nov 24 06:38 shared/HITS.pool.root.1
[2025-11-24 06:40:25]  *** Contents of shared directory: ***
[2025-11-24 06:40:25] total 1302856
[2025-11-24 06:40:25] -rw-r--r-- 2 boincer umatlas 409729625 Nov 23 11:28 ATLAS.root_0
[2025-11-24 06:40:25] -rw-r--r-- 2 boincer umatlas    590103 Nov 23 11:28 input.tar.gz
[2025-11-24 06:40:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 11:28 start_atlas.sh
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas 911918661 Nov 24 06:38 HITS.pool.root.1
[2025-11-24 06:40:25] -rw------- 1 boincer umatlas  11857920 Nov 24 06:40 result.tar.gz
06:40:26 (4044): run_atlas exited; CPU time 534803.594648
06:40:26 (4044): called boinc_finish(0)

</stderr_txt>
]]>

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