Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:43:54 (3042892): wrapper (7.7.26015): starting
10:43:54 (3042892): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 10:43:54] Arguments: --nthreads 3
[2025-11-26 10:43:54] Threads: 3
[2025-11-26 10:43:54] Checking for CVMFS
[2025-11-26 10:43:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:43:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:43:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:43:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:43:54] 2.9.2.0 1502042 11707 79664 153316 3 81 35569684 36864001 0 130560 0 4181122 99.866 677971 7787 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 10:43:54] CVMFS is ok
[2025-11-26 10:43:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:43:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:43:54] Further information can be found at the LHC@home message board.
[2025-11-26 10:43:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:43:54] Checking for apptainer binary...
[2025-11-26 10:43:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:43:54] Running /usr/bin/apptainer --version
[2025-11-26 10:43:54] apptainer version 1.4.1-1.1
[2025-11-26 10:43:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:43:54] atlasA223a
[2025-11-26 10:43:54] apptainer works
[2025-11-26 10:43:54] Set ATHENA_PROC_NUMBER=3
[2025-11-26 10:43:54] Set ATHENA_CORE_NUMBER=3
[2025-11-26 10:43:54] Starting ATLAS job with PandaID=6895346488
[2025-11-26 10:43:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:29:55]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:29:55] 2025-11-26 18:29:01,954 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 19:29:55] 2025-11-26 18:29:01,955 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:29:55] 2025-11-26 18:29:01,955 | INFO     | aborting loop
[2025-11-26 19:29:55] 2025-11-26 18:29:01,955 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:29:55] 2025-11-26 18:29:01,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:29:55] 2025-11-26 18:29:01,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:29:55] 2025-11-26 18:29:01,964 | INFO     | all payload control threads have been joined
[2025-11-26 19:29:55] 2025-11-26 18:29:02,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:29:55] 2025-11-26 18:29:02,956 | INFO     | all data control threads have been joined
[2025-11-26 19:29:55] 2025-11-26 18:29:02,960 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:02,961 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:02,962 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:02,969 | INFO     | [payload] control thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:02,977 | INFO     | all job control threads have been joined
[2025-11-26 19:29:55] 2025-11-26 18:29:03,001 [wrapper] supervise_pilot (15 min periods counter: 36)
[2025-11-26 19:29:55] 2025-11-26 18:29:03,149 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:03,300 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:03,397 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:03,655 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:03,697 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:03,962 | INFO     | [data] control thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:03,983 | INFO     | [job] control thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:04,307 | INFO     | [job] validate thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:04,383 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:04,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:29:55] 2025-11-26 18:29:04,532 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:08,527 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:12,523 | INFO     | job.realtimelogging is not enabled
[2025-11-26 19:29:55] 2025-11-26 18:29:13,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:29:55] 2025-11-26 18:29:49,640 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:29:55] 2025-11-26 18:29:50,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896150628160)>', '<ExcThread(monitor, started 139895649584896)>']
[2025-11-26 19:29:55] 2025-11-26 18:29:51,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:29:55] 2025-11-26 18:29:51,211 | INFO     | [monitor] control thread has ended
[2025-11-26 19:29:55] 2025-11-26 18:29:55,663 | INFO     | all workflow threads have been joined
[2025-11-26 19:29:55] 2025-11-26 18:29:55,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:29:55] 2025-11-26 18:29:55,664 | INFO     | traces error code: 0
[2025-11-26 19:29:55] 2025-11-26 18:29:55,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:29:55] 2025-11-26 18:29:55,714 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:29:55] 2025-11-26 18:29:55,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:29:55] 2025-11-26 18:29:55,720 [wrapper] pilotpid: 3046618
[2025-11-26 19:29:55] 2025-11-26 18:29:55,723 [wrapper] Pilot exit status: 0
[2025-11-26 19:29:55] 2025-11-26 18:29:55,730 [wrapper] pandaids: 6895346488
[2025-11-26 19:29:55] 2025-11-26 18:29:55,748 [wrapper] cleanup supervisor_pilot 3111217 3046619
[2025-11-26 19:29:55] 2025-11-26 18:29:55,751 [wrapper] Test setup, not cleaning
[2025-11-26 19:29:55] 2025-11-26 18:29:55,753 [wrapper] apfmon messages muted
[2025-11-26 19:29:55] 2025-11-26 18:29:55,756 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:29:55] 2025-11-26 18:29:55,758 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:29:55]  *** Error codes and diagnostics ***
[2025-11-26 19:29:55]     "exeErrorCode": 0,
[2025-11-26 19:29:55]     "exeErrorDiag": "",
[2025-11-26 19:29:55]     "pilotErrorCode": 0,
[2025-11-26 19:29:55]     "pilotErrorDiag": "",
[2025-11-26 19:29:55]  *** Listing of results directory ***
[2025-11-26 19:29:55] total 1307608
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc    576529 Nov 22 18:43 pilot3.tar.gz
[2025-11-26 19:29:55] -rwx------ 1 boinc boinc     36292 Nov 22 18:59 runpilot2-wrapper.sh
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc      5112 Nov 22 18:59 queuedata.json
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc       100 Nov 26 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:29:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 10:43 run_atlas
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc       105 Nov 26 10:43 job.xml
[2025-11-26 19:29:55] -rw-r--r-- 2 boinc boinc 409115988 Nov 26 10:43 EVNT.47483658._000458.pool.root.1
[2025-11-26 19:29:55] -rw-r--r-- 2 boinc boinc    590097 Nov 26 10:43 input.tar.gz
[2025-11-26 19:29:55] -rw-r--r-- 2 boinc boinc     15847 Nov 26 10:43 start_atlas.sh
[2025-11-26 19:29:55] drwxrwx--x 2 boinc boinc      4096 Nov 26 10:43 shared
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc         0 Nov 26 10:43 boinc_setup_complete
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc      6199 Nov 26 10:43 init_data.xml
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc         0 Nov 26 10:43 boinc_lockfile
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc      2781 Nov 26 10:43 pandaJob.out
[2025-11-26 19:29:55] -rw------- 1 boinc boinc    991827 Nov 26 10:44 agis_schedconf.cvmfs.json
[2025-11-26 19:29:55] drwx------ 5 boinc boinc      4096 Nov 26 10:44 pilot3
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc       531 Nov 26 19:25 boinc_task_state.xml
[2025-11-26 19:29:55] -rw------- 1 boinc boinc 914729695 Nov 26 19:28 HITS.47556137._004531.pool.root.1
[2025-11-26 19:29:55] -rw------- 1 boinc boinc        95 Nov 26 19:28 pilot_heartbeat.json
[2025-11-26 19:29:55] -rw------- 1 boinc boinc      1022 Nov 26 19:28 memory_monitor_summary.json
[2025-11-26 19:29:55] -rw------- 1 boinc boinc   1516240 Nov 26 19:28 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:29:55] -rw------- 1 boinc boinc   1193233 Nov 26 19:28 log.47556137._004531.job.log.tgz.1
[2025-11-26 19:29:55] -rw------- 1 boinc boinc      8569 Nov 26 19:29 heartbeat.json
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc      8192 Nov 26 19:29 boinc_mmap_file
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc        28 Nov 26 19:29 wrapper_checkpoint.txt
[2025-11-26 19:29:55] -rw------- 1 boinc boinc      4628 Nov 26 19:29 pilotlog.txt
[2025-11-26 19:29:55] -rw------- 1 boinc boinc   4426976 Nov 26 19:29 log.47556137._004531.job.log.1
[2025-11-26 19:29:55] -rw------- 1 boinc boinc       353 Nov 26 19:29 output.list
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc       620 Nov 26 19:29 runtime_log
[2025-11-26 19:29:55] -rw------- 1 boinc boinc   5642240 Nov 26 19:29 result.tar.gz
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc      8918 Nov 26 19:29 runtime_log.err
[2025-11-26 19:29:55] -rw------- 1 boinc boinc       669 Nov 26 19:29 AbcNDmT46g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVKKKDm3vL3bm.diag
[2025-11-26 19:29:55] -rw-r--r-- 1 boinc boinc      7190 Nov 26 19:29 stderr.txt
[2025-11-26 19:29:55] HITS file was successfully produced:
[2025-11-26 19:29:55] -rw------- 1 boinc boinc 914729695 Nov 26 19:28 shared/HITS.pool.root.1
[2025-11-26 19:29:55]  *** Contents of shared directory: ***
[2025-11-26 19:29:55] total 1298936
[2025-11-26 19:29:55] -rw-r--r-- 2 boinc boinc 409115988 Nov 26 10:43 ATLAS.root_0
[2025-11-26 19:29:55] -rw-r--r-- 2 boinc boinc    590097 Nov 26 10:43 input.tar.gz
[2025-11-26 19:29:55] -rw-r--r-- 2 boinc boinc     15847 Nov 26 10:43 start_atlas.sh
[2025-11-26 19:29:55] -rw------- 1 boinc boinc 914729695 Nov 26 19:28 HITS.pool.root.1
[2025-11-26 19:29:55] -rw------- 1 boinc boinc   5642240 Nov 26 19:29 result.tar.gz
19:29:57 (3042892): run_atlas exited; CPU time 93095.245598
19:29:57 (3042892): called boinc_finish(0)

</stderr_txt>
]]>

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