Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:41:23 (3364255): wrapper (7.7.26015): starting
11:41:23 (3364255): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 11:41:23] Arguments: --nthreads 9
[2025-11-23 11:41:23] Threads: 9
[2025-11-23 11:41:23] Checking for CVMFS
[2025-11-23 11:41:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 11:41:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 11:41:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 11:41:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 11:41:24] 2.13.3.0 3025293 4885 91988 153215 2 81 12647769 37030913 1932 16776704 0 5457979 99.897 633310 15938 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 11:41:24] CVMFS is ok
[2025-11-23 11:41:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 11:41:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 11:41:24] Further information can be found at the LHC@home message board.
[2025-11-23 11:41:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:41:24] Checking for apptainer binary...
[2025-11-23 11:41:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 11:41:24] Running /usr/bin/apptainer --version
[2025-11-23 11:41:24] apptainer version 1.4.4-1.el9
[2025-11-23 11:41:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:41:24] c-205-37.aglt2.org
[2025-11-23 11:41:24] apptainer works
[2025-11-23 11:41:24] Set ATHENA_PROC_NUMBER=9
[2025-11-23 11:41:24] Set ATHENA_CORE_NUMBER=9
[2025-11-23 11:41:24] Starting ATLAS job with PandaID=6895346071
[2025-11-23 11:41:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 20:41:31]  *** The last 200 lines of the pilot log: ***
[2025-11-23 20:41:31] 2025-11-24 01:40:34,677 | INFO     | monitor loop #2401: job 0:6895346071 is in state 'finished'
[2025-11-23 20:41:31] 2025-11-24 01:40:34,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,074 | INFO     | time since job start (32342s) is within the limit (172800.0s)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,575 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 20:41:31] 2025-11-24 01:40:36,582 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2731.08559375
[2025-11-23 20:41:31] 2025-11-24 01:40:36,588 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895346071/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,589 | INFO     | extracted standard info from prmon json
[2025-11-23 20:41:31] 2025-11-24 01:40:36,589 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 20:41:31] 2025-11-24 01:40:36,589 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 20:41:31] 2025-11-24 01:40:36,600 | INFO     | fitting pss+swap vs Time
[2025-11-23 20:41:31] 2025-11-24 01:40:36,601 | INFO     | sum of square deviations: 46163990091.745605
[2025-11-23 20:41:31] 2025-11-24 01:40:36,608 | INFO     | sum of deviations: 593470842975.7642
[2025-11-23 20:41:31] 2025-11-24 01:40:36,608 | INFO     | mean x: 1763932252.537736
[2025-11-23 20:41:31] 2025-11-24 01:40:36,609 | INFO     | mean y: 3108882.9867924526
[2025-11-23 20:41:31] 2025-11-24 01:40:36,609 | INFO     | intersect: -22673491618.512974
[2025-11-23 20:41:31] 2025-11-24 01:40:36,610 | INFO     | chi2: 5.149237742472667
[2025-11-23 20:41:31] 2025-11-24 01:40:36,611 | INFO     | sum of square deviations: 44869748669.2381
[2025-11-23 20:41:31] 2025-11-24 01:40:36,618 | INFO     | sum of deviations: 762342257591.1432
[2025-11-23 20:41:31] 2025-11-24 01:40:36,618 | INFO     | mean x: 1763932100.0380952
[2025-11-23 20:41:31] 2025-11-24 01:40:36,619 | INFO     | mean y: 3128751.742857143
[2025-11-23 20:41:31] 2025-11-24 01:40:36,619 | INFO     | intersect: -29966283140.738808
[2025-11-23 20:41:31] 2025-11-24 01:40:36,619 | INFO     | chi2: 2.470266424409135
[2025-11-23 20:41:31] 2025-11-24 01:40:36,620 | INFO     | current chi2=2.470266424409135 (change=52.026561057114606 %)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,620 | INFO     | sum of square deviations: 43599926309.23072
[2025-11-23 20:41:31] 2025-11-24 01:40:36,628 | INFO     | sum of deviations: 817660023795.9995
[2025-11-23 20:41:31] 2025-11-24 01:40:36,628 | INFO     | mean x: 1763931947.5384614
[2025-11-23 20:41:31] 2025-11-24 01:40:36,628 | INFO     | mean y: 3135366.25
[2025-11-23 20:41:31] 2025-11-24 01:40:36,628 | INFO     | intersect: -33077118668.34151
[2025-11-23 20:41:31] 2025-11-24 01:40:36,629 | INFO     | chi2: 1.9177247973554352
[2025-11-23 20:41:31] 2025-11-24 01:40:36,629 | INFO     | current chi2=1.9177247973554352 (change=22.367693686557015 %)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,629 | INFO     | right removable region: 519
[2025-11-23 20:41:31] 2025-11-24 01:40:36,630 | INFO     | sum of square deviations: 44869768554.31244
[2025-11-23 20:41:31] 2025-11-24 01:40:36,638 | INFO     | sum of deviations: 458408025130.9718
[2025-11-23 20:41:31] 2025-11-24 01:40:36,638 | INFO     | mean x: 1763932405.0361905
[2025-11-23 20:41:31] 2025-11-24 01:40:36,638 | INFO     | mean y: 3124748.685714286
[2025-11-23 20:41:31] 2025-11-24 01:40:36,638 | INFO     | intersect: -18017934782.263233
[2025-11-23 20:41:31] 2025-11-24 01:40:36,639 | INFO     | chi2: 3.3248095340551327
[2025-11-23 20:41:31] 2025-11-24 01:40:36,639 | INFO     | current chi2=3.3248095340551327 (change=35.43103464361393 %)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,640 | INFO     | sum of square deviations: 43599934299.30581
[2025-11-23 20:41:31] 2025-11-24 01:40:36,647 | INFO     | sum of deviations: 425690566903.20215
[2025-11-23 20:41:31] 2025-11-24 01:40:36,647 | INFO     | mean x: 1763932557.5365384
[2025-11-23 20:41:31] 2025-11-24 01:40:36,647 | INFO     | mean y: 3128674.278846154
[2025-11-23 20:41:31] 2025-11-24 01:40:36,647 | INFO     | intersect: -17219132378.731495
[2025-11-23 20:41:31] 2025-11-24 01:40:36,648 | INFO     | chi2: 3.296649694542804
[2025-11-23 20:41:31] 2025-11-24 01:40:36,648 | INFO     | current chi2=3.296649694542804 (change=0.8469609829945114 %)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,649 | INFO     | left removable region: 20
[2025-11-23 20:41:31] 2025-11-24 01:40:36,649 | INFO     | sum of square deviations: 38528033117.35072
[2025-11-23 20:41:31] 2025-11-24 01:40:36,656 | INFO     | sum of deviations: 606658174532.3488
[2025-11-23 20:41:31] 2025-11-24 01:40:36,656 | INFO     | mean x: 1763932527.0360723
[2025-11-23 20:41:31] 2025-11-24 01:40:36,656 | INFO     | mean y: 3160752.6472945893
[2025-11-23 20:41:31] 2025-11-24 01:40:36,656 | INFO     | intersect: -27771526929.71004
[2025-11-23 20:41:31] 2025-11-24 01:40:36,657 | INFO     | chi2: 0.03722295484936443
[2025-11-23 20:41:31] 2025-11-24 01:40:36,657 | INFO     | current memory leak: 15.75 B/s (using 499 data points, chi2=0.04)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,658 | INFO     | could have reported an average CPU frequency of 2615 MHz (21 samples)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,658 | INFO     | ..............................
[2025-11-23 20:41:31] 2025-11-24 01:40:36,658 | INFO     | . Timing measurements:
[2025-11-23 20:41:31] 2025-11-24 01:40:36,658 | INFO     | . get job = 0 s
[2025-11-23 20:41:31] 2025-11-24 01:40:36,658 | INFO     | . initial setup = 2 s
[2025-11-23 20:41:31] 2025-11-24 01:40:36,659 | INFO     | . payload setup = 5 s
[2025-11-23 20:41:31] 2025-11-24 01:40:36,659 | INFO     | . stage-in = 0 s
[2025-11-23 20:41:31] 2025-11-24 01:40:36,659 | INFO     | . payload execution = 32305 s
[2025-11-23 20:41:31] 2025-11-24 01:40:36,659 | INFO     | . stage-out = 3 s
[2025-11-23 20:41:31] 2025-11-24 01:40:36,659 | INFO     | . log creation = 0 s
[2025-11-23 20:41:31] 2025-11-24 01:40:36,659 | INFO     | ..............................
[2025-11-23 20:41:31] 2025-11-24 01:40:36,766 | INFO     | 
[2025-11-23 20:41:31] 2025-11-24 01:40:36,766 | INFO     | job summary report
[2025-11-23 20:41:31] 2025-11-24 01:40:36,766 | INFO     | --------------------------------------------------
[2025-11-23 20:41:31] 2025-11-24 01:40:36,766 | INFO     | PanDA job id: 6895346071
[2025-11-23 20:41:31] 2025-11-24 01:40:36,767 | INFO     | task id: 47556137
[2025-11-23 20:41:31] 2025-11-24 01:40:36,767 | INFO     | errors: (none)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,767 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 20:41:31] 2025-11-24 01:40:36,767 | INFO     | pilot state: finished 
[2025-11-23 20:41:31] 2025-11-24 01:40:36,767 | INFO     | transexitcode: 0
[2025-11-23 20:41:31] 2025-11-24 01:40:36,767 | INFO     | exeerrorcode: 0
[2025-11-23 20:41:31] 2025-11-24 01:40:36,767 | INFO     | exeerrordiag: 
[2025-11-23 20:41:31] 2025-11-24 01:40:36,767 | INFO     | exitcode: 0
[2025-11-23 20:41:31] 2025-11-24 01:40:36,767 | INFO     | exitmsg: OK
[2025-11-23 20:41:31] 2025-11-24 01:40:36,768 | INFO     | cpuconsumptiontime: 284964 s
[2025-11-23 20:41:31] 2025-11-24 01:40:36,768 | INFO     | nevents: 1000
[2025-11-23 20:41:31] 2025-11-24 01:40:36,768 | INFO     | neventsw: 0
[2025-11-23 20:41:31] 2025-11-24 01:40:36,768 | INFO     | pid: 3374380
[2025-11-23 20:41:31] 2025-11-24 01:40:36,768 | INFO     | pgrp: 3374380
[2025-11-23 20:41:31] 2025-11-24 01:40:36,768 | INFO     | corecount: 9
[2025-11-23 20:41:31] 2025-11-24 01:40:36,768 | INFO     | event service: False
[2025-11-23 20:41:31] 2025-11-24 01:40:36,768 | INFO     | sizes: {0: 2298756, 1: 2298756, 4: 2299046, 11: 2299074, 32313: 2338772, 32318: 2347766, 32321: 2347950, 32327: 2348196}
[2025-11-23 20:41:31] 2025-11-24 01:40:36,769 | INFO     | --------------------------------------------------
[2025-11-23 20:41:31] 2025-11-24 01:40:36,769 | INFO     | 
[2025-11-23 20:41:31] 2025-11-24 01:40:36,769 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 20:41:31] 2025-11-24 01:40:36,785 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,786 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 20:41:31] 2025-11-24 01:40:36,788 | INFO     | job 6895346071 has completed (purged errors)
[2025-11-23 20:41:31] 2025-11-24 01:40:36,788 | INFO     | overall cleanup function is called
[2025-11-23 20:41:31] 2025-11-24 01:40:37,805 | INFO     | --- collectZombieJob: --- 10, [3374380]
[2025-11-23 20:41:31] 2025-11-24 01:40:37,805 | INFO     | zombie collector waiting for pid 3374380
[2025-11-23 20:41:31] 2025-11-24 01:40:37,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 20:41:31] 2025-11-24 01:40:37,805 | INFO     | collected zombie processes
[2025-11-23 20:41:31] 2025-11-24 01:40:37,805 | INFO     | will attempt to kill all subprocesses of pid=3374380
[2025-11-23 20:41:31] 2025-11-24 01:40:37,998 | INFO     | process IDs to be killed: [3374380] (in reverse order)
[2025-11-23 20:41:31] 2025-11-24 01:40:38,054 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 20:41:31] 2025-11-24 01:40:38,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 20:41:31] 2025-11-24 01:40:38,061 | INFO     | did not find any defunct processes belonging to 3374380
[2025-11-23 20:41:31] 2025-11-24 01:40:38,067 | INFO     | did not find any defunct processes belonging to 3374380
[2025-11-23 20:41:31] 2025-11-24 01:40:38,068 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 20:41:31] 2025-11-24 01:40:38,068 | INFO     | ready for new job
[2025-11-23 20:41:31] 2025-11-24 01:40:38,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 20:41:31] 2025-11-24 01:40:38,071 | INFO     | ***************************************
[2025-11-23 20:41:31] 2025-11-24 01:40:38,072 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 20:41:31] 2025-11-24 01:40:38,072 | INFO     | ***************************************
[2025-11-23 20:41:31] 2025-11-24 01:40:38,072 | INFO     | 
[2025-11-23 20:41:31] 2025-11-24 01:40:38,074 | INFO     | architecture information:
[2025-11-23 20:41:31] 2025-11-24 01:40:38,074 | INFO     | executing command: cat /etc/os-release
[2025-11-23 20:41:31] 2025-11-24 01:40:38,087 | INFO     | cat /etc/os-release:
[2025-11-23 20:41:31] NAME="CentOS Linux"
[2025-11-23 20:41:31] VERSION="7 (Core)"
[2025-11-23 20:41:31] ID="centos"
[2025-11-23 20:41:31] ID_LIKE="rhel fedora"
[2025-11-23 20:41:31] VERSION_ID="7"
[2025-11-23 20:41:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 20:41:31] ANSI_COLOR="0;31"
[2025-11-23 20:41:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 20:41:31] HOME_URL="https://www.centos.org/"
[2025-11-23 20:41:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 20:41:31] 
[2025-11-23 20:41:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 20:41:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 20:41:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 20:41:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 20:41:31] 
[2025-11-23 20:41:31] 2025-11-24 01:40:38,087 | INFO     | ***************************************
[2025-11-23 20:41:31] 2025-11-24 01:40:38,590 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 20:41:31] 2025-11-24 01:40:38,603 | INFO     | sufficient remaining disk space (39107690496 B)
[2025-11-23 20:41:31] 2025-11-24 01:40:38,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 20:41:31] 2025-11-24 01:40:38,604 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 20:41:31] 2025-11-24 01:40:38,604 | INFO     | update_server=False
[2025-11-23 20:41:31] 2025-11-24 01:40:38,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 20:41:31] 2025-11-24 01:40:38,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:41:31] 2025-11-24 01:40:38,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:41:31] 2025-11-24 01:40:38,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 20:41:31] 2025-11-24 01:40:38,605 | INFO     | aborting loop
[2025-11-23 20:41:31] 2025-11-24 01:40:39,240 | INFO     | all data control threads have been joined
[2025-11-23 20:41:31] 2025-11-24 01:40:39,264 | INFO     | all payload control threads have been joined
[2025-11-23 20:41:31] 2025-11-24 01:40:39,554 | INFO     | all job control threads have been joined
[2025-11-23 20:41:31] 2025-11-24 01:40:39,610 | INFO     | [job] retrieve thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:39,610 | INFO     | [job] queue monitor thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:39,611 | INFO     | [job] job monitor thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:39,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:39,878 | INFO     | [job] validate thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:40,071 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:40,116 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:40,246 | INFO     | [data] control thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:40,269 | INFO     | [payload] control thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:40,503 | INFO     | [payload] validate_post thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:40,559 | INFO     | [job] control thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:40,611 | INFO     | [data] copytool_out thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:40,709 | INFO     | [data] copytool_in thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:40,878 | INFO     | [payload] failed_post thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:40,896 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:40:41,328 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 20:41:31] 2025-11-24 01:40:45,333 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 20:41:31] 2025-11-24 01:41:09,385 | INFO     | PID=3367941 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 20:41:31] 2025-11-24 01:41:09,385 | INFO     | .. there are 3 such processes running
[2025-11-23 20:41:31] 2025-11-24 01:41:09,386 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 20:41:31] 2025-11-24 01:41:09,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 20:41:31] 2025-11-24 01:41:09,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 20:41:31] 2025-11-24 01:41:25,528 | INFO     | [monitor] cgroup control has ended
[2025-11-23 20:41:31] 2025-11-24 01:41:25,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140139462317888)>', '<ExcThread(monitor, started 140138961147648)>']
[2025-11-23 20:41:31] 2025-11-24 01:41:26,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 20:41:31] 2025-11-24 01:41:26,468 | INFO     | [monitor] control thread has ended
[2025-11-23 20:41:31] 2025-11-24 01:41:30,916 | INFO     | all workflow threads have been joined
[2025-11-23 20:41:31] 2025-11-24 01:41:30,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 20:41:31] 2025-11-24 01:41:30,917 | INFO     | traces error code: 0
[2025-11-23 20:41:31] 2025-11-24 01:41:30,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 20:41:31] 2025-11-24 01:41:31,019 [wrapper] ==== pilot stdout END ====
[2025-11-23 20:41:31] 2025-11-24 01:41:31,022 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 20:41:31] 2025-11-24 01:41:31,024 [wrapper] pilotpid: 3367941
[2025-11-23 20:41:31] 2025-11-24 01:41:31,027 [wrapper] Pilot exit status: 0
[2025-11-23 20:41:31] 2025-11-24 01:41:31,035 [wrapper] pandaids: 6895346071
[2025-11-23 20:41:31] 2025-11-24 01:41:31,073 [wrapper] cleanup supervisor_pilot 3836655 3367942
[2025-11-23 20:41:31] 2025-11-24 01:41:31,075 [wrapper] Test setup, not cleaning
[2025-11-23 20:41:31] 2025-11-24 01:41:31,078 [wrapper] apfmon messages muted
[2025-11-23 20:41:31] 2025-11-24 01:41:31,080 [wrapper] ==== wrapper stdout END ====
[2025-11-23 20:41:31] 2025-11-24 01:41:31,082 [wrapper] ==== wrapper stderr END ====
[2025-11-23 20:41:31]  *** Error codes and diagnostics ***
[2025-11-23 20:41:31]     "exeErrorCode": 0,
[2025-11-23 20:41:31]     "exeErrorDiag": "",
[2025-11-23 20:41:31]     "pilotErrorCode": 0,
[2025-11-23 20:41:31]     "pilotErrorDiag": "",
[2025-11-23 20:41:31]  *** Listing of results directory ***
[2025-11-23 20:41:31] total 1318056
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 12:43 pilot3.tar.gz
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 12:49 queuedata.json
[2025-11-23 20:41:31] -rwx------. 1 boincer umatlas     36292 Nov 22 12:49 runpilot2-wrapper.sh
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas       100 Nov 23 11:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 20:41:31] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 11:41 run_atlas
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas       105 Nov 23 11:41 job.xml
[2025-11-23 20:41:31] -rw-r--r--. 2 boincer umatlas 410053950 Nov 23 11:41 EVNT.47483658._000453.pool.root.1
[2025-11-23 20:41:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 11:41 start_atlas.sh
[2025-11-23 20:41:31] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 11:41 shared
[2025-11-23 20:41:31] -rw-r--r--. 2 boincer umatlas    590104 Nov 23 11:41 input.tar.gz
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas         0 Nov 23 11:41 boinc_lockfile
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 11:41 pandaJob.out
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas    989785 Nov 23 11:41 agis_schedconf.cvmfs.json
[2025-11-23 20:41:31] drwx------. 5 boincer umatlas      4096 Nov 23 11:41 pilot3
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas       532 Nov 23 20:30 boinc_task_state.xml
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas      6530 Nov 23 20:37 init_data.xml
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas 922628818 Nov 23 20:39 HITS.47556137._004485.pool.root.1
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas      1047 Nov 23 20:40 memory_monitor_summary.json
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas   1526164 Nov 23 20:40 agis_ddmendpoints.agis.ALL.json
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas   1932479 Nov 23 20:40 log.47556137._004485.job.log.tgz.1
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas      8631 Nov 23 20:40 heartbeat.json
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas        95 Nov 23 20:41 pilot_heartbeat.json
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas        29 Nov 23 20:41 wrapper_checkpoint.txt
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 20:41 boinc_mmap_file
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas      4823 Nov 23 20:41 pilotlog.txt
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas   4609029 Nov 23 20:41 log.47556137._004485.job.log.1
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas       353 Nov 23 20:41 output.list
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas       620 Nov 23 20:41 runtime_log
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas   6563840 Nov 23 20:41 result.tar.gz
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas      8818 Nov 23 20:41 runtime_log.err
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas       659 Nov 23 20:41 9sEODmou6g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtJKKDmYihbgm.diag
[2025-11-23 20:41:31] -rw-r--r--. 1 boincer umatlas     21322 Nov 23 20:41 stderr.txt
[2025-11-23 20:41:31] HITS file was successfully produced:
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas 922628818 Nov 23 20:39 shared/HITS.pool.root.1
[2025-11-23 20:41:31]  *** Contents of shared directory: ***
[2025-11-23 20:41:31] total 1308464
[2025-11-23 20:41:31] -rw-r--r--. 2 boincer umatlas 410053950 Nov 23 11:41 ATLAS.root_0
[2025-11-23 20:41:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 11:41 start_atlas.sh
[2025-11-23 20:41:31] -rw-r--r--. 2 boincer umatlas    590104 Nov 23 11:41 input.tar.gz
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas 922628818 Nov 23 20:39 HITS.pool.root.1
[2025-11-23 20:41:31] -rw-------. 1 boincer umatlas   6563840 Nov 23 20:41 result.tar.gz
20:41:32 (3364255): run_atlas exited; CPU time 285291.838010
20:41:32 (3364255): called boinc_finish(0)

</stderr_txt>
]]>

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