Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:57:36 (3558094): wrapper (7.7.26015): starting
16:57:36 (3558094): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 16:57:36] Arguments: --nthreads 3
[2025-11-23 16:57:36] Threads: 3
[2025-11-23 16:57:36] Checking for CVMFS
[2025-11-23 16:57:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 16:57:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 16:57:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 16:57:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 16:57:37] 2.9.2.0 2932062 369 70704 153213 3 88 34867334 36864001 0 130560 0 1852688 99.999 14506 19629 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 16:57:37] CVMFS is ok
[2025-11-23 16:57:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 16:57:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 16:57:37] Further information can be found at the LHC@home message board.
[2025-11-23 16:57:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 16:57:37] Checking for apptainer binary...
[2025-11-23 16:57:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 16:57:37] Running /usr/bin/apptainer --version
[2025-11-23 16:57:37] apptainer version 1.4.1-1.1
[2025-11-23 16:57:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 16:57:37] thA335
[2025-11-23 16:57:37] apptainer works
[2025-11-23 16:57:37] Set ATHENA_PROC_NUMBER=3
[2025-11-23 16:57:37] Set ATHENA_CORE_NUMBER=3
[2025-11-23 16:57:37] Starting ATLAS job with PandaID=6895329326
[2025-11-23 16:57:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:01:54]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:01:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:01:54] 
[2025-11-23 17:01:54] 2025-11-23 16:01:02,540 | INFO     | ***************************************
[2025-11-23 17:01:54] 2025-11-23 16:01:03,043 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 17:01:54] 2025-11-23 16:01:03,057 | INFO     | sufficient remaining disk space (827995455488 B)
[2025-11-23 17:01:54] 2025-11-23 16:01:03,058 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:01:54] 2025-11-23 16:01:03,058 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:01:54] 2025-11-23 16:01:03,058 | INFO     | update_server=False
[2025-11-23 17:01:54] 2025-11-23 16:01:03,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:01:54] 2025-11-23 16:01:03,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:01:54] 2025-11-23 16:01:03,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:01:54] 2025-11-23 16:01:03,058 | INFO     | aborting loop
[2025-11-23 17:01:54] 2025-11-23 16:01:03,061 | INFO     | all data control threads have been joined
[2025-11-23 17:01:54] 2025-11-23 16:01:03,354 | INFO     | all job control threads have been joined
[2025-11-23 17:01:54] 2025-11-23 16:01:03,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:01:54] 2025-11-23 16:01:04,063 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:04,064 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:04,064 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:04,067 | INFO     | [data] control thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:04,109 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:04,297 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:04,360 | INFO     | [job] control thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:04,496 | INFO     | all payload control threads have been joined
[2025-11-23 17:01:54] 2025-11-23 16:01:05,050 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:05,089 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:05,117 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:05,474 | INFO     | [job] validate thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:05,503 | INFO     | [payload] control thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:05,559 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:05,631 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:05,745 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:06,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:01:54] 2025-11-23 16:01:10,163 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:01:54] 2025-11-23 16:01:33,592 | INFO     | PID=3561834 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 17:01:54] 2025-11-23 16:01:33,592 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:01:54] 2025-11-23 16:01:33,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:01:54] 2025-11-23 16:01:33,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:01:54] 2025-11-23 16:01:48,733 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:01:54] 2025-11-23 16:01:49,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140567613839168)>', '<ExcThread(monitor, started 140566755010304)>']
[2025-11-23 17:01:54] 2025-11-23 16:01:50,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:01:54] 2025-11-23 16:01:50,683 | INFO     | [monitor] control thread has ended
[2025-11-23 17:01:54] 2025-11-23 16:01:54,833 | INFO     | all workflow threads have been joined
[2025-11-23 17:01:54] 2025-11-23 16:01:54,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:01:54] 2025-11-23 16:01:54,834 | INFO     | traces error code: 0
[2025-11-23 17:01:54] 2025-11-23 16:01:54,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:01:54] 2025-11-23 16:01:54,881 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:01:54] 2025-11-23 16:01:54,884 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:01:54] 2025-11-23 16:01:54,887 [wrapper] pilotpid: 3561834
[2025-11-23 17:01:54] 2025-11-23 16:01:54,890 [wrapper] Pilot exit status: 0
[2025-11-23 17:01:54] 2025-11-23 16:01:54,897 [wrapper] pandaids: 6895329326
[2025-11-23 17:01:54] 2025-11-23 16:01:54,913 [wrapper] cleanup supervisor_pilot 3561840 3561835
[2025-11-23 17:01:54] 2025-11-23 16:01:54,916 [wrapper] Test setup, not cleaning
[2025-11-23 17:01:54] 2025-11-23 16:01:54,918 [wrapper] apfmon messages muted
[2025-11-23 17:01:54] 2025-11-23 16:01:54,921 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:01:54] 2025-11-23 16:01:54,923 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:01:54]  *** Error codes and diagnostics ***
[2025-11-23 17:01:54]     "exeErrorCode": 65,
[2025-11-23 17:01:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 17:01:54]     "pilotErrorCode": 1305,
[2025-11-23 17:01:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 17:01:54]  *** Listing of results directory ***
[2025-11-23 17:01:54] total 402808
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc    576529 Nov 21 19:54 pilot3.tar.gz
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc      5112 Nov 21 19:57 queuedata.json
[2025-11-23 17:01:54] -rwx------ 1 boinc boinc     36292 Nov 21 19:58 runpilot2-wrapper.sh
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc       100 Nov 23 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:01:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 16:57 run_atlas
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc       105 Nov 23 16:57 job.xml
[2025-11-23 17:01:54] -rw-r--r-- 2 boinc boinc 408270017 Nov 23 16:57 EVNT.47483658._000111.pool.root.1
[2025-11-23 17:01:54] -rw-r--r-- 2 boinc boinc    590097 Nov 23 16:57 input.tar.gz
[2025-11-23 17:01:54] -rw-r--r-- 2 boinc boinc     15847 Nov 23 16:57 start_atlas.sh
[2025-11-23 17:01:54] drwxrwx--x 2 boinc boinc      4096 Nov 23 16:57 shared
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc         0 Nov 23 16:57 boinc_setup_complete
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc      6194 Nov 23 16:57 init_data.xml
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc         0 Nov 23 16:57 boinc_lockfile
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc      2785 Nov 23 16:57 pandaJob.out
[2025-11-23 17:01:54] -rw------- 1 boinc boinc    989785 Nov 23 16:57 agis_schedconf.cvmfs.json
[2025-11-23 17:01:54] -rw------- 1 boinc boinc   1526164 Nov 23 16:57 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:01:54] drwx------ 5 boinc boinc      4096 Nov 23 16:57 pilot3
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc       522 Nov 23 16:58 boinc_task_state.xml
[2025-11-23 17:01:54] -rw------- 1 boinc boinc       959 Nov 23 16:58 memory_monitor_summary.json
[2025-11-23 17:01:54] -rw------- 1 boinc boinc     56104 Nov 23 16:58 log.47556137._001109.job.log.tgz.1
[2025-11-23 17:01:54] -rw------- 1 boinc boinc        95 Nov 23 17:00 pilot_heartbeat.json
[2025-11-23 17:01:54] -rw------- 1 boinc boinc      8399 Nov 23 17:01 heartbeat.json
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc        22 Nov 23 17:01 wrapper_checkpoint.txt
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc      8192 Nov 23 17:01 boinc_mmap_file
[2025-11-23 17:01:54] -rw------- 1 boinc boinc      4752 Nov 23 17:01 pilotlog.txt
[2025-11-23 17:01:54] -rw------- 1 boinc boinc     93268 Nov 23 17:01 log.47556137._001109.job.log.1
[2025-11-23 17:01:54] -rw------- 1 boinc boinc       186 Nov 23 17:01 output.list
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc       620 Nov 23 17:01 runtime_log
[2025-11-23 17:01:54] -rw------- 1 boinc boinc    174080 Nov 23 17:01 result.tar.gz
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc      8744 Nov 23 17:01 runtime_log.err
[2025-11-23 17:01:54] -rw------- 1 boinc boinc       649 Nov 23 17:01 XCsNDmiVlg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmeJKDmNqnbJm.diag
[2025-11-23 17:01:54] -rw-r--r-- 1 boinc boinc      8417 Nov 23 17:01 stderr.txt
[2025-11-23 17:01:54] No HITS result produced
[2025-11-23 17:01:54]  *** Contents of shared directory: ***
[2025-11-23 17:01:54] total 399476
[2025-11-23 17:01:54] -rw-r--r-- 2 boinc boinc 408270017 Nov 23 16:57 ATLAS.root_0
[2025-11-23 17:01:54] -rw-r--r-- 2 boinc boinc    590097 Nov 23 16:57 input.tar.gz
[2025-11-23 17:01:54] -rw-r--r-- 2 boinc boinc     15847 Nov 23 16:57 start_atlas.sh
[2025-11-23 17:01:54] -rw------- 1 boinc boinc    174080 Nov 23 17:01 result.tar.gz
17:01:56 (3558094): run_atlas exited; CPU time 31.705212
17:01:56 (3558094): called boinc_finish(0)

</stderr_txt>
]]>

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