Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:29:05 (19590): wrapper (7.7.26015): starting
10:29:05 (19590): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 10:29:05] Arguments: --nthreads 8
[2025-11-23 10:29:05] Threads: 8
[2025-11-23 10:29:05] Checking for CVMFS
[2025-11-23 10:29:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:29:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:29:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:29:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:29:05] 2.11.2.0 14729 113528 147492 153213 0 57 16730843 18432000 1885 130560 0 81826762 99.974 4731223 29276 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 10:29:05] CVMFS is ok
[2025-11-23 10:29:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:29:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:29:05] Further information can be found at the LHC@home message board.
[2025-11-23 10:29:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:29:05] Checking for apptainer binary...
[2025-11-23 10:29:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:29:05] Running /usr/bin/apptainer --version
[2025-11-23 10:29:05] apptainer version 1.3.2-1.el7
[2025-11-23 10:29:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:29:06] c-206-30.aglt2.org
[2025-11-23 10:29:06] apptainer works
[2025-11-23 10:29:06] Set ATHENA_PROC_NUMBER=8
[2025-11-23 10:29:06] Set ATHENA_CORE_NUMBER=8
[2025-11-23 10:29:06] Starting ATLAS job with PandaID=6895333835
[2025-11-23 10:29:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 06:08:21]  *** The last 200 lines of the pilot log: ***
[2025-11-24 06:08:21] 2025-11-24 11:07:39,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 06:08:21] 2025-11-24 11:07:39,842 | INFO     | time since job start (70702s) is within the limit (172800.0s)
[2025-11-24 06:08:21] 2025-11-24 11:07:41,848 | INFO     | time since job start (70704s) is within the limit (172800.0s)
[2025-11-24 06:08:21] 2025-11-24 11:07:41,920 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 06:08:21] 2025-11-24 11:07:41,927 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2439.0833333333335
[2025-11-24 06:08:21] 2025-11-24 11:07:41,931 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895333835/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 06:08:21] 2025-11-24 11:07:41,932 | INFO     | extracted standard info from prmon json
[2025-11-24 06:08:21] 2025-11-24 11:07:41,932 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 06:08:21] 2025-11-24 11:07:41,932 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 06:08:21] 2025-11-24 11:07:41,963 | INFO     | fitting pss+swap vs Time
[2025-11-24 06:08:21] 2025-11-24 11:07:41,965 | INFO     | sum of square deviations: 482756400011.9467
[2025-11-24 06:08:21] 2025-11-24 11:07:42,011 | INFO     | sum of deviations: 2149773445704.7659
[2025-11-24 06:08:21] 2025-11-24 11:07:42,011 | INFO     | mean x: 1763947102.630716
[2025-11-24 06:08:21] 2025-11-24 11:07:42,011 | INFO     | mean y: 2874038.714408973
[2025-11-24 06:08:21] 2025-11-24 11:07:42,011 | INFO     | intersect: -7852198707.642823
[2025-11-24 06:08:21] 2025-11-24 11:07:42,013 | INFO     | chi2: 5.432635382931436
[2025-11-24 06:08:21] 2025-11-24 11:07:42,015 | INFO     | sum of square deviations: 476535603997.44946
[2025-11-24 06:08:21] 2025-11-24 11:07:42,063 | INFO     | sum of deviations: 2507128193191.376
[2025-11-24 06:08:21] 2025-11-24 11:07:42,063 | INFO     | mean x: 1763946950.1334488
[2025-11-24 06:08:21] 2025-11-24 11:07:42,063 | INFO     | mean y: 2882794.679376083
[2025-11-24 06:08:21] 2025-11-24 11:07:42,063 | INFO     | intersect: -9277517437.48708
[2025-11-24 06:08:21] 2025-11-24 11:07:42,065 | INFO     | chi2: 2.6694475807963465
[2025-11-24 06:08:21] 2025-11-24 11:07:42,065 | INFO     | current chi2=2.6694475807963465 (change=50.862750900173246 %)
[2025-11-24 06:08:21] 2025-11-24 11:07:42,067 | INFO     | sum of square deviations: 470368483407.9338
[2025-11-24 06:08:21] 2025-11-24 11:07:42,101 | INFO     | sum of deviations: 2611834946033.448
[2025-11-24 06:08:21] 2025-11-24 11:07:42,102 | INFO     | mean x: 1763946797.6362054
[2025-11-24 06:08:21] 2025-11-24 11:07:42,102 | INFO     | mean y: 2885379.9651871193
[2025-11-24 06:08:21] 2025-11-24 11:07:42,102 | INFO     | intersect: -9791856511.817614
[2025-11-24 06:08:21] 2025-11-24 11:07:42,103 | INFO     | chi2: 2.275351610910296
[2025-11-24 06:08:21] 2025-11-24 11:07:42,103 | INFO     | current chi2=2.275351610910296 (change=14.763203170615713 %)
[2025-11-24 06:08:21] 2025-11-24 11:07:42,103 | INFO     | right removable region: 1148
[2025-11-24 06:08:21] 2025-11-24 11:07:42,105 | INFO     | sum of square deviations: 476535158087.4488
[2025-11-24 06:08:21] 2025-11-24 11:07:42,138 | INFO     | sum of deviations: 1848989837173.5984
[2025-11-24 06:08:21] 2025-11-24 11:07:42,139 | INFO     | mean x: 1763947255.1334488
[2025-11-24 06:08:21] 2025-11-24 11:07:42,139 | INFO     | mean y: 2881403.5155979204
[2025-11-24 06:08:21] 2025-11-24 11:07:42,139 | INFO     | intersect: -6841357668.249786
[2025-11-24 06:08:21] 2025-11-24 11:07:42,141 | INFO     | chi2: 3.3872685368872344
[2025-11-24 06:08:21] 2025-11-24 11:07:42,141 | INFO     | current chi2=3.3872685368872344 (change=37.649624940235306 %)
[2025-11-24 06:08:21] 2025-11-24 11:07:42,142 | INFO     | sum of square deviations: 470367661860.2066
[2025-11-24 06:08:21] 2025-11-24 11:07:42,169 | INFO     | sum of deviations: 1773693374665.6116
[2025-11-24 06:08:21] 2025-11-24 11:07:42,169 | INFO     | mean x: 1763947407.635335
[2025-11-24 06:08:21] 2025-11-24 11:07:42,169 | INFO     | mean y: 2883265.0539599652
[2025-11-24 06:08:21] 2025-11-24 11:07:42,169 | INFO     | intersect: -6648725856.644601
[2025-11-24 06:08:21] 2025-11-24 11:07:42,170 | INFO     | chi2: 3.335617276707056
[2025-11-24 06:08:21] 2025-11-24 11:07:42,171 | INFO     | current chi2=3.335617276707056 (change=1.5248646399805037 %)
[2025-11-24 06:08:21] 2025-11-24 11:07:42,171 | INFO     | left removable region: 20
[2025-11-24 06:08:21] 2025-11-24 11:07:42,172 | INFO     | sum of square deviations: 445046029445.3053
[2025-11-24 06:08:21] 2025-11-24 11:07:42,201 | INFO     | sum of deviations: 2134310844825.4302
[2025-11-24 06:08:21] 2025-11-24 11:07:42,201 | INFO     | mean x: 1763947377.141844
[2025-11-24 06:08:21] 2025-11-24 11:07:42,202 | INFO     | mean y: 2897141.753546099
[2025-11-24 06:08:21] 2025-11-24 11:07:42,202 | INFO     | intersect: -8456479569.072483
[2025-11-24 06:08:21] 2025-11-24 11:07:42,203 | INFO     | chi2: 0.14575356301197018
[2025-11-24 06:08:21] 2025-11-24 11:07:42,204 | INFO     | current memory leak: 4.80 B/s (using 1128 data points, chi2=0.15)
[2025-11-24 06:08:21] 2025-11-24 11:07:42,205 | INFO     | could have reported an average CPU frequency of 2634 MHz (42 samples)
[2025-11-24 06:08:21] 2025-11-24 11:07:42,205 | INFO     | ..............................
[2025-11-24 06:08:21] 2025-11-24 11:07:42,205 | INFO     | . Timing measurements:
[2025-11-24 06:08:21] 2025-11-24 11:07:42,205 | INFO     | . get job = 0 s
[2025-11-24 06:08:21] 2025-11-24 11:07:42,206 | INFO     | . initial setup = 2 s
[2025-11-24 06:08:21] 2025-11-24 11:07:42,206 | INFO     | . payload setup = 5 s
[2025-11-24 06:08:21] 2025-11-24 11:07:42,206 | INFO     | . stage-in = 0 s
[2025-11-24 06:08:21] 2025-11-24 11:07:42,206 | INFO     | . payload execution = 70671 s
[2025-11-24 06:08:21] 2025-11-24 11:07:42,206 | INFO     | . stage-out = 4 s
[2025-11-24 06:08:21] 2025-11-24 11:07:42,206 | INFO     | . log creation = 0 s
[2025-11-24 06:08:21] 2025-11-24 11:07:42,207 | INFO     | ..............................
[2025-11-24 06:08:21] 2025-11-24 11:07:42,433 | INFO     | 
[2025-11-24 06:08:21] 2025-11-24 11:07:42,433 | INFO     | job summary report
[2025-11-24 06:08:21] 2025-11-24 11:07:42,433 | INFO     | --------------------------------------------------
[2025-11-24 06:08:21] 2025-11-24 11:07:42,433 | INFO     | PanDA job id: 6895333835
[2025-11-24 06:08:21] 2025-11-24 11:07:42,434 | INFO     | task id: 47556137
[2025-11-24 06:08:21] 2025-11-24 11:07:42,434 | INFO     | errors: (none)
[2025-11-24 06:08:21] 2025-11-24 11:07:42,434 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 06:08:21] 2025-11-24 11:07:42,434 | INFO     | pilot state: finished 
[2025-11-24 06:08:21] 2025-11-24 11:07:42,434 | INFO     | transexitcode: 0
[2025-11-24 06:08:21] 2025-11-24 11:07:42,434 | INFO     | exeerrorcode: 0
[2025-11-24 06:08:21] 2025-11-24 11:07:42,435 | INFO     | exeerrordiag: 
[2025-11-24 06:08:21] 2025-11-24 11:07:42,435 | INFO     | exitcode: 0
[2025-11-24 06:08:21] 2025-11-24 11:07:42,435 | INFO     | exitmsg: OK
[2025-11-24 06:08:21] 2025-11-24 11:07:42,435 | INFO     | cpuconsumptiontime: 546224 s
[2025-11-24 06:08:21] 2025-11-24 11:07:42,435 | INFO     | nevents: 1000
[2025-11-24 06:08:21] 2025-11-24 11:07:42,435 | INFO     | neventsw: 0
[2025-11-24 06:08:21] 2025-11-24 11:07:42,436 | INFO     | pid: 29759
[2025-11-24 06:08:21] 2025-11-24 11:07:42,436 | INFO     | pgrp: 29759
[2025-11-24 06:08:21] 2025-11-24 11:07:42,436 | INFO     | corecount: 8
[2025-11-24 06:08:21] 2025-11-24 11:07:42,436 | INFO     | event service: False
[2025-11-24 06:08:21] 2025-11-24 11:07:42,436 | INFO     | sizes: {0: 2298636, 1: 2298835, 4: 2299097, 12: 2299125, 70680: 2355868, 70681: 2355867, 70685: 2365045, 70686: 2365101, 70689: 2365347}
[2025-11-24 06:08:21] 2025-11-24 11:07:42,436 | INFO     | --------------------------------------------------
[2025-11-24 06:08:21] 2025-11-24 11:07:42,437 | INFO     | 
[2025-11-24 06:08:21] 2025-11-24 11:07:42,437 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 06:08:21] 2025-11-24 11:07:42,467 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,471 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 06:08:21] 2025-11-24 11:07:42,471 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,471 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 06:08:21] 2025-11-24 11:07:42,471 | INFO     | job 6895333835 has completed (purged errors)
[2025-11-24 06:08:21] 2025-11-24 11:07:42,471 | INFO     | overall cleanup function is called
[2025-11-24 06:08:21] 2025-11-24 11:07:43,486 | INFO     | --- collectZombieJob: --- 10, [29759]
[2025-11-24 06:08:21] 2025-11-24 11:07:43,487 | INFO     | zombie collector waiting for pid 29759
[2025-11-24 06:08:21] 2025-11-24 11:07:43,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 06:08:21] 2025-11-24 11:07:43,487 | INFO     | collected zombie processes
[2025-11-24 06:08:21] 2025-11-24 11:07:43,487 | INFO     | will attempt to kill all subprocesses of pid=29759
[2025-11-24 06:08:21] 2025-11-24 11:07:43,623 | INFO     | process IDs to be killed: [29759] (in reverse order)
[2025-11-24 06:08:21] 2025-11-24 11:07:43,681 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 06:08:21] 2025-11-24 11:07:43,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 06:08:21] 2025-11-24 11:07:43,686 | INFO     | did not find any defunct processes belonging to 29759
[2025-11-24 06:08:21] 2025-11-24 11:07:43,691 | INFO     | did not find any defunct processes belonging to 29759
[2025-11-24 06:08:21] 2025-11-24 11:07:43,693 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 06:08:21] 2025-11-24 11:07:43,694 | INFO     | ready for new job
[2025-11-24 06:08:21] 2025-11-24 11:07:43,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 06:08:21] 2025-11-24 11:07:43,698 | INFO     | ***************************************
[2025-11-24 06:08:21] 2025-11-24 11:07:43,698 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 06:08:21] 2025-11-24 11:07:43,698 | INFO     | ***************************************
[2025-11-24 06:08:21] 2025-11-24 11:07:43,698 | INFO     | 
[2025-11-24 06:08:21] 2025-11-24 11:07:43,699 | INFO     | architecture information:
[2025-11-24 06:08:21] 2025-11-24 11:07:43,699 | INFO     | executing command: cat /etc/os-release
[2025-11-24 06:08:21] 2025-11-24 11:07:43,709 | INFO     | cat /etc/os-release:
[2025-11-24 06:08:21] NAME="CentOS Linux"
[2025-11-24 06:08:21] VERSION="7 (Core)"
[2025-11-24 06:08:21] ID="centos"
[2025-11-24 06:08:21] ID_LIKE="rhel fedora"
[2025-11-24 06:08:21] VERSION_ID="7"
[2025-11-24 06:08:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 06:08:21] ANSI_COLOR="0;31"
[2025-11-24 06:08:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 06:08:21] HOME_URL="https://www.centos.org/"
[2025-11-24 06:08:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 06:08:21] 
[2025-11-24 06:08:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 06:08:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 06:08:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 06:08:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 06:08:21] 
[2025-11-24 06:08:21] 2025-11-24 11:07:43,709 | INFO     | ***************************************
[2025-11-24 06:08:21] 2025-11-24 11:07:44,215 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 06:08:21] 2025-11-24 11:07:44,235 | INFO     | sufficient remaining disk space (26173505536 B)
[2025-11-24 06:08:21] 2025-11-24 11:07:44,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 06:08:21] 2025-11-24 11:07:44,236 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 06:08:21] 2025-11-24 11:07:44,236 | INFO     | update_server=False
[2025-11-24 06:08:21] 2025-11-24 11:07:44,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 06:08:21] 2025-11-24 11:07:44,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:08:21] 2025-11-24 11:07:44,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:08:21] 2025-11-24 11:07:44,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 06:08:21] 2025-11-24 11:07:44,238 | INFO     | aborting loop
[2025-11-24 06:08:21] 2025-11-24 11:07:44,497 | INFO     | all data control threads have been joined
[2025-11-24 06:08:21] 2025-11-24 11:07:44,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 06:08:21] 2025-11-24 11:07:44,892 | INFO     | all job control threads have been joined
[2025-11-24 06:08:21] 2025-11-24 11:07:44,917 | INFO     | all payload control threads have been joined
[2025-11-24 06:08:21] 2025-11-24 11:07:45,242 | INFO     | [job] retrieve thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,243 | INFO     | [job] queue monitor thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,245 | INFO     | [job] job monitor thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,315 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,365 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,499 | INFO     | [data] control thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,550 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,741 | INFO     | [payload] validate_post thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,771 | INFO     | [job] validate thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,850 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,899 | INFO     | [job] control thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:45,923 | INFO     | [payload] control thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:46,001 | INFO     | [data] copytool_in thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:46,247 | INFO     | [data] copytool_out thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:46,715 | INFO     | [payload] failed_post thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:07:48,515 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 06:08:21] 2025-11-24 11:08:14,330 | INFO     | [monitor] cgroup control has ended
[2025-11-24 06:08:21] 2025-11-24 11:08:15,074 | INFO     | PID=23311 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 06:08:21] 2025-11-24 11:08:15,074 | INFO     | .. there are 3 such processes running
[2025-11-24 06:08:21] 2025-11-24 11:08:15,075 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 06:08:21] 2025-11-24 11:08:15,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 06:08:21] 2025-11-24 11:08:15,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 06:08:21] 2025-11-24 11:08:16,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971828844352)>', '<ExcThread(monitor, started 139971524531968)>']
[2025-11-24 06:08:21] 2025-11-24 11:08:17,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 06:08:21] 2025-11-24 11:08:17,087 | INFO     | [monitor] control thread has ended
[2025-11-24 06:08:21] 2025-11-24 11:08:21,230 | INFO     | all workflow threads have been joined
[2025-11-24 06:08:21] 2025-11-24 11:08:21,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 06:08:21] 2025-11-24 11:08:21,231 | INFO     | traces error code: 0
[2025-11-24 06:08:21] 2025-11-24 11:08:21,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 06:08:21] 2025-11-24 11:08:21,364 [wrapper] ==== pilot stdout END ====
[2025-11-24 06:08:21] 2025-11-24 11:08:21,367 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 06:08:21] 2025-11-24 11:08:21,369 [wrapper] pilotpid: 23311
[2025-11-24 06:08:21] 2025-11-24 11:08:21,371 [wrapper] Pilot exit status: 0
[2025-11-24 06:08:21] 2025-11-24 11:08:21,381 [wrapper] pandaids: 6895333835
[2025-11-24 06:08:21] 2025-11-24 11:08:21,407 [wrapper] cleanup supervisor_pilot  9217 23312
[2025-11-24 06:08:21] 2025-11-24 11:08:21,410 [wrapper] Test setup, not cleaning
[2025-11-24 06:08:21] 2025-11-24 11:08:21,412 [wrapper] apfmon messages muted
[2025-11-24 06:08:21] 2025-11-24 11:08:21,414 [wrapper] ==== wrapper stdout END ====
[2025-11-24 06:08:21] 2025-11-24 11:08:21,416 [wrapper] ==== wrapper stderr END ====
[2025-11-24 06:08:21]  *** Error codes and diagnostics ***
[2025-11-24 06:08:21]     "exeErrorCode": 0,
[2025-11-24 06:08:21]     "exeErrorDiag": "",
[2025-11-24 06:08:21]     "pilotErrorCode": 0,
[2025-11-24 06:08:21]     "pilotErrorDiag": "",
[2025-11-24 06:08:21]  *** Listing of results directory ***
[2025-11-24 06:08:21] total 1326416
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 20:38 pilot3.tar.gz
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 21:01 queuedata.json
[2025-11-24 06:08:21] -rwx------ 1 boincer umatlas     36292 Nov 21 21:04 runpilot2-wrapper.sh
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas       100 Nov 23 10:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 06:08:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 10:29 run_atlas
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas       105 Nov 23 10:29 job.xml
[2025-11-24 06:08:21] -rw-r--r-- 2 boincer umatlas 408666363 Nov 23 10:29 EVNT.47483658._000212.pool.root.1
[2025-11-24 06:08:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 10:29 start_atlas.sh
[2025-11-24 06:08:21] drwxrwx--x 2 boincer umatlas      4096 Nov 23 10:29 shared
[2025-11-24 06:08:21] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 10:29 input.tar.gz
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas         0 Nov 23 10:29 boinc_lockfile
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 10:29 pandaJob.out
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas        57 Nov 23 10:29 setup.sh.local
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas    989785 Nov 23 10:29 agis_schedconf.cvmfs.json
[2025-11-24 06:08:21] drwx------ 5 boincer umatlas      4096 Nov 23 10:29 pilot3
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas       533 Nov 24 05:57 boinc_task_state.xml
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas      5954 Nov 24 06:00 init_data.xml
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas 921490839 Nov 24 06:06 HITS.47556137._002084.pool.root.1
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas      1066 Nov 24 06:07 memory_monitor_summary.json
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas   1526164 Nov 24 06:07 agis_ddmendpoints.agis.ALL.json
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas   2313938 Nov 24 06:07 log.47556137._002084.job.log.tgz.1
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas        95 Nov 24 06:07 pilot_heartbeat.json
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas      8667 Nov 24 06:07 heartbeat.json
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 06:08 boinc_mmap_file
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas        29 Nov 24 06:08 wrapper_checkpoint.txt
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas      4821 Nov 24 06:08 pilotlog.txt
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas   9769969 Nov 24 06:08 log.47556137._002084.job.log.1
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas       353 Nov 24 06:08 output.list
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas       620 Nov 24 06:08 runtime_log
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas  12103680 Nov 24 06:08 result.tar.gz
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 06:08 runtime_log.err
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas       668 Nov 24 06:08 Nf3KDm39rg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhrJKDmoCltsn.diag
[2025-11-24 06:08:21] -rw-r--r-- 1 boincer umatlas     21327 Nov 24 06:08 stderr.txt
[2025-11-24 06:08:21] HITS file was successfully produced:
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas 921490839 Nov 24 06:06 shared/HITS.pool.root.1
[2025-11-24 06:08:21]  *** Contents of shared directory: ***
[2025-11-24 06:08:21] total 1311408
[2025-11-24 06:08:21] -rw-r--r-- 2 boincer umatlas 408666363 Nov 23 10:29 ATLAS.root_0
[2025-11-24 06:08:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 10:29 start_atlas.sh
[2025-11-24 06:08:21] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 10:29 input.tar.gz
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas 921490839 Nov 24 06:06 HITS.pool.root.1
[2025-11-24 06:08:21] -rw------- 1 boincer umatlas  12103680 Nov 24 06:08 result.tar.gz
06:08:23 (19590): run_atlas exited; CPU time 544909.853871
06:08:23 (19590): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN