Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:29:10 (22205): wrapper (7.7.26015): starting
10:29:10 (22205): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 10:29:10] Arguments: --nthreads 12
[2025-11-23 10:29:10] Threads: 12
[2025-11-23 10:29:10] Checking for CVMFS
[2025-11-23 10:29:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:29:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:29:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:29:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:29:11] 2.11.2.0 2987 283496 96736 153213 3 82 12660616 20275201 1 130560 1 127317792 99.967 16907098 13997 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 10:29:11] CVMFS is ok
[2025-11-23 10:29:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:29:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:29:11] Further information can be found at the LHC@home message board.
[2025-11-23 10:29:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:29:11] Checking for apptainer binary...
[2025-11-23 10:29:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:29:11] Running /usr/bin/apptainer --version
[2025-11-23 10:29:11] apptainer version 1.3.2-1.el7
[2025-11-23 10:29:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:29:12] c-205-19.aglt2.org
[2025-11-23 10:29:12] apptainer works
[2025-11-23 10:29:12] Set ATHENA_PROC_NUMBER=12
[2025-11-23 10:29:12] Set ATHENA_CORE_NUMBER=12
[2025-11-23 10:29:12] Starting ATLAS job with PandaID=6895346077
[2025-11-23 10:29:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:36:31]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:36:31] 2025-11-23 22:35:57,971 | INFO     | monitor loop #1915: job 0:6895346077 is in state 'finished'
[2025-11-23 17:36:31] 2025-11-23 22:35:57,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,556 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 17:36:31] 2025-11-23 22:35:58,560 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-11-23 17:36:31] 2025-11-23 22:35:58,562 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895346077/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,563 | INFO     | extracted standard info from prmon json
[2025-11-23 17:36:31] 2025-11-23 22:35:58,563 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:36:31] 2025-11-23 22:35:58,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:36:31] 2025-11-23 22:35:58,571 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:36:31] 2025-11-23 22:35:58,572 | INFO     | sum of square deviations: 22809546598.057354
[2025-11-23 17:36:31] 2025-11-23 22:35:58,575 | INFO     | sum of deviations: 302973490024.7038
[2025-11-23 17:36:31] 2025-11-23 22:35:58,576 | INFO     | mean x: 1763924545.2887828
[2025-11-23 17:36:31] 2025-11-23 22:35:58,576 | INFO     | mean y: 3434749.3412887827
[2025-11-23 17:36:31] 2025-11-23 22:35:58,576 | INFO     | intersect: -23426332840.685993
[2025-11-23 17:36:31] 2025-11-23 22:35:58,576 | INFO     | chi2: 5.333431900701859
[2025-11-23 17:36:31] 2025-11-23 22:35:58,577 | INFO     | sum of square deviations: 22002712560.135273
[2025-11-23 17:36:31] 2025-11-23 22:35:58,581 | INFO     | sum of deviations: 445227483236.9758
[2025-11-23 17:36:31] 2025-11-23 22:35:58,581 | INFO     | mean x: 1763924392.7922704
[2025-11-23 17:36:31] 2025-11-23 22:35:58,582 | INFO     | mean y: 3461606.9299516906
[2025-11-23 17:36:31] 2025-11-23 22:35:58,582 | INFO     | intersect: -35689756485.01175
[2025-11-23 17:36:31] 2025-11-23 22:35:58,582 | INFO     | chi2: 2.9596742950270345
[2025-11-23 17:36:31] 2025-11-23 22:35:58,582 | INFO     | current chi2=2.9596742950270345 (change=44.50713255310239 %)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,583 | INFO     | sum of square deviations: 21215134697.20279
[2025-11-23 17:36:31] 2025-11-23 22:35:58,587 | INFO     | sum of deviations: 504891364397.8094
[2025-11-23 17:36:31] 2025-11-23 22:35:58,587 | INFO     | mean x: 1763924240.2958436
[2025-11-23 17:36:31] 2025-11-23 22:35:58,587 | INFO     | mean y: 3473114.770171149
[2025-11-23 17:36:31] 2025-11-23 22:35:58,587 | INFO     | intersect: -41975525797.490425
[2025-11-23 17:36:31] 2025-11-23 22:35:58,587 | INFO     | chi2: 2.33598453616999
[2025-11-23 17:36:31] 2025-11-23 22:35:58,588 | INFO     | current chi2=2.33598453616999 (change=21.072918729773523 %)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,588 | INFO     | right removable region: 408
[2025-11-23 17:36:31] 2025-11-23 22:35:58,588 | INFO     | sum of square deviations: 22002638750.135277
[2025-11-23 17:36:31] 2025-11-23 22:35:58,592 | INFO     | sum of deviations: 173824481936.0286
[2025-11-23 17:36:31] 2025-11-23 22:35:58,592 | INFO     | mean x: 1763924697.7922704
[2025-11-23 17:36:31] 2025-11-23 22:35:58,592 | INFO     | mean y: 3459068.384057971
[2025-11-23 17:36:31] 2025-11-23 22:35:58,592 | INFO     | intersect: -13931837522.622423
[2025-11-23 17:36:31] 2025-11-23 22:35:58,593 | INFO     | chi2: 3.1243396480556447
[2025-11-23 17:36:31] 2025-11-23 22:35:58,593 | INFO     | current chi2=3.1243396480556447 (change=41.41971424357188 %)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,593 | INFO     | sum of square deviations: 21214987077.202797
[2025-11-23 17:36:31] 2025-11-23 22:35:58,597 | INFO     | sum of deviations: 142691826886.74335
[2025-11-23 17:36:31] 2025-11-23 22:35:58,597 | INFO     | mean x: 1763924850.2958436
[2025-11-23 17:36:31] 2025-11-23 22:35:58,597 | INFO     | mean y: 3465089.6136919316
[2025-11-23 17:36:31] 2025-11-23 22:35:58,597 | INFO     | intersect: -11860678803.743118
[2025-11-23 17:36:31] 2025-11-23 22:35:58,598 | INFO     | chi2: 3.0657820312920467
[2025-11-23 17:36:31] 2025-11-23 22:35:58,598 | INFO     | current chi2=3.0657820312920467 (change=1.874239786959136 %)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,598 | INFO     | left removable region: 20
[2025-11-23 17:36:31] 2025-11-23 22:35:58,598 | INFO     | sum of square deviations: 18112017663.8866
[2025-11-23 17:36:31] 2025-11-23 22:35:58,602 | INFO     | sum of deviations: 307215939875.7167
[2025-11-23 17:36:31] 2025-11-23 22:35:58,602 | INFO     | mean x: 1763924819.8092782
[2025-11-23 17:36:31] 2025-11-23 22:35:58,602 | INFO     | mean y: 3512070.0231958763
[2025-11-23 17:36:31] 2025-11-23 22:35:58,602 | INFO     | intersect: -29916170620.454357
[2025-11-23 17:36:31] 2025-11-23 22:35:58,603 | INFO     | chi2: 0.030366287820874856
[2025-11-23 17:36:31] 2025-11-23 22:35:58,603 | INFO     | current memory leak: 16.96 B/s (using 388 data points, chi2=0.03)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,603 | INFO     | could have reported an average CPU frequency of 2357 MHz (18 samples)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,603 | INFO     | ..............................
[2025-11-23 17:36:31] 2025-11-23 22:35:58,604 | INFO     | . Timing measurements:
[2025-11-23 17:36:31] 2025-11-23 22:35:58,604 | INFO     | . get job = 0 s
[2025-11-23 17:36:31] 2025-11-23 22:35:58,604 | INFO     | . initial setup = 2 s
[2025-11-23 17:36:31] 2025-11-23 22:35:58,604 | INFO     | . payload setup = 7 s
[2025-11-23 17:36:31] 2025-11-23 22:35:58,604 | INFO     | . stage-in = 0 s
[2025-11-23 17:36:31] 2025-11-23 22:35:58,604 | INFO     | . payload execution = 25554 s
[2025-11-23 17:36:31] 2025-11-23 22:35:58,604 | INFO     | . stage-out = 3 s
[2025-11-23 17:36:31] 2025-11-23 22:35:58,604 | INFO     | . log creation = 0 s
[2025-11-23 17:36:31] 2025-11-23 22:35:58,604 | INFO     | ..............................
[2025-11-23 17:36:31] 2025-11-23 22:35:58,684 | INFO     | 
[2025-11-23 17:36:31] 2025-11-23 22:35:58,685 | INFO     | job summary report
[2025-11-23 17:36:31] 2025-11-23 22:35:58,685 | INFO     | --------------------------------------------------
[2025-11-23 17:36:31] 2025-11-23 22:35:58,685 | INFO     | PanDA job id: 6895346077
[2025-11-23 17:36:31] 2025-11-23 22:35:58,685 | INFO     | task id: 47556137
[2025-11-23 17:36:31] 2025-11-23 22:35:58,685 | INFO     | errors: (none)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:36:31] 2025-11-23 22:35:58,686 | INFO     | pilot state: finished 
[2025-11-23 17:36:31] 2025-11-23 22:35:58,686 | INFO     | transexitcode: 0
[2025-11-23 17:36:31] 2025-11-23 22:35:58,686 | INFO     | exeerrorcode: 0
[2025-11-23 17:36:31] 2025-11-23 22:35:58,686 | INFO     | exeerrordiag: 
[2025-11-23 17:36:31] 2025-11-23 22:35:58,686 | INFO     | exitcode: 0
[2025-11-23 17:36:31] 2025-11-23 22:35:58,686 | INFO     | exitmsg: OK
[2025-11-23 17:36:31] 2025-11-23 22:35:58,686 | INFO     | cpuconsumptiontime: 292823 s
[2025-11-23 17:36:31] 2025-11-23 22:35:58,686 | INFO     | nevents: 1000
[2025-11-23 17:36:31] 2025-11-23 22:35:58,687 | INFO     | neventsw: 0
[2025-11-23 17:36:31] 2025-11-23 22:35:58,687 | INFO     | pid: 319
[2025-11-23 17:36:31] 2025-11-23 22:35:58,687 | INFO     | pgrp: 319
[2025-11-23 17:36:31] 2025-11-23 22:35:58,687 | INFO     | corecount: 12
[2025-11-23 17:36:31] 2025-11-23 22:35:58,687 | INFO     | event service: False
[2025-11-23 17:36:31] 2025-11-23 22:35:58,687 | INFO     | sizes: {0: 2298750, 5: 2299012, 11: 2299068, 25564: 2336245, 25565: 2336244, 25569: 2345478, 25575: 2345668}
[2025-11-23 17:36:31] 2025-11-23 22:35:58,687 | INFO     | --------------------------------------------------
[2025-11-23 17:36:31] 2025-11-23 22:35:58,687 | INFO     | 
[2025-11-23 17:36:31] 2025-11-23 22:35:58,687 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 17:36:31] 2025-11-23 22:35:58,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,714 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,715 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,716 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,716 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,716 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:36:31] 2025-11-23 22:35:58,717 | INFO     | job 6895346077 has completed (purged errors)
[2025-11-23 17:36:31] 2025-11-23 22:35:58,717 | INFO     | overall cleanup function is called
[2025-11-23 17:36:31] 2025-11-23 22:35:59,733 | INFO     | --- collectZombieJob: --- 10, [319]
[2025-11-23 17:36:31] 2025-11-23 22:35:59,733 | INFO     | zombie collector waiting for pid 319
[2025-11-23 17:36:31] 2025-11-23 22:35:59,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:36:31] 2025-11-23 22:35:59,733 | INFO     | collected zombie processes
[2025-11-23 17:36:31] 2025-11-23 22:35:59,733 | INFO     | will attempt to kill all subprocesses of pid=319
[2025-11-23 17:36:31] 2025-11-23 22:35:59,827 | INFO     | process IDs to be killed: [319] (in reverse order)
[2025-11-23 17:36:31] 2025-11-23 22:35:59,878 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:36:31] 2025-11-23 22:35:59,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:36:31] 2025-11-23 22:35:59,882 | INFO     | did not find any defunct processes belonging to 319
[2025-11-23 17:36:31] 2025-11-23 22:35:59,886 | INFO     | did not find any defunct processes belonging to 319
[2025-11-23 17:36:31] 2025-11-23 22:35:59,888 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:36:31] 2025-11-23 22:35:59,888 | INFO     | ready for new job
[2025-11-23 17:36:31] 2025-11-23 22:35:59,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:36:31] 2025-11-23 22:35:59,890 | INFO     | ***************************************
[2025-11-23 17:36:31] 2025-11-23 22:35:59,890 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:36:31] 2025-11-23 22:35:59,891 | INFO     | ***************************************
[2025-11-23 17:36:31] 2025-11-23 22:35:59,891 | INFO     | 
[2025-11-23 17:36:31] 2025-11-23 22:35:59,891 | INFO     | architecture information:
[2025-11-23 17:36:31] 2025-11-23 22:35:59,892 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:36:31] 2025-11-23 22:35:59,907 | INFO     | cat /etc/os-release:
[2025-11-23 17:36:31] NAME="CentOS Linux"
[2025-11-23 17:36:31] VERSION="7 (Core)"
[2025-11-23 17:36:31] ID="centos"
[2025-11-23 17:36:31] ID_LIKE="rhel fedora"
[2025-11-23 17:36:31] VERSION_ID="7"
[2025-11-23 17:36:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:36:31] ANSI_COLOR="0;31"
[2025-11-23 17:36:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:36:31] HOME_URL="https://www.centos.org/"
[2025-11-23 17:36:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:36:31] 
[2025-11-23 17:36:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:36:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:36:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:36:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:36:31] 
[2025-11-23 17:36:31] 2025-11-23 22:35:59,907 | INFO     | ***************************************
[2025-11-23 17:36:31] 2025-11-23 22:36:00,410 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 17:36:31] 2025-11-23 22:36:00,426 | INFO     | sufficient remaining disk space (28254928896 B)
[2025-11-23 17:36:31] 2025-11-23 22:36:00,427 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:36:31] 2025-11-23 22:36:00,427 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:36:31] 2025-11-23 22:36:00,427 | INFO     | update_server=False
[2025-11-23 17:36:31] 2025-11-23 22:36:00,427 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:36:31] 2025-11-23 22:36:00,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:36:31] 2025-11-23 22:36:00,474 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 17:36:31] 2025-11-23 22:36:00,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 17:36:31] 2025-11-23 22:36:00,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:36:31] 2025-11-23 22:36:00,475 | INFO     | will abort loop
[2025-11-23 17:36:31] 2025-11-23 22:36:00,591 | INFO     | all payload control threads have been joined
[2025-11-23 17:36:31] 2025-11-23 22:36:00,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:36:31] 2025-11-23 22:36:01,114 | INFO     | all job control threads have been joined
[2025-11-23 17:36:31] 2025-11-23 22:36:01,412 | INFO     | all data control threads have been joined
[2025-11-23 17:36:31] 2025-11-23 22:36:01,433 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:01,433 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:01,445 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:01,480 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:01,594 | INFO     | [payload] control thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:01,641 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:01,922 | INFO     | [job] validate thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:02,116 | INFO     | [job] control thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:02,259 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:02,275 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:02,413 | INFO     | [data] control thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:02,500 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:02,695 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:02,771 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:02,890 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:03,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:36:31] 2025-11-23 22:36:07,789 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:36:31] 2025-11-23 22:36:08,966 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:36:31] 2025-11-23 22:36:09,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139666139588416)>', '<ExcThread(monitor, started 139665474574080)>']
[2025-11-23 17:36:31] 2025-11-23 22:36:14,096 | INFO     | all workflow threads have been joined
[2025-11-23 17:36:31] 2025-11-23 22:36:14,096 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:36:31] 2025-11-23 22:36:14,096 | INFO     | traces error code: 0
[2025-11-23 17:36:31] 2025-11-23 22:36:14,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:36:31] 2025-11-23 22:36:30,784 | INFO     | PID=26388 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 17:36:31] 2025-11-23 22:36:30,785 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:36:31] 2025-11-23 22:36:30,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:36:31] 2025-11-23 22:36:30,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:36:31] 2025-11-23 22:36:30,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:36:31] 2025-11-23 22:36:30,785 | INFO     | [monitor] control thread has ended
[2025-11-23 17:36:31] 2025-11-23 22:36:30,875 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:36:31] 2025-11-23 22:36:30,878 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:36:31] 2025-11-23 22:36:30,882 [wrapper] pilotpid: 26388
[2025-11-23 17:36:31] 2025-11-23 22:36:30,885 [wrapper] Pilot exit status: 0
[2025-11-23 17:36:31] 2025-11-23 22:36:30,898 [wrapper] pandaids: 6895346077
[2025-11-23 17:36:31] 2025-11-23 22:36:30,938 [wrapper] cleanup supervisor_pilot  8522 26389
[2025-11-23 17:36:31] 2025-11-23 22:36:30,942 [wrapper] Test setup, not cleaning
[2025-11-23 17:36:31] 2025-11-23 22:36:30,946 [wrapper] apfmon messages muted
[2025-11-23 17:36:31] 2025-11-23 22:36:30,950 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:36:31] 2025-11-23 22:36:30,953 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:36:31]  *** Error codes and diagnostics ***
[2025-11-23 17:36:31]     "exeErrorCode": 0,
[2025-11-23 17:36:31]     "exeErrorDiag": "",
[2025-11-23 17:36:31]     "pilotErrorCode": 0,
[2025-11-23 17:36:31]     "pilotErrorDiag": "",
[2025-11-23 17:36:31]  *** Listing of results directory ***
[2025-11-23 17:36:31] total 1305012
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 12:43 pilot3.tar.gz
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 12:44 queuedata.json
[2025-11-23 17:36:31] -rwx------ 1 boincer umatlas     36292 Nov 22 12:46 runpilot2-wrapper.sh
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas       100 Nov 23 10:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:36:31] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 10:29 run_atlas
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas       105 Nov 23 10:29 job.xml
[2025-11-23 17:36:31] -rw-r--r-- 2 boincer umatlas 410614716 Nov 23 10:29 EVNT.47483658._000454.pool.root.1
[2025-11-23 17:36:31] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 10:29 start_atlas.sh
[2025-11-23 17:36:31] drwxrwx--x 2 boincer umatlas      4096 Nov 23 10:29 shared
[2025-11-23 17:36:31] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 10:29 input.tar.gz
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas         0 Nov 23 10:29 boinc_lockfile
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas      2782 Nov 23 10:29 pandaJob.out
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas        57 Nov 23 10:29 setup.sh.local
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas    989785 Nov 23 10:29 agis_schedconf.cvmfs.json
[2025-11-23 17:36:31] drwx------ 5 boincer umatlas      4096 Nov 23 10:29 pilot3
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas       532 Nov 23 17:26 boinc_task_state.xml
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas      5955 Nov 23 17:27 init_data.xml
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas 910308467 Nov 23 17:35 HITS.47556137._004491.pool.root.1
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas        95 Nov 23 17:35 pilot_heartbeat.json
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas      1063 Nov 23 17:35 memory_monitor_summary.json
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas   1526164 Nov 23 17:35 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas   2167206 Nov 23 17:35 log.47556137._004491.job.log.tgz.1
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas      8655 Nov 23 17:35 heartbeat.json
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 17:36 boinc_mmap_file
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas        29 Nov 23 17:36 wrapper_checkpoint.txt
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas       745 Nov 23 17:36 pilotlog.txt
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas   3573319 Nov 23 17:36 log.47556137._004491.job.log.1
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas       353 Nov 23 17:36 output.list
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas       620 Nov 23 17:36 runtime_log
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas   5765120 Nov 23 17:36 result.tar.gz
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 17:36 runtime_log.err
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas       670 Nov 23 17:36 r4RKDmnr6g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQDIKDmNFVk6n.diag
[2025-11-23 17:36:31] -rw-r--r-- 1 boincer umatlas     21300 Nov 23 17:36 stderr.txt
[2025-11-23 17:36:31] HITS file was successfully produced:
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas 910308467 Nov 23 17:35 shared/HITS.pool.root.1
[2025-11-23 17:36:31]  *** Contents of shared directory: ***
[2025-11-23 17:36:31] total 1296200
[2025-11-23 17:36:31] -rw-r--r-- 2 boincer umatlas 410614716 Nov 23 10:29 ATLAS.root_0
[2025-11-23 17:36:31] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 10:29 start_atlas.sh
[2025-11-23 17:36:31] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 10:29 input.tar.gz
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas 910308467 Nov 23 17:35 HITS.pool.root.1
[2025-11-23 17:36:31] -rw------- 1 boincer umatlas   5765120 Nov 23 17:36 result.tar.gz
17:36:32 (22205): run_atlas exited; CPU time 286218.866198
17:36:32 (22205): called boinc_finish(0)

</stderr_txt>
]]>

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