Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
14:26:36 (444024): wrapper (7.7.26015): starting
14:26:36 (444024): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 14:26:36] Arguments: --nthreads 4
[2025-11-25 14:26:36] Threads: 4
[2025-11-25 14:26:36] Checking for CVMFS
[2025-11-25 14:26:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:26:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:26:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:26:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:26:37] 2.11.3.0 33379 3153 68820 153296 1 81 3849874 4194304 0 130560 0 967987 99.479 408135 479 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2025-11-25 14:26:37] CVMFS is ok
[2025-11-25 14:26:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:26:37] Checking for apptainer binary...
[2025-11-25 14:26:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:26:37] Running /usr/bin/apptainer --version
[2025-11-25 14:26:37] apptainer version 1.4.4-1.fc42
[2025-11-25 14:26:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:26:37] R7OwensSE
[2025-11-25 14:26:37] apptainer works
[2025-11-25 14:26:37] Set ATHENA_PROC_NUMBER=4
[2025-11-25 14:26:37] Set ATHENA_CORE_NUMBER=4
[2025-11-25 14:26:37] Starting ATLAS job with PandaID=6895345556
[2025-11-25 14:26:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 04:03:15]  *** The last 200 lines of the pilot log: ***
[2025-11-26 04:03:15] 2025-11-26 10:02:41,320 | INFO     | time since job start (48953s) is within the limit (172800.0s)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,150 | INFO     | monitor loop #3682: job 0:6895345556 is in state 'finished'
[2025-11-26 04:03:15] 2025-11-26 10:02:43,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,210 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 04:03:15] 2025-11-26 10:02:43,213 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3384.3286875000003
[2025-11-26 04:03:15] 2025-11-26 10:02:43,216 | INFO     | using path: /data/boinc/slots/7/PanDA_Pilot-6895345556/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,216 | INFO     | extracted standard info from prmon json
[2025-11-26 04:03:15] 2025-11-26 10:02:43,216 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 04:03:15] 2025-11-26 10:02:43,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 04:03:15] 2025-11-26 10:02:43,226 | INFO     | fitting pss+swap vs Time
[2025-11-26 04:03:15] 2025-11-26 10:02:43,227 | INFO     | sum of square deviations: 159956117260.5
[2025-11-26 04:03:15] 2025-11-26 10:02:43,239 | INFO     | sum of deviations: 461165036098.99994
[2025-11-26 04:03:15] 2025-11-26 10:02:43,239 | INFO     | mean x: 1764126863.5
[2025-11-26 04:03:15] 2025-11-26 10:02:43,239 | INFO     | mean y: 2305379.825436409
[2025-11-26 04:03:15] 2025-11-26 10:02:43,239 | INFO     | intersect: -5083799750.897777
[2025-11-26 04:03:15] 2025-11-26 10:02:43,240 | INFO     | chi2: 3.2187615004690713
[2025-11-26 04:03:15] 2025-11-26 10:02:43,241 | INFO     | sum of square deviations: 156983028958.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,252 | INFO     | sum of deviations: 595899270256.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,252 | INFO     | mean x: 1764126711.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,252 | INFO     | mean y: 2312281.4391468004
[2025-11-26 04:03:15] 2025-11-26 10:02:43,252 | INFO     | intersect: -6694219354.507767
[2025-11-26 04:03:15] 2025-11-26 10:02:43,253 | INFO     | chi2: 1.6581602497404404
[2025-11-26 04:03:15] 2025-11-26 10:02:43,253 | INFO     | current chi2=1.6581602497404404 (change=48.4845258184306 %)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,254 | INFO     | sum of square deviations: 154047011118.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,265 | INFO     | sum of deviations: 593999373283.9999
[2025-11-26 04:03:15] 2025-11-26 10:02:43,265 | INFO     | mean x: 1764126558.5
[2025-11-26 04:03:15] 2025-11-26 10:02:43,265 | INFO     | mean y: 2312181.696969697
[2025-11-26 04:03:15] 2025-11-26 10:02:43,265 | INFO     | intersect: -6800092243.663649
[2025-11-26 04:03:15] 2025-11-26 10:02:43,266 | INFO     | chi2: 1.6502055455213536
[2025-11-26 04:03:15] 2025-11-26 10:02:43,266 | INFO     | current chi2=1.6502055455213536 (change=0.47973072689036095 %)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,266 | INFO     | right removable region: 791
[2025-11-26 04:03:15] 2025-11-26 10:02:43,267 | INFO     | sum of square deviations: 156983028958.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,278 | INFO     | sum of deviations: 338240823025.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,278 | INFO     | mean x: 1764127016.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,278 | INFO     | mean y: 2311667.56587202
[2025-11-26 04:03:15] 2025-11-26 10:02:43,279 | INFO     | intersect: -3798734711.607518
[2025-11-26 04:03:15] 2025-11-26 10:02:43,279 | INFO     | chi2: 1.679167012225855
[2025-11-26 04:03:15] 2025-11-26 10:02:43,279 | INFO     | current chi2=1.679167012225855 (change=47.83189086916973 %)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,280 | INFO     | sum of square deviations: 154047011118.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,291 | INFO     | sum of deviations: 331000294892.49994
[2025-11-26 04:03:15] 2025-11-26 10:02:43,291 | INFO     | mean x: 1764127168.5
[2025-11-26 04:03:15] 2025-11-26 10:02:43,291 | INFO     | mean y: 2312043.117424242
[2025-11-26 04:03:15] 2025-11-26 10:02:43,292 | INFO     | intersect: -3788262072.9495425
[2025-11-26 04:03:15] 2025-11-26 10:02:43,292 | INFO     | chi2: 1.6786296814009447
[2025-11-26 04:03:15] 2025-11-26 10:02:43,292 | INFO     | current chi2=1.6786296814009447 (change=0.03199984402969509 %)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,292 | INFO     | left removable region: 20
[2025-11-26 04:03:15] 2025-11-26 10:02:43,293 | INFO     | sum of square deviations: 142115297170.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,304 | INFO     | sum of deviations: 428690102966.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,304 | INFO     | mean x: 1764127138.0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,304 | INFO     | mean y: 2320817.9546044096
[2025-11-26 04:03:15] 2025-11-26 10:02:43,304 | INFO     | intersect: -5319160116.850628
[2025-11-26 04:03:15] 2025-11-26 10:02:43,305 | INFO     | chi2: 0.07861759173100906
[2025-11-26 04:03:15] 2025-11-26 10:02:43,305 | INFO     | current memory leak: 3.02 B/s (using 771 data points, chi2=0.08)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | could have reported an average CPU frequency of 3455 MHz (31 samples)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | ..............................
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | . Timing measurements:
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | . get job = 0 s
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | . initial setup = 2 s
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | . payload setup = 6 s
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | . stage-in = 0 s
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | . payload execution = 48917 s
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | . stage-out = 3 s
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | . log creation = 0 s
[2025-11-26 04:03:15] 2025-11-26 10:02:43,306 | INFO     | ..............................
[2025-11-26 04:03:15] 2025-11-26 10:02:43,329 | INFO     | time since job start (48955s) is within the limit (172800.0s)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | 
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | job summary report
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | --------------------------------------------------
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | PanDA job id: 6895345556
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | task id: 47556149
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | errors: (none)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | pilot state: finished 
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | transexitcode: 0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | exeerrorcode: 0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | exeerrordiag: 
[2025-11-26 04:03:15] 2025-11-26 10:02:43,383 | INFO     | exitcode: 0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | exitmsg: OK
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | cpuconsumptiontime: 193298 s
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | nevents: 1000
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | neventsw: 0
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | pid: 454389
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | pgrp: 454389
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | corecount: 4
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | event service: False
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | sizes: {0: 2284308, 4: 2284570, 11: 2284598, 48927: 2333132, 48931: 2342120, 48934: 2342176, 48939: 2342328}
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | --------------------------------------------------
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | 
[2025-11-26 04:03:15] 2025-11-26 10:02:43,384 | INFO     | executing command: ls -lF /data/boinc/slots/7
[2025-11-26 04:03:15] 2025-11-26 10:02:43,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,409 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,409 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 04:03:15] 2025-11-26 10:02:43,409 | INFO     | job 6895345556 has completed (purged errors)
[2025-11-26 04:03:15] 2025-11-26 10:02:43,409 | INFO     | overall cleanup function is called
[2025-11-26 04:03:15] 2025-11-26 10:02:44,422 | INFO     | --- collectZombieJob: --- 10, [454389]
[2025-11-26 04:03:15] 2025-11-26 10:02:44,422 | INFO     | zombie collector waiting for pid 454389
[2025-11-26 04:03:15] 2025-11-26 10:02:44,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 04:03:15] 2025-11-26 10:02:44,423 | INFO     | collected zombie processes
[2025-11-26 04:03:15] 2025-11-26 10:02:44,423 | INFO     | will attempt to kill all subprocesses of pid=454389
[2025-11-26 04:03:15] 2025-11-26 10:02:44,514 | INFO     | process IDs to be killed: [454389] (in reverse order)
[2025-11-26 04:03:15] 2025-11-26 10:02:44,555 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 04:03:15] 2025-11-26 10:02:44,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 04:03:15] 2025-11-26 10:02:44,559 | INFO     | did not find any defunct processes belonging to 454389
[2025-11-26 04:03:15] 2025-11-26 10:02:44,561 | INFO     | did not find any defunct processes belonging to 454389
[2025-11-26 04:03:15] 2025-11-26 10:02:44,564 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 04:03:15] 2025-11-26 10:02:44,564 | INFO     | ready for new job
[2025-11-26 04:03:15] 2025-11-26 10:02:44,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 04:03:15] 2025-11-26 10:02:44,568 | INFO     | ***************************************
[2025-11-26 04:03:15] 2025-11-26 10:02:44,568 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 04:03:15] 2025-11-26 10:02:44,568 | INFO     | ***************************************
[2025-11-26 04:03:15] 2025-11-26 10:02:44,568 | INFO     | 
[2025-11-26 04:03:15] 2025-11-26 10:02:44,569 | INFO     | architecture information:
[2025-11-26 04:03:15] 2025-11-26 10:02:44,569 | INFO     | executing command: cat /etc/os-release
[2025-11-26 04:03:15] 2025-11-26 10:02:44,584 | INFO     | cat /etc/os-release:
[2025-11-26 04:03:15] NAME="CentOS Linux"
[2025-11-26 04:03:15] VERSION="7 (Core)"
[2025-11-26 04:03:15] ID="centos"
[2025-11-26 04:03:15] ID_LIKE="rhel fedora"
[2025-11-26 04:03:15] VERSION_ID="7"
[2025-11-26 04:03:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 04:03:15] ANSI_COLOR="0;31"
[2025-11-26 04:03:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 04:03:15] HOME_URL="https://www.centos.org/"
[2025-11-26 04:03:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 04:03:15] 
[2025-11-26 04:03:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 04:03:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 04:03:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 04:03:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 04:03:15] 
[2025-11-26 04:03:15] 2025-11-26 10:02:44,584 | INFO     | ***************************************
[2025-11-26 04:03:15] 2025-11-26 10:02:45,087 | INFO     | executing command: df -mP /data/boinc/slots/7
[2025-11-26 04:03:15] 2025-11-26 10:02:45,103 | INFO     | sufficient remaining disk space (404651769856 B)
[2025-11-26 04:03:15] 2025-11-26 10:02:45,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 04:03:15] 2025-11-26 10:02:45,104 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 04:03:15] 2025-11-26 10:02:45,104 | INFO     | update_server=False
[2025-11-26 04:03:15] 2025-11-26 10:02:45,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 04:03:15] 2025-11-26 10:02:45,104 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 04:03:15] 2025-11-26 10:02:45,104 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 04:03:15] 2025-11-26 10:02:45,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 04:03:15] 2025-11-26 10:02:45,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 04:03:15] 2025-11-26 10:02:45,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:03:15] 2025-11-26 10:02:45,105 | INFO     | aborting loop
[2025-11-26 04:03:15] 2025-11-26 10:02:45,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:03:15] 2025-11-26 10:02:45,152 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 04:03:15] 2025-11-26 10:02:45,292 | INFO     | all job control threads have been joined
[2025-11-26 04:03:15] 2025-11-26 10:02:45,701 | INFO     | all payload control threads have been joined
[2025-11-26 04:03:15] 2025-11-26 10:02:46,070 | INFO     | all data control threads have been joined
[2025-11-26 04:03:15] 2025-11-26 10:02:46,108 | INFO     | [job] retrieve thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:46,109 | INFO     | [job] job monitor thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:46,110 | INFO     | [job] queue monitor thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:46,264 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:46,281 | INFO     | [payload] validate_post thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:46,297 | INFO     | [job] control thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:46,408 | INFO     | [payload] failed_post thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:46,558 | INFO     | [data] copytool_in thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:46,707 | INFO     | [payload] control thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:46,811 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:47,029 | INFO     | [job] validate thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:47,030 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:47,072 | INFO     | [data] control thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:47,157 | INFO     | [data] copytool_out thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:47,531 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:02:48,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 04:03:15] 2025-11-26 10:02:52,154 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 04:03:15] 2025-11-26 10:03:08,910 | INFO     | [monitor] cgroup control has ended
[2025-11-26 04:03:15] 2025-11-26 10:03:09,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697008297792)>', '<ExcThread(monitor, started 140696518375168)>']
[2025-11-26 04:03:15] 2025-11-26 10:03:10,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 04:03:15] 2025-11-26 10:03:10,219 | INFO     | [monitor] control thread has ended
[2025-11-26 04:03:15] 2025-11-26 10:03:14,940 | INFO     | all workflow threads have been joined
[2025-11-26 04:03:15] 2025-11-26 10:03:14,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 04:03:15] 2025-11-26 10:03:14,941 | INFO     | traces error code: 0
[2025-11-26 04:03:15] 2025-11-26 10:03:14,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 04:03:15] 2025-11-26 10:03:15,035 [wrapper] ==== pilot stdout END ====
[2025-11-26 04:03:15] 2025-11-26 10:03:15,038 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 04:03:15] 2025-11-26 10:03:15,041 [wrapper] pilotpid: 447822
[2025-11-26 04:03:15] 2025-11-26 10:03:15,043 [wrapper] Pilot exit status: 0
[2025-11-26 04:03:15] 2025-11-26 10:03:15,052 [wrapper] pandaids: 6895345556
[2025-11-26 04:03:15] 2025-11-26 10:03:15,083 [wrapper] cleanup supervisor_pilot  547778 447823
[2025-11-26 04:03:15] 2025-11-26 10:03:15,086 [wrapper] Test setup, not cleaning
[2025-11-26 04:03:15] 2025-11-26 10:03:15,089 [wrapper] apfmon messages muted
[2025-11-26 04:03:15] 2025-11-26 10:03:15,091 [wrapper] ==== wrapper stdout END ====
[2025-11-26 04:03:15] 2025-11-26 10:03:15,094 [wrapper] ==== wrapper stderr END ====
[2025-11-26 04:03:15]  *** Error codes and diagnostics ***
[2025-11-26 04:03:15]     "exeErrorCode": 0,
[2025-11-26 04:03:15]     "exeErrorDiag": "",
[2025-11-26 04:03:15]     "pilotErrorCode": 0,
[2025-11-26 04:03:15]     "pilotErrorDiag": "",
[2025-11-26 04:03:15]  *** Listing of results directory ***
[2025-11-26 04:03:15] total 1328224
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc    576529 Nov 22 11:43 pilot3.tar.gz
[2025-11-26 04:03:15] -rwx------ 1 boinc boinc     36292 Nov 22 11:44 runpilot2-wrapper.sh
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc      5112 Nov 22 11:44 queuedata.json
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc       100 Nov 25 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 04:03:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 14:26 run_atlas
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc       105 Nov 25 14:26 job.xml
[2025-11-26 04:03:15] -rw-r--r-- 2 boinc boinc 410363180 Nov 25 14:26 EVNT.47483658._001104.pool.root.1
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc      9535 Nov 25 14:26 init_data.xml
[2025-11-26 04:03:15] drwxrwx--x 2 boinc boinc      4096 Nov 25 14:26 shared
[2025-11-26 04:03:15] -rw-r--r-- 2 boinc boinc    590096 Nov 25 14:26 input.tar.gz
[2025-11-26 04:03:15] -rw-r--r-- 2 boinc boinc     15847 Nov 25 14:26 start_atlas.sh
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc         0 Nov 25 14:26 boinc_lockfile
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc      2783 Nov 25 14:26 pandaJob.out
[2025-11-26 04:03:15] -rw------- 1 boinc boinc    991893 Nov 25 14:26 agis_schedconf.cvmfs.json
[2025-11-26 04:03:15] drwx------ 5 boinc boinc      4096 Nov 25 14:26 pilot3
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc       533 Nov 26 03:56 boinc_task_state.xml
[2025-11-26 04:03:15] -rw------- 1 boinc boinc 929062475 Nov 26 04:02 HITS.47556149._000910.pool.root.1
[2025-11-26 04:03:15] -rw------- 1 boinc boinc      1031 Nov 26 04:02 memory_monitor_summary.json
[2025-11-26 04:03:15] -rw------- 1 boinc boinc   1516240 Nov 26 04:02 agis_ddmendpoints.agis.ALL.json
[2025-11-26 04:03:15] -rw------- 1 boinc boinc   1575424 Nov 26 04:02 log.47556149._000910.job.log.tgz.1
[2025-11-26 04:03:15] -rw------- 1 boinc boinc      8572 Nov 26 04:02 heartbeat.json
[2025-11-26 04:03:15] -rw------- 1 boinc boinc        95 Nov 26 04:02 pilot_heartbeat.json
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc      8192 Nov 26 04:02 boinc_mmap_file
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc        29 Nov 26 04:02 wrapper_checkpoint.txt
[2025-11-26 04:03:15] -rw------- 1 boinc boinc      4550 Nov 26 04:03 pilotlog.txt
[2025-11-26 04:03:15] -rw------- 1 boinc boinc   6802344 Nov 26 04:03 log.47556149._000910.job.log.1
[2025-11-26 04:03:15] -rw------- 1 boinc boinc       353 Nov 26 04:03 output.list
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc       620 Nov 26 04:03 runtime_log
[2025-11-26 04:03:15] -rw------- 1 boinc boinc   8396800 Nov 26 04:03 result.tar.gz
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc      8731 Nov 26 04:03 runtime_log.err
[2025-11-26 04:03:15] -rw------- 1 boinc boinc       652 Nov 26 04:03 9SmKDmPq6g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhJKKDmAYfvXn.diag
[2025-11-26 04:03:15] -rw-r--r-- 1 boinc boinc     20795 Nov 26 04:03 stderr.txt
[2025-11-26 04:03:15] HITS file was successfully produced:
[2025-11-26 04:03:15] -rw------- 1 boinc boinc 929062475 Nov 26 04:02 shared/HITS.pool.root.1
[2025-11-26 04:03:15]  *** Contents of shared directory: ***
[2025-11-26 04:03:15] total 1316840
[2025-11-26 04:03:15] -rw-r--r-- 2 boinc boinc 410363180 Nov 25 14:26 ATLAS.root_0
[2025-11-26 04:03:15] -rw-r--r-- 2 boinc boinc    590096 Nov 25 14:26 input.tar.gz
[2025-11-26 04:03:15] -rw-r--r-- 2 boinc boinc     15847 Nov 25 14:26 start_atlas.sh
[2025-11-26 04:03:15] -rw------- 1 boinc boinc 929062475 Nov 26 04:02 HITS.pool.root.1
[2025-11-26 04:03:15] -rw------- 1 boinc boinc   8396800 Nov 26 04:03 result.tar.gz
04:03:16 (444024): run_atlas exited; CPU time 193305.348877
04:03:16 (444024): called boinc_finish(0)

</stderr_txt>
]]>

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