Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:40:04 (3474583): wrapper (7.7.26015): starting
16:40:04 (3474583): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 16:40:04] Arguments: --nthreads 3
[2025-11-23 16:40:04] Threads: 3
[2025-11-23 16:40:04] Checking for CVMFS
[2025-11-23 16:40:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 16:40:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 16:40:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 16:40:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 16:40:05] 2.9.2.0 2932062 352 69408 153213 1 88 34867334 36864001 0 130560 0 1602280 99.998 14503 19921 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 16:40:05] CVMFS is ok
[2025-11-23 16:40:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 16:40:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 16:40:05] Further information can be found at the LHC@home message board.
[2025-11-23 16:40:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 16:40:05] Checking for apptainer binary...
[2025-11-23 16:40:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 16:40:05] Running /usr/bin/apptainer --version
[2025-11-23 16:40:05] apptainer version 1.4.1-1.1
[2025-11-23 16:40:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 16:40:05] thA335
[2025-11-23 16:40:05] apptainer works
[2025-11-23 16:40:05] Set ATHENA_PROC_NUMBER=3
[2025-11-23 16:40:05] Set ATHENA_CORE_NUMBER=3
[2025-11-23 16:40:05] Starting ATLAS job with PandaID=6893864494
[2025-11-23 16:40:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 16:44:22]  *** The last 200 lines of the pilot log: ***
[2025-11-23 16:44:22] 2025-11-23 15:43:28,782 | INFO     | [data] copytool_out thread has finished
[2025-11-23 16:44:22] 2025-11-23 15:43:28,902 | INFO     | [job] control thread has finished
[2025-11-23 16:44:22] 2025-11-23 15:43:28,942 | INFO     | [job] validate thread has finished
[2025-11-23 16:44:22] 2025-11-23 15:43:28,944 | INFO     | [payload] control thread has finished
[2025-11-23 16:44:22] 2025-11-23 15:43:29,023 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 16:44:22] 2025-11-23 15:43:29,079 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 16:44:22] 2025-11-23 15:43:29,082 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 16:44:22] 2025-11-23 15:43:29,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 16:44:22] 2025-11-23 15:43:33,639 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 16:44:22] 2025-11-23 15:43:57,503 | INFO     | PID=3478312 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 16:44:22] 2025-11-23 15:43:57,503 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 16:44:22] 2025-11-23 15:43:57,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 16:44:22] 2025-11-23 15:43:57,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 16:44:22] 2025-11-23 15:44:16,700 | INFO     | [monitor] cgroup control has ended
[2025-11-23 16:44:22] 2025-11-23 15:44:17,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140142485628736)>', '<ExcThread(monitor, started 140141695858432)>']
[2025-11-23 16:44:22] 2025-11-23 15:44:17,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 16:44:22] 2025-11-23 15:44:17,607 | INFO     | [monitor] control thread has ended
[2025-11-23 16:44:22] 2025-11-23 15:44:22,509 | INFO     | all workflow threads have been joined
[2025-11-23 16:44:22] 2025-11-23 15:44:22,510 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 16:44:22] 2025-11-23 15:44:22,510 | INFO     | traces error code: 0
[2025-11-23 16:44:22] 2025-11-23 15:44:22,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 16:44:22] 2025-11-23 15:44:22,557 [wrapper] ==== pilot stdout END ====
[2025-11-23 16:44:22] 2025-11-23 15:44:22,560 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 16:44:22] 2025-11-23 15:44:22,563 [wrapper] pilotpid: 3478312
[2025-11-23 16:44:22] 2025-11-23 15:44:22,566 [wrapper] Pilot exit status: 0
[2025-11-23 16:44:22] 2025-11-23 15:44:22,573 [wrapper] pandaids: 6893864494
[2025-11-23 16:44:22] 2025-11-23 15:44:22,592 [wrapper] cleanup supervisor_pilot 3478318 3478313
[2025-11-23 16:44:22] 2025-11-23 15:44:22,594 [wrapper] Test setup, not cleaning
[2025-11-23 16:44:22] 2025-11-23 15:44:22,597 [wrapper] apfmon messages muted
[2025-11-23 16:44:22] 2025-11-23 15:44:22,600 [wrapper] ==== wrapper stdout END ====
[2025-11-23 16:44:22] 2025-11-23 15:44:22,603 [wrapper] ==== wrapper stderr END ====
[2025-11-23 16:44:22]  *** Error codes and diagnostics ***
[2025-11-23 16:44:22]     "exeErrorCode": 65,
[2025-11-23 16:44:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 16:44:22]     "pilotErrorCode": 1305,
[2025-11-23 16:44:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 16:44:22]  *** Listing of results directory ***
[2025-11-23 16:44:22] total 404036
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc    598293 Nov  6 09:41 pilot3.tar.gz
[2025-11-23 16:44:22] -rwx------ 1 boinc boinc     36292 Nov 20 15:27 runpilot2-wrapper.sh
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:27 queuedata.json
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc       100 Nov 23 16:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 16:44:22] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 16:40 run_atlas
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc       105 Nov 23 16:40 job.xml
[2025-11-23 16:44:22] -rw-r--r-- 2 boinc boinc 409481476 Nov 23 16:40 EVNT.47493127._000609.pool.root.1
[2025-11-23 16:44:22] -rw-r--r-- 2 boinc boinc    611278 Nov 23 16:40 input.tar.gz
[2025-11-23 16:44:22] -rw-r--r-- 2 boinc boinc     15847 Nov 23 16:40 start_atlas.sh
[2025-11-23 16:44:22] drwxrwx--x 2 boinc boinc      4096 Nov 23 16:40 shared
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc         0 Nov 23 16:40 boinc_setup_complete
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc      6194 Nov 23 16:40 init_data.xml
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc         0 Nov 23 16:40 boinc_lockfile
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc      2786 Nov 23 16:40 pandaJob.out
[2025-11-23 16:44:22] -rw------- 1 boinc boinc    989785 Nov 23 16:40 agis_schedconf.cvmfs.json
[2025-11-23 16:44:22] -rw------- 1 boinc boinc   1526164 Nov 23 16:40 agis_ddmendpoints.agis.ALL.json
[2025-11-23 16:44:22] drwx------ 7 boinc boinc      4096 Nov 23 16:40 pilot3
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc       522 Nov 23 16:41 boinc_task_state.xml
[2025-11-23 16:44:22] -rw------- 1 boinc boinc       947 Nov 23 16:41 memory_monitor_summary.json
[2025-11-23 16:44:22] -rw------- 1 boinc boinc     55685 Nov 23 16:41 log.47523449._006090.job.log.tgz.1
[2025-11-23 16:44:22] -rw------- 1 boinc boinc        95 Nov 23 16:43 pilot_heartbeat.json
[2025-11-23 16:44:22] -rw------- 1 boinc boinc      8385 Nov 23 16:43 heartbeat.json
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc      8192 Nov 23 16:44 boinc_mmap_file
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc        22 Nov 23 16:44 wrapper_checkpoint.txt
[2025-11-23 16:44:22] -rw------- 1 boinc boinc      4938 Nov 23 16:44 pilotlog.txt
[2025-11-23 16:44:22] -rw------- 1 boinc boinc     94964 Nov 23 16:44 log.47523449._006090.job.log.1
[2025-11-23 16:44:22] -rw------- 1 boinc boinc       186 Nov 23 16:44 output.list
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc       620 Nov 23 16:44 runtime_log
[2025-11-23 16:44:22] -rw------- 1 boinc boinc    174080 Nov 23 16:44 result.tar.gz
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc      8744 Nov 23 16:44 runtime_log.err
[2025-11-23 16:44:22] -rw------- 1 boinc boinc       649 Nov 23 16:44 IlNMDmCoKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmu4HKDmjiSHLm.diag
[2025-11-23 16:44:22] -rw-r--r-- 1 boinc boinc      6016 Nov 23 16:44 stderr.txt
[2025-11-23 16:44:22] No HITS result produced
[2025-11-23 16:44:22]  *** Contents of shared directory: ***
[2025-11-23 16:44:22] total 400680
[2025-11-23 16:44:22] -rw-r--r-- 2 boinc boinc 409481476 Nov 23 16:40 ATLAS.root_0
[2025-11-23 16:44:22] -rw-r--r-- 2 boinc boinc    611278 Nov 23 16:40 input.tar.gz
[2025-11-23 16:44:22] -rw-r--r-- 2 boinc boinc     15847 Nov 23 16:40 start_atlas.sh
[2025-11-23 16:44:22] -rw------- 1 boinc boinc    174080 Nov 23 16:44 result.tar.gz
16:44:23 (3474583): run_atlas exited; CPU time 30.659427
16:44:23 (3474583): called boinc_finish(0)

</stderr_txt>
]]>

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