Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:30:40 (3296288): wrapper (7.7.26015): starting
13:30:40 (3296288): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 13:30:40] Arguments: --nthreads 8
[2025-11-23 13:30:40] Threads: 8
[2025-11-23 13:30:40] Checking for CVMFS
[2025-11-23 13:30:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 13:30:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 13:30:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 13:30:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 13:30:43] 2.13.2.0 5986 31637 365480 153217 0 326 38917240 40960001 15242 16776704 0 62103687 99.792 53855117 36172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 13:30:43] CVMFS is ok
[2025-11-23 13:30:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 13:30:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 13:30:43] Further information can be found at the LHC@home message board.
[2025-11-23 13:30:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 13:30:43] Checking for apptainer binary...
[2025-11-23 13:30:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 13:30:43] Running /usr/bin/apptainer --version
[2025-11-23 13:30:43] apptainer version 1.4.4-1.el9
[2025-11-23 13:30:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 13:30:44] c-210-31-1.aglt2.org
[2025-11-23 13:30:44] apptainer works
[2025-11-23 13:30:44] Set ATHENA_PROC_NUMBER=8
[2025-11-23 13:30:44] Set ATHENA_CORE_NUMBER=8
[2025-11-23 13:30:45] Starting ATLAS job with PandaID=6895335439
[2025-11-23 13:30:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:23:27]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:23:27] 2025-11-25 17:22:25,688 | INFO     | time since job start (168623s) is within the limit (172800.0s)
[2025-11-25 12:23:27] 2025-11-25 17:22:26,515 | INFO     | monitor loop #9925: job 0:6895335439 is in state 'finished'
[2025-11-25 12:23:27] 2025-11-25 17:22:26,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:23:27] 2025-11-25 17:22:27,696 | INFO     | time since job start (168625s) is within the limit (172800.0s)
[2025-11-25 12:23:27] 2025-11-25 17:22:29,020 | INFO     | monitor loop #9926: job 0:6895335439 is in state 'finished'
[2025-11-25 12:23:27] 2025-11-25 17:22:29,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:23:27] 2025-11-25 17:22:29,705 | INFO     | time since job start (168627s) is within the limit (172800.0s)
[2025-11-25 12:23:27] 2025-11-25 17:22:31,549 | INFO     | monitor loop #9927: job 0:6895335439 is in state 'finished'
[2025-11-25 12:23:27] 2025-11-25 17:22:31,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:23:27] 2025-11-25 17:22:31,713 | INFO     | time since job start (168629s) is within the limit (172800.0s)
[2025-11-25 12:23:27] 2025-11-25 17:22:33,562 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 12:23:27] 2025-11-25 17:22:33,566 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2851.9812500000003
[2025-11-25 12:23:27] 2025-11-25 17:22:33,579 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895335439/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 12:23:27] 2025-11-25 17:22:33,580 | INFO     | extracted standard info from prmon json
[2025-11-25 12:23:27] 2025-11-25 17:22:33,580 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 12:23:27] 2025-11-25 17:22:33,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 12:23:27] 2025-11-25 17:22:33,713 | INFO     | fitting pss+swap vs Time
[2025-11-25 12:23:27] 2025-11-25 17:22:33,737 | INFO     | time since job start (168631s) is within the limit (172800.0s)
[2025-11-25 12:23:27] 2025-11-25 17:22:33,744 | INFO     | sum of square deviations: 6526415723797.989
[2025-11-25 12:23:27] 2025-11-25 17:22:34,058 | INFO     | monitor loop #9928: job 0:6895335439 is in state 'finished'
[2025-11-25 12:23:27] 2025-11-25 17:22:34,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:23:27] 2025-11-25 17:22:34,445 | INFO     | sum of deviations: 21009989281911.324
[2025-11-25 12:23:27] 2025-11-25 17:22:34,446 | INFO     | mean x: 1764007077.509598
[2025-11-25 12:23:27] 2025-11-25 17:22:34,446 | INFO     | mean y: 2933316.004708439
[2025-11-25 12:23:27] 2025-11-25 17:22:34,446 | INFO     | intersect: -5675799293.159301
[2025-11-25 12:23:27] 2025-11-25 17:22:34,453 | INFO     | chi2: 22.858579615977042
[2025-11-25 12:23:27] 2025-11-25 17:22:34,461 | INFO     | sum of square deviations: 6491028337095.742
[2025-11-25 12:23:27] 2025-11-25 17:22:34,746 | INFO     | sum of deviations: 21904517968352.83
[2025-11-25 12:23:27] 2025-11-25 17:22:34,747 | INFO     | mean x: 1764006925.0214078
[2025-11-25 12:23:27] 2025-11-25 17:22:34,747 | INFO     | mean y: 2937170.797895501
[2025-11-25 12:23:27] 2025-11-25 17:22:34,747 | INFO     | intersect: -5949851721.619524
[2025-11-25 12:23:27] 2025-11-25 17:22:34,754 | INFO     | chi2: 20.05991945847659
[2025-11-25 12:23:27] 2025-11-25 17:22:34,755 | INFO     | current chi2=20.05991945847659 (change=12.24336859296509 %)
[2025-11-25 12:23:27] 2025-11-25 17:22:34,755 | INFO     | right removable region: 2755
[2025-11-25 12:23:27] 2025-11-25 17:22:34,762 | INFO     | sum of square deviations: 6491017373565.732
[2025-11-25 12:23:27] 2025-11-25 17:22:35,901 | INFO     | time since job start (168633s) is within the limit (172800.0s)
[2025-11-25 12:23:27] 2025-11-25 17:22:36,358 | INFO     | sum of deviations: 19866544855029.824
[2025-11-25 12:23:27] 2025-11-25 17:22:36,358 | INFO     | mean x: 1764007230.0214078
[2025-11-25 12:23:27] 2025-11-25 17:22:36,358 | INFO     | mean y: 2938242.241291727
[2025-11-25 12:23:27] 2025-11-25 17:22:36,359 | INFO     | intersect: -5396019539.405497
[2025-11-25 12:23:27] 2025-11-25 17:22:36,505 | INFO     | chi2: 18.517235007652243
[2025-11-25 12:23:27] 2025-11-25 17:22:36,506 | INFO     | current chi2=18.517235007652243 (change=18.992188846635113 %)
[2025-11-25 12:23:27] 2025-11-25 17:22:36,506 | INFO     | left removable region: 10
[2025-11-25 12:23:27] 2025-11-25 17:22:36,510 | INFO     | sum of square deviations: 6413605222702.137
[2025-11-25 12:23:27] 2025-11-25 17:22:36,716 | INFO     | monitor loop #9929: job 0:6895335439 is in state 'finished'
[2025-11-25 12:23:27] 2025-11-25 17:22:36,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:23:27] 2025-11-25 17:22:37,661 | INFO     | sum of deviations: 20028090226515.293
[2025-11-25 12:23:27] 2025-11-25 17:22:37,661 | INFO     | mean x: 1764007199.5471766
[2025-11-25 12:23:27] 2025-11-25 17:22:37,662 | INFO     | mean y: 2947206.553734062
[2025-11-25 12:23:27] 2025-11-25 17:22:37,666 | INFO     | intersect: -5505607518.283002
[2025-11-25 12:23:27] 2025-11-25 17:22:37,669 | INFO     | chi2: 11.997934313863992
[2025-11-25 12:23:27] 2025-11-25 17:22:37,669 | INFO     | current memory leak: 3.12 B/s (using 2745 data points, chi2=12.00)
[2025-11-25 12:23:27] 2025-11-25 17:22:37,677 | INFO     | could have reported an average CPU frequency of 2752 MHz (95 samples)
[2025-11-25 12:23:27] 2025-11-25 17:22:37,677 | INFO     | ..............................
[2025-11-25 12:23:27] 2025-11-25 17:22:37,677 | INFO     | . Timing measurements:
[2025-11-25 12:23:27] 2025-11-25 17:22:37,677 | INFO     | . get job = 0 s
[2025-11-25 12:23:27] 2025-11-25 17:22:37,677 | INFO     | . initial setup = 4 s
[2025-11-25 12:23:27] 2025-11-25 17:22:37,677 | INFO     | . payload setup = 52 s
[2025-11-25 12:23:27] 2025-11-25 17:22:37,677 | INFO     | . stage-in = 0 s
[2025-11-25 12:23:27] 2025-11-25 17:22:37,677 | INFO     | . payload execution = 168449 s
[2025-11-25 12:23:27] 2025-11-25 17:22:37,677 | INFO     | . stage-out = 10 s
[2025-11-25 12:23:27] 2025-11-25 17:22:37,677 | INFO     | . log creation = 4 s
[2025-11-25 12:23:27] 2025-11-25 17:22:37,678 | INFO     | ..............................
[2025-11-25 12:23:27] 2025-11-25 17:22:37,909 | INFO     | 
[2025-11-25 12:23:27] 2025-11-25 17:22:37,910 | INFO     | job summary report
[2025-11-25 12:23:27] 2025-11-25 17:22:37,910 | INFO     | --------------------------------------------------
[2025-11-25 12:23:27] 2025-11-25 17:22:37,910 | INFO     | PanDA job id: 6895335439
[2025-11-25 12:23:27] 2025-11-25 17:22:37,910 | INFO     | task id: 47556137
[2025-11-25 12:23:27] 2025-11-25 17:22:37,910 | INFO     | errors: (none)
[2025-11-25 12:23:27] 2025-11-25 17:22:37,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | pilot state: finished 
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | transexitcode: 0
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | exeerrorcode: 0
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | exeerrordiag: 
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | exitcode: 0
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | exitmsg: OK
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | cpuconsumptiontime: 260811 s
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | nevents: 1000
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | neventsw: 0
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | pid: 3308600
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | pgrp: 3308600
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | corecount: 8
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | event service: False
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | sizes: {0: 2297979, 1: 2298664, 2: 2298692, 3: 2298891, 14: 2298891, 25: 2298919, 37: 2299075, 42: 2299365, 48: 2299421, 168507: 2402548, 168518: 2412338, 168519: 
[2025-11-25 12:23:27] 2025-11-25 17:22:37,911 | INFO     | --------------------------------------------------
[2025-11-25 12:23:27] 2025-11-25 17:22:37,912 | INFO     | 
[2025-11-25 12:23:27] 2025-11-25 17:22:37,912 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 12:23:27] 2025-11-25 17:22:37,960 | INFO     | time since job start (168635s) is within the limit (172800.0s)
[2025-11-25 12:23:27] 2025-11-25 17:22:38,077 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,077 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,077 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,079 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 12:23:27] 2025-11-25 17:22:38,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,079 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 12:23:27] 2025-11-25 17:22:38,079 | INFO     | job 6895335439 has completed (purged errors)
[2025-11-25 12:23:27] 2025-11-25 17:22:38,079 | INFO     | overall cleanup function is called
[2025-11-25 12:23:27] 2025-11-25 17:22:39,095 | INFO     | --- collectZombieJob: --- 10, [3308600]
[2025-11-25 12:23:27] 2025-11-25 17:22:39,095 | INFO     | zombie collector waiting for pid 3308600
[2025-11-25 12:23:27] 2025-11-25 17:22:39,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 12:23:27] 2025-11-25 17:22:39,112 | INFO     | collected zombie processes
[2025-11-25 12:23:27] 2025-11-25 17:22:39,112 | INFO     | will attempt to kill all subprocesses of pid=3308600
[2025-11-25 12:23:27] 2025-11-25 17:22:41,962 | INFO     | process IDs to be killed: [3308600] (in reverse order)
[2025-11-25 12:23:27] 2025-11-25 17:22:42,173 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 12:23:27] 2025-11-25 17:22:42,173 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 12:23:27] 2025-11-25 17:22:42,376 | INFO     | did not find any defunct processes belonging to 3308600
[2025-11-25 12:23:27] 2025-11-25 17:22:42,501 | INFO     | did not find any defunct processes belonging to 3308600
[2025-11-25 12:23:27] 2025-11-25 17:22:42,660 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 12:23:27] 2025-11-25 17:22:42,660 | INFO     | ready for new job
[2025-11-25 12:23:27] 2025-11-25 17:22:42,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 12:23:27] 2025-11-25 17:22:42,704 | INFO     | ***************************************
[2025-11-25 12:23:27] 2025-11-25 17:22:42,705 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 12:23:27] 2025-11-25 17:22:42,705 | INFO     | ***************************************
[2025-11-25 12:23:27] 2025-11-25 17:22:42,705 | INFO     | 
[2025-11-25 12:23:27] 2025-11-25 17:22:42,712 | INFO     | architecture information:
[2025-11-25 12:23:27] 2025-11-25 17:22:42,716 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:23:27] 2025-11-25 17:22:42,778 | INFO     | cat /etc/os-release:
[2025-11-25 12:23:27] NAME="CentOS Linux"
[2025-11-25 12:23:27] VERSION="7 (Core)"
[2025-11-25 12:23:27] ID="centos"
[2025-11-25 12:23:27] ID_LIKE="rhel fedora"
[2025-11-25 12:23:27] VERSION_ID="7"
[2025-11-25 12:23:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:23:27] ANSI_COLOR="0;31"
[2025-11-25 12:23:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:23:27] HOME_URL="https://www.centos.org/"
[2025-11-25 12:23:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:23:27] 
[2025-11-25 12:23:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:23:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:23:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:23:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:23:27] 
[2025-11-25 12:23:27] 2025-11-25 17:22:42,778 | INFO     | ***************************************
[2025-11-25 12:23:27] 2025-11-25 17:22:43,394 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 12:23:27] 2025-11-25 17:22:43,635 | INFO     | sufficient remaining disk space (69606572032 B)
[2025-11-25 12:23:27] 2025-11-25 17:22:43,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:23:27] 2025-11-25 17:22:43,636 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:23:27] 2025-11-25 17:22:43,636 | INFO     | update_server=False
[2025-11-25 12:23:27] 2025-11-25 17:22:43,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:23:27] 2025-11-25 17:22:43,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:23:27] 2025-11-25 17:22:43,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:23:27] 2025-11-25 17:22:43,649 | INFO     | aborting loop
[2025-11-25 12:23:27] 2025-11-25 17:22:43,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:23:27] 2025-11-25 17:22:43,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:23:27] 2025-11-25 17:22:43,768 | INFO     | all data control threads have been joined
[2025-11-25 12:23:27] 2025-11-25 17:22:44,515 | INFO     | all payload control threads have been joined
[2025-11-25 12:23:27] 2025-11-25 17:22:44,642 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:44,655 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:44,669 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:44,773 | INFO     | [data] control thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:45,237 | INFO     | all job control threads have been joined
[2025-11-25 12:23:27] 2025-11-25 17:22:45,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:45,523 | INFO     | [payload] control thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:45,536 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:45,542 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:45,597 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:45,611 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:45,660 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:45,968 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:46,138 | INFO     | [job] validate thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:46,143 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:46,250 | INFO     | [job] control thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:22:47,667 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:23:27] 2025-11-25 17:23:13,551 | INFO     | PID=3300727 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 12:23:27] 2025-11-25 17:23:13,578 | INFO     | .. there are 18 such processes running
[2025-11-25 12:23:27] 2025-11-25 17:23:13,578 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:23:27] 2025-11-25 17:23:13,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:23:27] 2025-11-25 17:23:13,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:23:27] 2025-11-25 17:23:18,453 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:23:27] 2025-11-25 17:23:19,462 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357908219712)>', '<ExcThread(monitor, started 140357551503104)>']
[2025-11-25 12:23:27] 2025-11-25 17:23:19,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:23:27] 2025-11-25 17:23:19,645 | INFO     | [monitor] control thread has ended
[2025-11-25 12:23:27] 2025-11-25 17:23:24,490 | INFO     | all workflow threads have been joined
[2025-11-25 12:23:27] 2025-11-25 17:23:24,490 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:23:27] 2025-11-25 17:23:24,490 | INFO     | traces error code: 0
[2025-11-25 12:23:27] 2025-11-25 17:23:24,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:23:27] 2025-11-25 17:23:25,907 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:23:27] 2025-11-25 17:23:25,916 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:23:27] 2025-11-25 17:23:25,950 [wrapper] pilotpid: 3300727
[2025-11-25 12:23:27] 2025-11-25 17:23:26,009 [wrapper] Pilot exit status: 0
[2025-11-25 12:23:27] 2025-11-25 17:23:26,165 [wrapper] pandaids: 6895335439
[2025-11-25 12:23:27] 2025-11-25 17:23:26,365 [wrapper] cleanup supervisor_pilot  364262 3300728
[2025-11-25 12:23:27] 2025-11-25 17:23:26,378 [wrapper] Test setup, not cleaning
[2025-11-25 12:23:27] 2025-11-25 17:23:26,394 [wrapper] apfmon messages muted
[2025-11-25 12:23:27] 2025-11-25 17:23:26,422 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:23:27] 2025-11-25 17:23:26,446 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:23:27]  *** Error codes and diagnostics ***
[2025-11-25 12:23:27]     "exeErrorCode": 0,
[2025-11-25 12:23:27]     "exeErrorDiag": "",
[2025-11-25 12:23:27]     "pilotErrorCode": 0,
[2025-11-25 12:23:27]     "pilotErrorDiag": "",
[2025-11-25 12:23:27]  *** Listing of results directory ***
[2025-11-25 12:23:27] total 1337444
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 23:34 pilot3.tar.gz
[2025-11-25 12:23:27] -rwx------. 1 boincer umatlas     36292 Nov 21 23:44 runpilot2-wrapper.sh
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 23:44 queuedata.json
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas       100 Nov 23 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:23:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 13:30 run_atlas
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas       105 Nov 23 13:30 job.xml
[2025-11-25 12:23:27] -rw-r--r--. 2 boincer umatlas 409211244 Nov 23 13:30 EVNT.47483658._000256.pool.root.1
[2025-11-25 12:23:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 13:30 start_atlas.sh
[2025-11-25 12:23:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 13:30 shared
[2025-11-25 12:23:27] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 13:30 input.tar.gz
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas         0 Nov 23 13:30 boinc_lockfile
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas      2786 Nov 23 13:30 pandaJob.out
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas        57 Nov 23 13:30 setup.sh.local
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas    989786 Nov 23 13:31 agis_schedconf.cvmfs.json
[2025-11-25 12:23:27] drwx------. 5 boincer umatlas      4096 Nov 23 13:32 pilot3
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas       534 Nov 25 12:07 boinc_task_state.xml
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas      6845 Nov 25 12:18 init_data.xml
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas 907769849 Nov 25 12:21 HITS.47556137._002523.pool.root.1
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas      1072 Nov 25 12:21 memory_monitor_summary.json
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas   1516240 Nov 25 12:21 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas   3386471 Nov 25 12:22 log.47556137._002523.job.log.tgz.1
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas      8649 Nov 25 12:22 heartbeat.json
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas        95 Nov 25 12:22 pilot_heartbeat.json
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 12:23 boinc_mmap_file
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas      4824 Nov 25 12:23 pilotlog.txt
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas        30 Nov 25 12:23 wrapper_checkpoint.txt
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas  20937367 Nov 25 12:23 log.47556137._002523.job.log.1
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas       353 Nov 25 12:23 output.list
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas       620 Nov 25 12:23 runtime_log
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas  24340480 Nov 25 12:23 result.tar.gz
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas      9354 Nov 25 12:23 runtime_log.err
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas       670 Nov 25 12:23 96qKDmoeug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmswJKDmeHQDfn.diag
[2025-11-25 12:23:27] -rw-r--r--. 1 boincer umatlas     21825 Nov 25 12:23 stderr.txt
[2025-11-25 12:23:27] HITS file was successfully produced:
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas 907769849 Nov 25 12:21 shared/HITS.pool.root.1
[2025-11-25 12:23:27]  *** Contents of shared directory: ***
[2025-11-25 12:23:27] total 1310492
[2025-11-25 12:23:27] -rw-r--r--. 2 boincer umatlas 409211244 Nov 23 13:30 ATLAS.root_0
[2025-11-25 12:23:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 13:30 start_atlas.sh
[2025-11-25 12:23:27] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 13:30 input.tar.gz
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas 907769849 Nov 25 12:21 HITS.pool.root.1
[2025-11-25 12:23:27] -rw-------. 1 boincer umatlas  24340480 Nov 25 12:23 result.tar.gz
12:23:28 (3296288): run_atlas exited; CPU time 264276.743366
12:23:28 (3296288): called boinc_finish(0)

</stderr_txt>
]]>

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