Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
23:19:21 (138618): wrapper (7.7.26015): starting
23:19:21 (138618): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 23:19:21] Arguments: --nthreads 4
[2025-11-23 23:19:21] Threads: 4
[2025-11-23 23:19:21] Checking for CVMFS
[2025-11-23 23:19:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 23:19:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 23:19:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 23:19:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 23:19:21] 2.11.3.0 33379 806 50600 153235 3 80 3558191 4194304 0 130560 0 246800 98.086 322193 464 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2025-11-23 23:19:21] CVMFS is ok
[2025-11-23 23:19:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 23:19:21] Checking for apptainer binary...
[2025-11-23 23:19:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 23:19:21] Running /usr/bin/apptainer --version
[2025-11-23 23:19:21] apptainer version 1.4.4-1.fc42
[2025-11-23 23:19:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 23:19:21] R7OwensSE
[2025-11-23 23:19:21] apptainer works
[2025-11-23 23:19:21] Set ATHENA_PROC_NUMBER=4
[2025-11-23 23:19:21] Set ATHENA_CORE_NUMBER=4
[2025-11-23 23:19:21] Starting ATLAS job with PandaID=6894252925
[2025-11-23 23:19:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 11:18:47]  *** The last 200 lines of the pilot log: ***
[2025-11-24 11:18:47] 2025-11-24 17:18:04,535 | INFO     | time since job start (43112s) is within the limit (172800.0s)
[2025-11-24 11:18:47] 2025-11-24 17:18:05,710 | INFO     | monitor loop #3244: job 0:6894252925 is in state 'finished'
[2025-11-24 11:18:47] 2025-11-24 17:18:05,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,540 | INFO     | time since job start (43114s) is within the limit (172800.0s)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,626 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 11:18:47] 2025-11-24 17:18:06,629 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3423.0454375
[2025-11-24 11:18:47] 2025-11-24 17:18:06,631 | INFO     | using path: /data/boinc/slots/11/PanDA_Pilot-6894252925/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,632 | INFO     | extracted standard info from prmon json
[2025-11-24 11:18:47] 2025-11-24 17:18:06,632 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 11:18:47] 2025-11-24 17:18:06,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 11:18:47] 2025-11-24 17:18:06,641 | INFO     | fitting pss+swap vs Time
[2025-11-24 11:18:47] 2025-11-24 17:18:06,642 | INFO     | sum of square deviations: 109581135538.0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,651 | INFO     | sum of deviations: 169484001250.0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,651 | INFO     | mean x: 1763983129.0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,651 | INFO     | mean y: 2308294.973125884
[2025-11-24 11:18:47] 2025-11-24 17:18:06,651 | INFO     | intersect: -2725961651.9717174
[2025-11-24 11:18:47] 2025-11-24 17:18:06,652 | INFO     | chi2: 4.089677750833223
[2025-11-24 11:18:47] 2025-11-24 17:18:06,653 | INFO     | sum of square deviations: 107272617835.5
[2025-11-24 11:18:47] 2025-11-24 17:18:06,662 | INFO     | sum of deviations: 328853694796.99994
[2025-11-24 11:18:47] 2025-11-24 17:18:06,662 | INFO     | mean x: 1763982976.5
[2025-11-24 11:18:47] 2025-11-24 17:18:06,662 | INFO     | mean y: 2318812.4615384615
[2025-11-24 11:18:47] 2025-11-24 17:18:06,662 | INFO     | intersect: -5405326969.71367
[2025-11-24 11:18:47] 2025-11-24 17:18:06,663 | INFO     | chi2: 1.7303616274735814
[2025-11-24 11:18:47] 2025-11-24 17:18:06,663 | INFO     | current chi2=1.7303616274735814 (change=57.68953612247222 %)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,664 | INFO     | sum of square deviations: 104996751908.0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,673 | INFO     | sum of deviations: 333288610798.0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,673 | INFO     | mean x: 1763982824.0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,673 | INFO     | mean y: 2319106.31276901
[2025-11-24 11:18:47] 2025-11-24 17:18:06,673 | INFO     | intersect: -5597048247.428181
[2025-11-24 11:18:47] 2025-11-24 17:18:06,673 | INFO     | chi2: 1.698841099750499
[2025-11-24 11:18:47] 2025-11-24 17:18:06,674 | INFO     | current chi2=1.698841099750499 (change=1.8216150440820835 %)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,674 | INFO     | right removable region: 696
[2025-11-24 11:18:47] 2025-11-24 17:18:06,674 | INFO     | sum of square deviations: 107272617835.5
[2025-11-24 11:18:47] 2025-11-24 17:18:06,683 | INFO     | sum of deviations: 60347153142.500015
[2025-11-24 11:18:47] 2025-11-24 17:18:06,683 | INFO     | mean x: 1763983281.5
[2025-11-24 11:18:47] 2025-11-24 17:18:06,684 | INFO     | mean y: 2315481.9301994303
[2025-11-24 11:18:47] 2025-11-24 17:18:06,684 | INFO     | intersect: -990028802.9154528
[2025-11-24 11:18:47] 2025-11-24 17:18:06,684 | INFO     | chi2: 2.5226049920787843
[2025-11-24 11:18:47] 2025-11-24 17:18:06,684 | INFO     | current chi2=2.5226049920787843 (change=38.31775641577546 %)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,685 | INFO     | sum of square deviations: 104996751908.0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,694 | INFO     | sum of deviations: 54033512506.99999
[2025-11-24 11:18:47] 2025-11-24 17:18:06,694 | INFO     | mean x: 1763983434.0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,694 | INFO     | mean y: 2315904.100430416
[2025-11-24 11:18:47] 2025-11-24 17:18:06,694 | INFO     | intersect: -905466662.6088312
[2025-11-24 11:18:47] 2025-11-24 17:18:06,695 | INFO     | chi2: 2.5207403064321756
[2025-11-24 11:18:47] 2025-11-24 17:18:06,695 | INFO     | current chi2=2.5207403064321756 (change=0.07391905004802478 %)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,695 | INFO     | left removable region: 20
[2025-11-24 11:18:47] 2025-11-24 17:18:06,696 | INFO     | sum of square deviations: 95789423925.0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,704 | INFO     | sum of deviations: 214284265836.99997
[2025-11-24 11:18:47] 2025-11-24 17:18:06,704 | INFO     | mean x: 1763983403.5
[2025-11-24 11:18:47] 2025-11-24 17:18:06,704 | INFO     | mean y: 2327083.6863905326
[2025-11-24 11:18:47] 2025-11-24 17:18:06,704 | INFO     | intersect: -3943765011.6539774
[2025-11-24 11:18:47] 2025-11-24 17:18:06,705 | INFO     | chi2: 0.11016163692351652
[2025-11-24 11:18:47] 2025-11-24 17:18:06,705 | INFO     | current memory leak: 2.24 B/s (using 676 data points, chi2=0.11)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | could have reported an average CPU frequency of 3435 MHz (27 samples)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | ..............................
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | . Timing measurements:
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | . get job = 0 s
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | . initial setup = 3 s
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | . payload setup = 5 s
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | . stage-in = 0 s
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | . payload execution = 43078 s
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | . stage-out = 3 s
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | . log creation = 0 s
[2025-11-24 11:18:47] 2025-11-24 17:18:06,706 | INFO     | ..............................
[2025-11-24 11:18:47] 2025-11-24 17:18:06,784 | INFO     | 
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | job summary report
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | --------------------------------------------------
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | PanDA job id: 6894252925
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | task id: 47533967
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | errors: (none)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | pilot state: finished 
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | transexitcode: 0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | exeerrorcode: 0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | exeerrordiag: 
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | exitcode: 0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | exitmsg: OK
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | cpuconsumptiontime: 170068 s
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | nevents: 1000
[2025-11-24 11:18:47] 2025-11-24 17:18:06,785 | INFO     | neventsw: 0
[2025-11-24 11:18:47] 2025-11-24 17:18:06,786 | INFO     | pid: 149005
[2025-11-24 11:18:47] 2025-11-24 17:18:06,786 | INFO     | pgrp: 149005
[2025-11-24 11:18:47] 2025-11-24 17:18:06,786 | INFO     | corecount: 4
[2025-11-24 11:18:47] 2025-11-24 17:18:06,786 | INFO     | event service: False
[2025-11-24 11:18:47] 2025-11-24 17:18:06,786 | INFO     | sizes: {0: 2298803, 4: 2299065, 11: 2299093, 43087: 2344462, 43091: 2354243, 43094: 2354327, 43100: 2354701}
[2025-11-24 11:18:47] 2025-11-24 17:18:06,786 | INFO     | --------------------------------------------------
[2025-11-24 11:18:47] 2025-11-24 17:18:06,786 | INFO     | 
[2025-11-24 11:18:47] 2025-11-24 17:18:06,786 | INFO     | executing command: ls -lF /data/boinc/slots/11
[2025-11-24 11:18:47] 2025-11-24 17:18:06,807 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,807 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,807 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,807 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 11:18:47] 2025-11-24 17:18:06,808 | INFO     | job 6894252925 has completed (purged errors)
[2025-11-24 11:18:47] 2025-11-24 17:18:06,809 | INFO     | overall cleanup function is called
[2025-11-24 11:18:47] 2025-11-24 17:18:07,819 | INFO     | --- collectZombieJob: --- 10, [149005]
[2025-11-24 11:18:47] 2025-11-24 17:18:07,819 | INFO     | zombie collector waiting for pid 149005
[2025-11-24 11:18:47] 2025-11-24 17:18:07,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 11:18:47] 2025-11-24 17:18:07,820 | INFO     | collected zombie processes
[2025-11-24 11:18:47] 2025-11-24 17:18:07,820 | INFO     | will attempt to kill all subprocesses of pid=149005
[2025-11-24 11:18:47] 2025-11-24 17:18:07,912 | INFO     | process IDs to be killed: [149005] (in reverse order)
[2025-11-24 11:18:47] 2025-11-24 17:18:07,963 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 11:18:47] 2025-11-24 17:18:07,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 11:18:47] 2025-11-24 17:18:07,965 | INFO     | did not find any defunct processes belonging to 149005
[2025-11-24 11:18:47] 2025-11-24 17:18:07,967 | INFO     | did not find any defunct processes belonging to 149005
[2025-11-24 11:18:47] 2025-11-24 17:18:07,969 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 11:18:47] 2025-11-24 17:18:07,969 | INFO     | ready for new job
[2025-11-24 11:18:47] 2025-11-24 17:18:07,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 11:18:47] 2025-11-24 17:18:07,971 | INFO     | ***************************************
[2025-11-24 11:18:47] 2025-11-24 17:18:07,971 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 11:18:47] 2025-11-24 17:18:07,971 | INFO     | ***************************************
[2025-11-24 11:18:47] 2025-11-24 17:18:07,971 | INFO     | 
[2025-11-24 11:18:47] 2025-11-24 17:18:07,972 | INFO     | architecture information:
[2025-11-24 11:18:47] 2025-11-24 17:18:07,972 | INFO     | executing command: cat /etc/os-release
[2025-11-24 11:18:47] 2025-11-24 17:18:07,985 | INFO     | cat /etc/os-release:
[2025-11-24 11:18:47] NAME="CentOS Linux"
[2025-11-24 11:18:47] VERSION="7 (Core)"
[2025-11-24 11:18:47] ID="centos"
[2025-11-24 11:18:47] ID_LIKE="rhel fedora"
[2025-11-24 11:18:47] VERSION_ID="7"
[2025-11-24 11:18:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 11:18:47] ANSI_COLOR="0;31"
[2025-11-24 11:18:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 11:18:47] HOME_URL="https://www.centos.org/"
[2025-11-24 11:18:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 11:18:47] 
[2025-11-24 11:18:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 11:18:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 11:18:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 11:18:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 11:18:47] 
[2025-11-24 11:18:47] 2025-11-24 17:18:07,985 | INFO     | ***************************************
[2025-11-24 11:18:47] 2025-11-24 17:18:08,488 | INFO     | executing command: df -mP /data/boinc/slots/11
[2025-11-24 11:18:47] 2025-11-24 17:18:08,504 | INFO     | sufficient remaining disk space (407291035648 B)
[2025-11-24 11:18:47] 2025-11-24 17:18:08,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 11:18:47] 2025-11-24 17:18:08,505 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 11:18:47] 2025-11-24 17:18:08,505 | INFO     | update_server=False
[2025-11-24 11:18:47] 2025-11-24 17:18:08,505 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 11:18:47] 2025-11-24 17:18:08,505 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 11:18:47] 2025-11-24 17:18:08,505 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 11:18:47] 2025-11-24 17:18:08,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 11:18:47] 2025-11-24 17:18:08,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 11:18:47] 2025-11-24 17:18:08,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 11:18:47] 2025-11-24 17:18:08,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:18:47] 2025-11-24 17:18:09,084 | INFO     | all job control threads have been joined
[2025-11-24 11:18:47] 2025-11-24 17:18:09,162 | INFO     | all data control threads have been joined
[2025-11-24 11:18:47] 2025-11-24 17:18:09,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:18:47] 2025-11-24 17:18:09,224 | INFO     | aborting loop
[2025-11-24 11:18:47] 2025-11-24 17:18:09,474 | INFO     | all payload control threads have been joined
[2025-11-24 11:18:47] 2025-11-24 17:18:09,505 | INFO     | [job] retrieve thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:09,510 | INFO     | [job] queue monitor thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:09,632 | INFO     | [payload] validate_post thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:09,948 | INFO     | [payload] failed_post thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,024 | INFO     | [data] copytool_in thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,088 | INFO     | [job] control thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,159 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,167 | INFO     | [data] control thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,229 | INFO     | [job] job monitor thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,410 | INFO     | [job] validate thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,479 | INFO     | [payload] control thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,511 | INFO     | [data] copytool_out thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,745 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,839 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:10,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:11,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 11:18:47] 2025-11-24 17:18:15,634 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 11:18:47] 2025-11-24 17:18:40,913 | INFO     | [monitor] cgroup control has ended
[2025-11-24 11:18:47] 2025-11-24 17:18:42,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741430564672)>', '<ExcThread(monitor, started 139740653287168)>']
[2025-11-24 11:18:47] 2025-11-24 17:18:42,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 11:18:47] 2025-11-24 17:18:42,665 | INFO     | [monitor] control thread has ended
[2025-11-24 11:18:47] 2025-11-24 17:18:47,529 | INFO     | all workflow threads have been joined
[2025-11-24 11:18:47] 2025-11-24 17:18:47,529 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 11:18:47] 2025-11-24 17:18:47,530 | INFO     | traces error code: 0
[2025-11-24 11:18:47] 2025-11-24 17:18:47,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 11:18:47] 2025-11-24 17:18:47,641 [wrapper] ==== pilot stdout END ====
[2025-11-24 11:18:47] 2025-11-24 17:18:47,649 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 11:18:47] 2025-11-24 17:18:47,652 [wrapper] pilotpid: 142444
[2025-11-24 11:18:47] 2025-11-24 17:18:47,654 [wrapper] Pilot exit status: 0
[2025-11-24 11:18:47] 2025-11-24 17:18:47,664 [wrapper] pandaids: 6894252925
[2025-11-24 11:18:47] 2025-11-24 17:18:47,705 [wrapper] cleanup supervisor_pilot  231156 142445
[2025-11-24 11:18:47] 2025-11-24 17:18:47,708 [wrapper] Test setup, not cleaning
[2025-11-24 11:18:47] 2025-11-24 17:18:47,710 [wrapper] apfmon messages muted
[2025-11-24 11:18:47] 2025-11-24 17:18:47,712 [wrapper] ==== wrapper stdout END ====
[2025-11-24 11:18:47] 2025-11-24 17:18:47,714 [wrapper] ==== wrapper stderr END ====
[2025-11-24 11:18:47]  *** Error codes and diagnostics ***
[2025-11-24 11:18:47]     "exeErrorCode": 0,
[2025-11-24 11:18:47]     "exeErrorDiag": "",
[2025-11-24 11:18:47]     "pilotErrorCode": 0,
[2025-11-24 11:18:47]     "pilotErrorDiag": "",
[2025-11-24 11:18:47]  *** Listing of results directory ***
[2025-11-24 11:18:47] total 1308324
[2025-11-24 11:18:47] -rwx------ 1 boinc boinc     36292 Nov 20 20:10 runpilot2-wrapper.sh
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc      5112 Nov 20 20:10 queuedata.json
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc    576529 Nov 20 20:10 pilot3.tar.gz
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc       100 Nov 23 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 11:18:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 23:19 run_atlas
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc       105 Nov 23 23:19 job.xml
[2025-11-24 11:18:47] -rw-r--r-- 2 boinc boinc 411239637 Nov 23 23:19 EVNT.47493127._002119.pool.root.1
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc      9535 Nov 23 23:19 init_data.xml
[2025-11-24 11:18:47] drwxrwx--x 2 boinc boinc      4096 Nov 23 23:19 shared
[2025-11-24 11:18:47] -rw-r--r-- 2 boinc boinc    590090 Nov 23 23:19 input.tar.gz
[2025-11-24 11:18:47] -rw-r--r-- 2 boinc boinc     15847 Nov 23 23:19 start_atlas.sh
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc         0 Nov 23 23:19 boinc_lockfile
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc      2785 Nov 23 23:19 pandaJob.out
[2025-11-24 11:18:47] -rw------- 1 boinc boinc    989786 Nov 23 23:19 agis_schedconf.cvmfs.json
[2025-11-24 11:18:47] drwx------ 5 boinc boinc      4096 Nov 23 23:19 pilot3
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc       532 Nov 24 11:12 boinc_task_state.xml
[2025-11-24 11:18:47] -rw------- 1 boinc boinc 909617224 Nov 24 11:17 HITS.47533967._000910.pool.root.1
[2025-11-24 11:18:47] -rw------- 1 boinc boinc        95 Nov 24 11:17 pilot_heartbeat.json
[2025-11-24 11:18:47] -rw------- 1 boinc boinc      1038 Nov 24 11:17 memory_monitor_summary.json
[2025-11-24 11:18:47] -rw------- 1 boinc boinc   1516227 Nov 24 11:17 agis_ddmendpoints.agis.ALL.json
[2025-11-24 11:18:47] -rw------- 1 boinc boinc   1492481 Nov 24 11:17 log.47533967._000910.job.log.tgz.1
[2025-11-24 11:18:47] -rw------- 1 boinc boinc      8560 Nov 24 11:18 heartbeat.json
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc        29 Nov 24 11:18 wrapper_checkpoint.txt
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc      8192 Nov 24 11:18 boinc_mmap_file
[2025-11-24 11:18:47] -rw------- 1 boinc boinc      4551 Nov 24 11:18 pilotlog.txt
[2025-11-24 11:18:47] -rw------- 1 boinc boinc   5980018 Nov 24 11:18 log.47533967._000910.job.log.1
[2025-11-24 11:18:47] -rw------- 1 boinc boinc       353 Nov 24 11:18 output.list
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc       620 Nov 24 11:18 runtime_log
[2025-11-24 11:18:47] -rw------- 1 boinc boinc   7495680 Nov 24 11:18 result.tar.gz
[2025-11-24 11:18:47] -rw------- 1 boinc boinc       651 Nov 24 11:18 SQYKDmmmVg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhsIKDm725ymm.diag
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc      8747 Nov 24 11:18 runtime_log.err
[2025-11-24 11:18:47] -rw-r--r-- 1 boinc boinc     20855 Nov 24 11:18 stderr.txt
[2025-11-24 11:18:47] HITS file was successfully produced:
[2025-11-24 11:18:47] -rw------- 1 boinc boinc 909617224 Nov 24 11:17 shared/HITS.pool.root.1
[2025-11-24 11:18:47]  *** Contents of shared directory: ***
[2025-11-24 11:18:47] total 1297828
[2025-11-24 11:18:47] -rw-r--r-- 2 boinc boinc 411239637 Nov 23 23:19 ATLAS.root_0
[2025-11-24 11:18:47] -rw-r--r-- 2 boinc boinc    590090 Nov 23 23:19 input.tar.gz
[2025-11-24 11:18:47] -rw-r--r-- 2 boinc boinc     15847 Nov 23 23:19 start_atlas.sh
[2025-11-24 11:18:47] -rw------- 1 boinc boinc 909617224 Nov 24 11:17 HITS.pool.root.1
[2025-11-24 11:18:47] -rw------- 1 boinc boinc   7495680 Nov 24 11:18 result.tar.gz
11:18:48 (138618): run_atlas exited; CPU time 170170.477911
11:18:48 (138618): called boinc_finish(0)

</stderr_txt>
]]>

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