Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:23:14 (7939): wrapper (7.7.26015): starting
02:23:14 (7939): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 02:23:14] Arguments: --nthreads 8
[2025-11-26 02:23:14] Threads: 8
[2025-11-26 02:23:14] Checking for CVMFS
[2025-11-26 02:23:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 02:23:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 02:23:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 02:23:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 02:23:17] 2.11.2.0 9405 210692 136120 153304 3 75 24595327 25165825 1706 130560 10 90864812 99.882 44665168 2219 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 02:23:17] CVMFS is ok
[2025-11-26 02:23:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 02:23:17] Checking for apptainer binary...
[2025-11-26 02:23:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 02:23:17] Running /usr/bin/apptainer --version
[2025-11-26 02:23:17] apptainer version 1.3.2-1.el7
[2025-11-26 02:23:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 02:23:21] cg-vwn431.simple-grid.lan
[2025-11-26 02:23:21] apptainer works
[2025-11-26 02:23:21] Set ATHENA_PROC_NUMBER=8
[2025-11-26 02:23:21] Set ATHENA_CORE_NUMBER=8
[2025-11-26 02:23:21] Starting ATLAS job with PandaID=6895353371
[2025-11-26 02:23:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:38:06]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:38:06] 2025-11-27 00:37:07,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:38:06] 2025-11-27 00:37:08,753 | INFO     | time since job start (83378s) is within the limit (172800.0s)
[2025-11-27 01:38:06] 2025-11-27 00:37:09,653 | INFO     | monitor loop #5620: job 0:6895353371 is in state 'finished'
[2025-11-27 01:38:06] 2025-11-27 00:37:09,653 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:38:06] 2025-11-27 00:37:09,955 | INFO     | PID=11745 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:38:06] 2025-11-27 00:37:09,955 | INFO     | .. there are 9 such processes running
[2025-11-27 01:38:06] 2025-11-27 00:37:10,962 | INFO     | time since job start (83380s) is within the limit (172800.0s)
[2025-11-27 01:38:06] 2025-11-27 00:37:12,160 | INFO     | monitor loop #5621: job 0:6895353371 is in state 'finished'
[2025-11-27 01:38:06] 2025-11-27 00:37:12,160 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:38:06] 2025-11-27 00:37:12,969 | INFO     | time since job start (83382s) is within the limit (172800.0s)
[2025-11-27 01:38:06] 2025-11-27 00:37:14,668 | INFO     | monitor loop #5622: job 0:6895353371 is in state 'finished'
[2025-11-27 01:38:06] 2025-11-27 00:37:14,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:38:06] 2025-11-27 00:37:14,976 | INFO     | time since job start (83384s) is within the limit (172800.0s)
[2025-11-27 01:38:06] 2025-11-27 00:37:16,037 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 01:38:06] 2025-11-27 00:37:16,038 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 01:38:06] 2025-11-27 00:37:16,040 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6895353371/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:38:06] 2025-11-27 00:37:16,040 | INFO     | extracted standard info from prmon json
[2025-11-27 01:38:06] 2025-11-27 00:37:16,041 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:38:06] 2025-11-27 00:37:16,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:38:06] 2025-11-27 00:37:16,065 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:38:06] 2025-11-27 00:37:16,067 | INFO     | sum of square deviations: 774848897350.0663
[2025-11-27 01:38:06] 2025-11-27 00:37:16,128 | INFO     | sum of deviations: 2944356135444.4395
[2025-11-27 01:38:06] 2025-11-27 00:37:16,129 | INFO     | mean x: 1764162335.0714812
[2025-11-27 01:38:06] 2025-11-27 00:37:16,129 | INFO     | mean y: 2830549.7789240973
[2025-11-27 01:38:06] 2025-11-27 00:37:16,129 | INFO     | intersect: -6700827689.849415
[2025-11-27 01:38:06] 2025-11-27 00:37:16,130 | INFO     | chi2: 23.39888695291359
[2025-11-27 01:38:06] 2025-11-27 00:37:16,132 | INFO     | sum of square deviations: 766315822674.3043
[2025-11-27 01:38:06] 2025-11-27 00:37:16,192 | INFO     | sum of deviations: 3390202717738.9775
[2025-11-27 01:38:06] 2025-11-27 00:37:16,192 | INFO     | mean x: 1764162182.5754437
[2025-11-27 01:38:06] 2025-11-27 00:37:16,192 | INFO     | mean y: 2838516.7403846155
[2025-11-27 01:38:06] 2025-11-27 00:37:16,192 | INFO     | intersect: -7801864516.830609
[2025-11-27 01:38:06] 2025-11-27 00:37:16,199 | INFO     | chi2: 20.17724390527034
[2025-11-27 01:38:06] 2025-11-27 00:37:16,199 | INFO     | current chi2=20.17724390527034 (change=13.768360239212551 %)
[2025-11-27 01:38:06] 2025-11-27 00:37:16,199 | INFO     | right removable region: 1351
[2025-11-27 01:38:06] 2025-11-27 00:37:16,201 | INFO     | sum of square deviations: 766314935734.3036
[2025-11-27 01:38:06] 2025-11-27 00:37:16,271 | INFO     | sum of deviations: 2389804944863.142
[2025-11-27 01:38:06] 2025-11-27 00:37:16,271 | INFO     | mean x: 1764162487.5754437
[2025-11-27 01:38:06] 2025-11-27 00:37:16,271 | INFO     | mean y: 2840458.7877218933
[2025-11-27 01:38:06] 2025-11-27 00:37:16,272 | INFO     | intersect: -5498819550.370221
[2025-11-27 01:38:06] 2025-11-27 00:37:16,273 | INFO     | chi2: 18.91768542196797
[2025-11-27 01:38:06] 2025-11-27 00:37:16,273 | INFO     | current chi2=18.91768542196797 (change=19.151344847997684 %)
[2025-11-27 01:38:06] 2025-11-27 00:37:16,273 | INFO     | left removable region: 10
[2025-11-27 01:38:06] 2025-11-27 00:37:16,275 | INFO     | sum of square deviations: 747762311907.4775
[2025-11-27 01:38:06] 2025-11-27 00:37:16,332 | INFO     | sum of deviations: 2461828742906.49
[2025-11-27 01:38:06] 2025-11-27 00:37:16,332 | INFO     | mean x: 1764162457.0842655
[2025-11-27 01:38:06] 2025-11-27 00:37:16,332 | INFO     | mean y: 2858800.606263982
[2025-11-27 01:38:06] 2025-11-27 00:37:16,333 | INFO     | intersect: -5805224563.381142
[2025-11-27 01:38:06] 2025-11-27 00:37:16,334 | INFO     | chi2: 11.778880460524666
[2025-11-27 01:38:06] 2025-11-27 00:37:16,334 | INFO     | current memory leak: 3.29 B/s (using 1341 data points, chi2=11.78)
[2025-11-27 01:38:06] 2025-11-27 00:37:16,336 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-27 01:38:06] 2025-11-27 00:37:16,336 | INFO     | ..............................
[2025-11-27 01:38:06] 2025-11-27 00:37:16,336 | INFO     | . Timing measurements:
[2025-11-27 01:38:06] 2025-11-27 00:37:16,336 | INFO     | . get job = 0 s
[2025-11-27 01:38:06] 2025-11-27 00:37:16,336 | INFO     | . initial setup = 5 s
[2025-11-27 01:38:06] 2025-11-27 00:37:16,336 | INFO     | . payload setup = 166 s
[2025-11-27 01:38:06] 2025-11-27 00:37:16,336 | INFO     | . stage-in = 0 s
[2025-11-27 01:38:06] 2025-11-27 00:37:16,336 | INFO     | . payload execution = 82924 s
[2025-11-27 01:38:06] 2025-11-27 00:37:16,337 | INFO     | . stage-out = 5 s
[2025-11-27 01:38:06] 2025-11-27 00:37:16,337 | INFO     | . log creation = 2 s
[2025-11-27 01:38:06] 2025-11-27 00:37:16,337 | INFO     | ..............................
[2025-11-27 01:38:06] 2025-11-27 00:37:16,451 | INFO     | 
[2025-11-27 01:38:06] 2025-11-27 00:37:16,451 | INFO     | job summary report
[2025-11-27 01:38:06] 2025-11-27 00:37:16,451 | INFO     | --------------------------------------------------
[2025-11-27 01:38:06] 2025-11-27 00:37:16,451 | INFO     | PanDA job id: 6895353371
[2025-11-27 01:38:06] 2025-11-27 00:37:16,451 | INFO     | task id: 47556149
[2025-11-27 01:38:06] 2025-11-27 00:37:16,451 | INFO     | errors: (none)
[2025-11-27 01:38:06] 2025-11-27 00:37:16,451 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | pilot state: finished 
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | transexitcode: 0
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | exeerrorcode: 0
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | exeerrordiag: 
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | exitcode: 0
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | exitmsg: OK
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | cpuconsumptiontime: 311127 s
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | nevents: 1000
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | neventsw: 0
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | pid: 18368
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | pgrp: 18368
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | corecount: 8
[2025-11-27 01:38:06] 2025-11-27 00:37:16,452 | INFO     | event service: False
[2025-11-27 01:38:06] 2025-11-27 00:37:16,453 | INFO     | sizes: {0: 2283436, 1: 2284122, 2: 2284321, 13: 2284321, 24: 2284377, 34: 2284405, 45: 2284561, 56: 2284589, 67: 2284617, 78: 2284645, 88: 2284701, 97: 2285271, 99
[2025-11-27 01:38:06] 2025-11-27 00:37:16,453 | INFO     | --------------------------------------------------
[2025-11-27 01:38:06] 2025-11-27 00:37:16,453 | INFO     | 
[2025-11-27 01:38:06] 2025-11-27 00:37:16,453 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-11-27 01:38:06] 2025-11-27 00:37:16,990 | INFO     | time since job start (83386s) is within the limit (172800.0s)
[2025-11-27 01:38:06] 2025-11-27 00:37:17,064 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,066 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:38:06] 2025-11-27 00:37:17,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,066 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:38:06] 2025-11-27 00:37:17,066 | INFO     | job 6895353371 has completed (purged errors)
[2025-11-27 01:38:06] 2025-11-27 00:37:17,067 | INFO     | overall cleanup function is called
[2025-11-27 01:38:06] 2025-11-27 00:37:18,091 | INFO     | --- collectZombieJob: --- 10, [18368]
[2025-11-27 01:38:06] 2025-11-27 00:37:18,091 | INFO     | zombie collector waiting for pid 18368
[2025-11-27 01:38:06] 2025-11-27 00:37:18,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:38:06] 2025-11-27 00:37:18,091 | INFO     | collected zombie processes
[2025-11-27 01:38:06] 2025-11-27 00:37:18,091 | INFO     | will attempt to kill all subprocesses of pid=18368
[2025-11-27 01:38:06] 2025-11-27 00:37:18,219 | INFO     | process IDs to be killed: [18368] (in reverse order)
[2025-11-27 01:38:06] 2025-11-27 00:37:18,783 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:38:06] 2025-11-27 00:37:18,784 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:38:06] 2025-11-27 00:37:18,787 | INFO     | did not find any defunct processes belonging to 18368
[2025-11-27 01:38:06] 2025-11-27 00:37:18,790 | INFO     | did not find any defunct processes belonging to 18368
[2025-11-27 01:38:06] 2025-11-27 00:37:18,838 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:38:06] 2025-11-27 00:37:18,838 | INFO     | ready for new job
[2025-11-27 01:38:06] 2025-11-27 00:37:18,838 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:38:06] 2025-11-27 00:37:18,844 | INFO     | ***************************************
[2025-11-27 01:38:06] 2025-11-27 00:37:18,844 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:38:06] 2025-11-27 00:37:18,844 | INFO     | ***************************************
[2025-11-27 01:38:06] 2025-11-27 00:37:18,844 | INFO     | 
[2025-11-27 01:38:06] 2025-11-27 00:37:18,845 | INFO     | pilot is running in a VM
[2025-11-27 01:38:06] 2025-11-27 00:37:18,845 | INFO     | architecture information:
[2025-11-27 01:38:06] 2025-11-27 00:37:18,850 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:38:06] 2025-11-27 00:37:18,867 | INFO     | cat /etc/os-release:
[2025-11-27 01:38:06] NAME="CentOS Linux"
[2025-11-27 01:38:06] VERSION="7 (Core)"
[2025-11-27 01:38:06] ID="centos"
[2025-11-27 01:38:06] ID_LIKE="rhel fedora"
[2025-11-27 01:38:06] VERSION_ID="7"
[2025-11-27 01:38:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:38:06] ANSI_COLOR="0;31"
[2025-11-27 01:38:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:38:06] HOME_URL="https://www.centos.org/"
[2025-11-27 01:38:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:38:06] 
[2025-11-27 01:38:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:38:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:38:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:38:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:38:06] 
[2025-11-27 01:38:06] 2025-11-27 00:37:18,868 | INFO     | ***************************************
[2025-11-27 01:38:06] 2025-11-27 00:37:19,371 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-11-27 01:38:06] 2025-11-27 00:37:19,423 | INFO     | sufficient remaining disk space (495581134848 B)
[2025-11-27 01:38:06] 2025-11-27 00:37:19,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:38:06] 2025-11-27 00:37:19,424 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:38:06] 2025-11-27 00:37:19,424 | INFO     | update_server=False
[2025-11-27 01:38:06] 2025-11-27 00:37:19,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:38:06] 2025-11-27 00:37:19,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:38:06] 2025-11-27 00:37:19,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:38:06] 2025-11-27 00:37:19,687 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 01:38:06] 2025-11-27 00:37:19,687 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 01:38:06] 2025-11-27 00:37:19,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:38:06] 2025-11-27 00:37:19,687 | INFO     | will abort loop
[2025-11-27 01:38:06] 2025-11-27 00:37:20,203 | INFO     | all data control threads have been joined
[2025-11-27 01:38:06] 2025-11-27 00:37:20,385 | INFO     | all job control threads have been joined
[2025-11-27 01:38:06] 2025-11-27 00:37:20,430 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:20,441 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:20,538 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:20,693 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:20,727 | INFO     | all payload control threads have been joined
[2025-11-27 01:38:06] 2025-11-27 00:37:20,733 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:21,097 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:21,209 | INFO     | [data] control thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:21,390 | INFO     | [job] control thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:21,432 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:21,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:38:06] 2025-11-27 00:37:21,473 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:21,500 | INFO     | [job] validate thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:21,697 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:21,733 | INFO     | [payload] control thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:21,777 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:22,470 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:23,435 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:38:06] 2025-11-27 00:37:50,170 | INFO     | PID=11745 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:38:06] 2025-11-27 00:37:50,170 | INFO     | .. there are 9 such processes running
[2025-11-27 01:38:06] 2025-11-27 00:37:50,171 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:38:06] 2025-11-27 00:37:50,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:38:06] 2025-11-27 00:37:50,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:38:06] 2025-11-27 00:37:55,345 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:38:06] 2025-11-27 00:37:57,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016711415616)>', '<ExcThread(monitor, started 140016135173888)>']
[2025-11-27 01:38:06] 2025-11-27 00:37:58,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:38:06] 2025-11-27 00:37:58,219 | INFO     | [monitor] control thread has ended
[2025-11-27 01:38:06] 2025-11-27 00:38:02,261 | INFO     | all workflow threads have been joined
[2025-11-27 01:38:06] 2025-11-27 00:38:02,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:38:06] 2025-11-27 00:38:02,261 | INFO     | traces error code: 0
[2025-11-27 01:38:06] 2025-11-27 00:38:02,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:38:06] 2025-11-27 00:38:02,563 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:38:06] 2025-11-27 00:38:02,629 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:38:06] 2025-11-27 00:38:02,746 [wrapper] pilotpid: 11745
[2025-11-27 01:38:06] 2025-11-27 00:38:02,780 [wrapper] Pilot exit status: 0
[2025-11-27 01:38:06] 2025-11-27 00:38:03,116 [wrapper] pandaids: 6895353371
[2025-11-27 01:38:06] 2025-11-27 00:38:04,018 [wrapper] cleanup supervisor_pilot 30823 11746
[2025-11-27 01:38:06] 2025-11-27 00:38:04,120 [wrapper] Test setup, not cleaning
[2025-11-27 01:38:06] 2025-11-27 00:38:04,207 [wrapper] apfmon messages muted
[2025-11-27 01:38:06] 2025-11-27 00:38:04,273 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:38:06] 2025-11-27 00:38:04,367 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:38:06]  *** Error codes and diagnostics ***
[2025-11-27 01:38:06]     "exeErrorCode": 0,
[2025-11-27 01:38:06]     "exeErrorDiag": "",
[2025-11-27 01:38:06]     "pilotErrorCode": 0,
[2025-11-27 01:38:06]     "pilotErrorDiag": "",
[2025-11-27 01:38:06]  *** Listing of results directory ***
[2025-11-27 01:38:06] total 1322880
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc    576529 Nov 23 05:55 pilot3.tar.gz
[2025-11-27 01:38:06] -rwx------. 1 boinc boinc     36292 Nov 23 06:12 runpilot2-wrapper.sh
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc      5112 Nov 23 06:12 queuedata.json
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc       100 Nov 26 02:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:38:06] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 02:23 run_atlas
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc       105 Nov 26 02:23 job.xml
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc      6394 Nov 26 02:23 init_data.xml
[2025-11-27 01:38:06] -rw-r--r--. 2 boinc boinc 407678775 Nov 26 02:23 EVNT.47483658._001138.pool.root.1
[2025-11-27 01:38:06] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:23 start_atlas.sh
[2025-11-27 01:38:06] drwxrwx--x. 2 boinc boinc        68 Nov 26 02:23 shared
[2025-11-27 01:38:06] -rw-r--r--. 2 boinc boinc    590102 Nov 26 02:23 input.tar.gz
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc         0 Nov 26 02:23 boinc_lockfile
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc      2785 Nov 26 02:23 pandaJob.out
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc    991877 Nov 26 02:27 agis_schedconf.cvmfs.json
[2025-11-27 01:38:06] drwx------. 5 boinc boinc      4096 Nov 26 02:27 pilot3
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc       533 Nov 27 01:11 boinc_task_state.xml
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc 915931818 Nov 27 01:34 HITS.47556149._001245.pool.root.1
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc      1029 Nov 27 01:35 memory_monitor_summary.json
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc   1516240 Nov 27 01:35 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc   2442876 Nov 27 01:35 log.47556149._001245.job.log.tgz.1
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc      8627 Nov 27 01:37 heartbeat.json
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc        95 Nov 27 01:37 pilot_heartbeat.json
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc      8192 Nov 27 01:37 boinc_mmap_file
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc        29 Nov 27 01:37 wrapper_checkpoint.txt
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc      5071 Nov 27 01:38 pilotlog.txt
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc  11113395 Nov 27 01:38 log.47556149._001245.job.log.1
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc       353 Nov 27 01:38 output.list
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc       620 Nov 27 01:38 runtime_log
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc  13578240 Nov 27 01:38 result.tar.gz
[2025-11-27 01:38:06] -rw-------. 1 boinc boinc       662 Nov 27 01:38 v32KDmhZHh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpdKKDmWtyAcm.diag
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc      8833 Nov 27 01:38 runtime_log.err
[2025-11-27 01:38:06] -rw-r--r--. 1 boinc boinc     21493 Nov 27 01:38 stderr.txt
[2025-11-27 01:38:07] HITS file was successfully produced:
[2025-11-27 01:38:07] -rw-------. 1 boinc boinc 915931818 Nov 27 01:34 shared/HITS.pool.root.1
[2025-11-27 01:38:07]  *** Contents of shared directory: ***
[2025-11-27 01:38:07] total 1306448
[2025-11-27 01:38:07] -rw-r--r--. 2 boinc boinc 407678775 Nov 26 02:23 ATLAS.root_0
[2025-11-27 01:38:07] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:23 start_atlas.sh
[2025-11-27 01:38:07] -rw-r--r--. 2 boinc boinc    590102 Nov 26 02:23 input.tar.gz
[2025-11-27 01:38:07] -rw-------. 1 boinc boinc 915931818 Nov 27 01:34 HITS.pool.root.1
[2025-11-27 01:38:07] -rw-------. 1 boinc boinc  13578240 Nov 27 01:38 result.tar.gz
01:38:08 (7939): run_atlas exited; CPU time 311698.330077
01:38:08 (7939): called boinc_finish(0)

</stderr_txt>
]]>

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