Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:14:56 (1139264): wrapper (7.7.26015): starting
13:14:56 (1139264): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 13:14:56] Arguments: --nthreads 3
[2025-11-26 13:14:56] Threads: 3
[2025-11-26 13:14:56] Checking for CVMFS
[2025-11-26 13:14:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:14:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:14:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:14:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:14:56] 2.9.2.0 3836662 11252 94640 153321 0 81 34096430 36864001 0 130560 5 4193132 99.935 569836 511 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 13:14:56] CVMFS is ok
[2025-11-26 13:14:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:14:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:14:56] Further information can be found at the LHC@home message board.
[2025-11-26 13:14:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:14:56] Checking for apptainer binary...
[2025-11-26 13:14:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:14:56] Running /usr/bin/apptainer --version
[2025-11-26 13:14:56] apptainer version 1.4.1-1.1
[2025-11-26 13:14:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:14:56] thA327
[2025-11-26 13:14:56] apptainer works
[2025-11-26 13:14:56] Set ATHENA_PROC_NUMBER=3
[2025-11-26 13:14:56] Set ATHENA_CORE_NUMBER=3
[2025-11-26 13:14:56] Starting ATLAS job with PandaID=6891582242
[2025-11-26 13:14:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:17:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:17:40] 2025-11-26 20:17:02,748 | INFO     | update_server=False
[2025-11-26 21:17:40] 2025-11-26 20:17:02,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:17:40] 2025-11-26 20:17:02,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:17:40] 2025-11-26 20:17:02,764 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 21:17:40] 2025-11-26 20:17:02,764 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 21:17:40] 2025-11-26 20:17:02,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:17:40] 2025-11-26 20:17:02,764 | INFO     | will abort loop
[2025-11-26 21:17:40] 2025-11-26 20:17:03,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:17:40] 2025-11-26 20:17:03,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:17:40] 2025-11-26 20:17:03,657 | INFO     | all data control threads have been joined
[2025-11-26 21:17:40] 2025-11-26 20:17:03,754 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:03,754 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:03,769 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:03,852 | INFO     | all payload control threads have been joined
[2025-11-26 21:17:40] 2025-11-26 20:17:03,946 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:03,984 | INFO     | all job control threads have been joined
[2025-11-26 21:17:40] 2025-11-26 20:17:04,238 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:04,462 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:04,663 | INFO     | [data] control thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:04,815 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:04,858 | INFO     | [payload] control thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:04,990 | INFO     | [job] control thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:05,077 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:05,078 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:05,095 | INFO     | [job] validate thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:05,244 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:07,226 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:13,098 | INFO     | job.realtimelogging is not enabled
[2025-11-26 21:17:40] 2025-11-26 20:17:14,104 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:17:40] 2025-11-26 20:17:33,556 | INFO     | PID=1142980 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:17:40] 2025-11-26 20:17:33,557 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:17:40] 2025-11-26 20:17:33,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:17:40] 2025-11-26 20:17:33,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:17:40] 2025-11-26 20:17:34,235 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:17:40] 2025-11-26 20:17:35,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139853655254848)>', '<ExcThread(monitor, started 139853169673984)>']
[2025-11-26 21:17:40] 2025-11-26 20:17:35,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:17:40] 2025-11-26 20:17:35,568 | INFO     | [monitor] control thread has ended
[2025-11-26 21:17:40] 2025-11-26 20:17:40,398 | INFO     | all workflow threads have been joined
[2025-11-26 21:17:40] 2025-11-26 20:17:40,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:17:40] 2025-11-26 20:17:40,399 | INFO     | traces error code: 0
[2025-11-26 21:17:40] 2025-11-26 20:17:40,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:17:40] 2025-11-26 20:17:40,448 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:17:40] 2025-11-26 20:17:40,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:17:40] 2025-11-26 20:17:40,452 [wrapper] pilotpid: 1142980
[2025-11-26 21:17:40] 2025-11-26 20:17:40,455 [wrapper] Pilot exit status: 0
[2025-11-26 21:17:40] 2025-11-26 20:17:40,462 [wrapper] pandaids: 6891582242
[2025-11-26 21:17:40] 2025-11-26 20:17:40,478 [wrapper] cleanup supervisor_pilot 1200160 1142981
[2025-11-26 21:17:40] 2025-11-26 20:17:40,480 [wrapper] Test setup, not cleaning
[2025-11-26 21:17:40] 2025-11-26 20:17:40,482 [wrapper] apfmon messages muted
[2025-11-26 21:17:40] 2025-11-26 20:17:40,485 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:17:40] 2025-11-26 20:17:40,487 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:17:40]  *** Error codes and diagnostics ***
[2025-11-26 21:17:40]     "exeErrorCode": 0,
[2025-11-26 21:17:40]     "exeErrorDiag": "",
[2025-11-26 21:17:40]     "pilotErrorCode": 0,
[2025-11-26 21:17:40]     "pilotErrorDiag": "",
[2025-11-26 21:17:40]  *** Listing of results directory ***
[2025-11-26 21:17:40] total 1310148
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-26 21:17:40] -rwx------ 1 boinc boinc     36292 Nov 18 18:02 runpilot2-wrapper.sh
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:02 queuedata.json
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc       100 Nov 26 13:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:17:40] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 13:14 run_atlas
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc       105 Nov 26 13:14 job.xml
[2025-11-26 21:17:40] -rw-r--r-- 2 boinc boinc 409909784 Nov 26 13:14 EVNT.47493065._000427.pool.root.1
[2025-11-26 21:17:40] drwxrwx--x 2 boinc boinc      4096 Nov 26 13:14 shared
[2025-11-26 21:17:40] -rw-r--r-- 2 boinc boinc    590100 Nov 26 13:14 input.tar.gz
[2025-11-26 21:17:40] -rw-r--r-- 2 boinc boinc     15120 Nov 26 13:14 start_atlas.sh
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc         0 Nov 26 13:14 boinc_setup_complete
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc      6447 Nov 26 13:14 init_data.xml
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc         0 Nov 26 13:14 boinc_lockfile
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc      2770 Nov 26 13:14 pandaJob.out
[2025-11-26 21:17:40] -rw------- 1 boinc boinc    991830 Nov 26 13:15 agis_schedconf.cvmfs.json
[2025-11-26 21:17:40] drwx------ 5 boinc boinc      4096 Nov 26 13:15 pilot3
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc       531 Nov 26 21:13 boinc_task_state.xml
[2025-11-26 21:17:40] -rw------- 1 boinc boinc 917334422 Nov 26 21:16 HITS.47493068._004261.pool.root.1
[2025-11-26 21:17:40] -rw------- 1 boinc boinc      1022 Nov 26 21:16 memory_monitor_summary.json
[2025-11-26 21:17:40] -rw------- 1 boinc boinc   1516240 Nov 26 21:16 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:17:40] -rw------- 1 boinc boinc   1159302 Nov 26 21:16 log.47493068._004261.job.log.tgz.1
[2025-11-26 21:17:40] -rw------- 1 boinc boinc      8555 Nov 26 21:17 heartbeat.json
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc      8192 Nov 26 21:17 boinc_mmap_file
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc        28 Nov 26 21:17 wrapper_checkpoint.txt
[2025-11-26 21:17:40] -rw------- 1 boinc boinc        95 Nov 26 21:17 pilot_heartbeat.json
[2025-11-26 21:17:40] -rw------- 1 boinc boinc      5010 Nov 26 21:17 pilotlog.txt
[2025-11-26 21:17:40] -rw------- 1 boinc boinc   4066639 Nov 26 21:17 log.47493068._004261.job.log.1
[2025-11-26 21:17:40] -rw------- 1 boinc boinc       353 Nov 26 21:17 output.list
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc       620 Nov 26 21:17 runtime_log
[2025-11-26 21:17:40] -rw------- 1 boinc boinc   5242880 Nov 26 21:17 result.tar.gz
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc      8778 Nov 26 21:17 runtime_log.err
[2025-11-26 21:17:40] -rw------- 1 boinc boinc       665 Nov 26 21:17 qZKNDm6Gef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxwFKDmLFYFxm.diag
[2025-11-26 21:17:40] -rw-r--r-- 1 boinc boinc      7739 Nov 26 21:17 stderr.txt
[2025-11-26 21:17:40] HITS file was successfully produced:
[2025-11-26 21:17:40] -rw------- 1 boinc boinc 917334422 Nov 26 21:16 shared/HITS.pool.root.1
[2025-11-26 21:17:40]  *** Contents of shared directory: ***
[2025-11-26 21:17:40] total 1301860
[2025-11-26 21:17:40] -rw-r--r-- 2 boinc boinc 409909784 Nov 26 13:14 ATLAS.root_0
[2025-11-26 21:17:40] -rw-r--r-- 2 boinc boinc    590100 Nov 26 13:14 input.tar.gz
[2025-11-26 21:17:40] -rw-r--r-- 2 boinc boinc     15120 Nov 26 13:14 start_atlas.sh
[2025-11-26 21:17:40] -rw------- 1 boinc boinc 917334422 Nov 26 21:16 HITS.pool.root.1
[2025-11-26 21:17:40] -rw------- 1 boinc boinc   5242880 Nov 26 21:17 result.tar.gz
21:17:42 (1139264): run_atlas exited; CPU time 85392.330662
21:17:42 (1139264): called boinc_finish(0)

</stderr_txt>
]]>

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