Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:57:58 (125488): wrapper (7.7.26015): starting
09:57:58 (125488): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 09:57:58] Arguments: --nthreads 8
[2025-11-23 09:57:58] Threads: 8
[2025-11-23 09:57:58] Checking for CVMFS
[2025-11-23 09:57:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 09:57:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 09:57:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 09:57:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 09:57:59] 2.13.2.0 7528 28740 174332 153211 3 538 38775769 40960000 20555 16776704 0 58269665 99.786 32134369 41372 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 09:57:59] CVMFS is ok
[2025-11-23 09:57:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 09:57:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 09:57:59] Further information can be found at the LHC@home message board.
[2025-11-23 09:57:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 09:57:59] Checking for apptainer binary...
[2025-11-23 09:57:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 09:57:59] Running /usr/bin/apptainer --version
[2025-11-23 09:57:59] apptainer version 1.4.4-1.el9
[2025-11-23 09:57:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 09:57:59] c-212-9.aglt2.org
[2025-11-23 09:57:59] apptainer works
[2025-11-23 09:57:59] Set ATHENA_PROC_NUMBER=8
[2025-11-23 09:57:59] Set ATHENA_CORE_NUMBER=8
[2025-11-23 09:57:59] Starting ATLAS job with PandaID=6893874623
[2025-11-23 09:57:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:54:49]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:54:49] 2025-11-24 04:53:54,147 | INFO     | job 6893874623 has state=finished
[2025-11-23 23:54:49] 2025-11-24 04:53:54,147 | INFO     | preparing for final server update for job 6893874623 in state='finished'
[2025-11-23 23:54:49] 2025-11-24 04:53:54,147 | INFO     | this job has now completed (state=finished)
[2025-11-23 23:54:49] 2025-11-24 04:53:54,147 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-23 23:54:49] 2025-11-24 04:53:54,147 | INFO     | log transfer has been attempted: DONE
[2025-11-23 23:54:49] 2025-11-24 04:53:54,148 | INFO     | job 6893874623 has finished - writing final server update
[2025-11-23 23:54:49] 2025-11-24 04:53:54,148 | INFO     | total number of processed events: 1000 (read)
[2025-11-23 23:54:49] 2025-11-24 04:53:54,163 | INFO     | executing command: lscpu
[2025-11-23 23:54:49] 2025-11-24 04:53:54,242 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-23 23:54:49] 2025-11-24 04:53:54,755 | INFO     | time since job start (50139s) is within the limit (172800.0s)
[2025-11-23 23:54:49] 2025-11-24 04:53:56,454 | INFO     | monitor loop #3303: job 0:6893874623 is in state 'finished'
[2025-11-23 23:54:49] 2025-11-24 04:53:56,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:54:49] 2025-11-24 04:53:56,768 | INFO     | time since job start (50141s) is within the limit (172800.0s)
[2025-11-23 23:54:49] 2025-11-24 04:53:58,776 | INFO     | time since job start (50143s) is within the limit (172800.0s)
[2025-11-23 23:54:49] 2025-11-24 04:53:58,958 | INFO     | monitor loop #3304: job 0:6893874623 is in state 'finished'
[2025-11-23 23:54:49] 2025-11-24 04:53:58,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:54:49] 2025-11-24 04:54:00,719 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 23:54:49] 2025-11-24 04:54:00,725 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2921.7994479166664
[2025-11-23 23:54:49] 2025-11-24 04:54:00,751 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893874623/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 23:54:49] 2025-11-24 04:54:00,752 | INFO     | extracted standard info from prmon json
[2025-11-23 23:54:49] 2025-11-24 04:54:00,752 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 23:54:49] 2025-11-24 04:54:00,752 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 23:54:49] 2025-11-24 04:54:00,764 | INFO     | fitting pss+swap vs Time
[2025-11-23 23:54:49] 2025-11-24 04:54:00,766 | INFO     | sum of square deviations: 172221349259.14868
[2025-11-23 23:54:49] 2025-11-24 04:54:00,785 | INFO     | sum of deviations: 685032702063.2515
[2025-11-23 23:54:49] 2025-11-24 04:54:00,786 | INFO     | mean x: 1763934974.812652
[2025-11-23 23:54:49] 2025-11-24 04:54:00,786 | INFO     | mean y: 2857925.49513382
[2025-11-23 23:54:49] 2025-11-24 04:54:00,786 | INFO     | intersect: -7013421689.41791
[2025-11-23 23:54:49] 2025-11-24 04:54:00,787 | INFO     | chi2: 18.545110029858993
[2025-11-23 23:54:49] 2025-11-24 04:54:00,788 | INFO     | sum of square deviations: 169097982567.9805
[2025-11-23 23:54:49] 2025-11-24 04:54:00,786 | INFO     | time since job start (50145s) is within the limit (172800.0s)
[2025-11-23 23:54:49] 2025-11-24 04:54:00,805 | INFO     | sum of deviations: 957837851756.5725
[2025-11-23 23:54:49] 2025-11-24 04:54:00,805 | INFO     | mean x: 1763934822.3206854
[2025-11-23 23:54:49] 2025-11-24 04:54:00,805 | INFO     | mean y: 2871241.1199510405
[2025-11-23 23:54:49] 2025-11-24 04:54:00,805 | INFO     | intersect: -9988753231.224188
[2025-11-23 23:54:49] 2025-11-24 04:54:00,806 | INFO     | chi2: 15.111966858581612
[2025-11-23 23:54:49] 2025-11-24 04:54:00,806 | INFO     | current chi2=15.111966858581612 (change=18.512390413158876 %)
[2025-11-23 23:54:49] 2025-11-24 04:54:00,806 | INFO     | right removable region: 816
[2025-11-23 23:54:49] 2025-11-24 04:54:00,807 | INFO     | sum of square deviations: 169097324377.98065
[2025-11-23 23:54:49] 2025-11-24 04:54:00,822 | INFO     | sum of deviations: 392814569779.20593
[2025-11-23 23:54:49] 2025-11-24 04:54:00,823 | INFO     | mean x: 1763935127.3206854
[2025-11-23 23:54:49] 2025-11-24 04:54:00,823 | INFO     | mean y: 2872186.6328029376
[2025-11-23 23:54:49] 2025-11-24 04:54:00,823 | INFO     | intersect: -4094764607.4780045
[2025-11-23 23:54:49] 2025-11-24 04:54:00,824 | INFO     | chi2: 15.387806030249711
[2025-11-23 23:54:49] 2025-11-24 04:54:00,824 | INFO     | current chi2=15.387806030249711 (change=17.02499469955039 %)
[2025-11-23 23:54:49] 2025-11-24 04:54:00,824 | INFO     | left removable region: 10
[2025-11-23 23:54:49] 2025-11-24 04:54:00,825 | INFO     | sum of square deviations: 162358793594.38235
[2025-11-23 23:54:49] 2025-11-24 04:54:00,840 | INFO     | sum of deviations: 624137448411.6892
[2025-11-23 23:54:49] 2025-11-24 04:54:00,840 | INFO     | mean x: 1763935096.8362284
[2025-11-23 23:54:49] 2025-11-24 04:54:00,840 | INFO     | mean y: 2892866.490074442
[2025-11-23 23:54:49] 2025-11-24 04:54:00,840 | INFO     | intersect: -6778002249.382985
[2025-11-23 23:54:49] 2025-11-24 04:54:00,841 | INFO     | chi2: 10.982471752227534
[2025-11-23 23:54:49] 2025-11-24 04:54:00,842 | INFO     | current memory leak: 3.84 B/s (using 806 data points, chi2=10.98)
[2025-11-23 23:54:49] 2025-11-24 04:54:00,843 | INFO     | could have reported an average CPU frequency of 2995 MHz (31 samples)
[2025-11-23 23:54:49] 2025-11-24 04:54:00,844 | INFO     | ..............................
[2025-11-23 23:54:49] 2025-11-24 04:54:00,844 | INFO     | . Timing measurements:
[2025-11-23 23:54:49] 2025-11-24 04:54:00,844 | INFO     | . get job = 0 s
[2025-11-23 23:54:49] 2025-11-24 04:54:00,844 | INFO     | . initial setup = 2 s
[2025-11-23 23:54:49] 2025-11-24 04:54:00,844 | INFO     | . payload setup = 12 s
[2025-11-23 23:54:49] 2025-11-24 04:54:00,844 | INFO     | . stage-in = 0 s
[2025-11-23 23:54:49] 2025-11-24 04:54:00,844 | INFO     | . payload execution = 50095 s
[2025-11-23 23:54:49] 2025-11-24 04:54:00,844 | INFO     | . stage-out = 4 s
[2025-11-23 23:54:49] 2025-11-24 04:54:00,844 | INFO     | . log creation = 0 s
[2025-11-23 23:54:49] 2025-11-24 04:54:00,844 | INFO     | ..............................
[2025-11-23 23:54:49] 2025-11-24 04:54:00,935 | INFO     | 
[2025-11-23 23:54:49] 2025-11-24 04:54:00,935 | INFO     | job summary report
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | --------------------------------------------------
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | PanDA job id: 6893874623
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | task id: 47523449
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | errors: (none)
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | pilot state: finished 
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | transexitcode: 0
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | exeerrorcode: 0
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | exeerrordiag: 
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | exitcode: 0
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | exitmsg: OK
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | cpuconsumptiontime: 213070 s
[2025-11-23 23:54:49] 2025-11-24 04:54:00,936 | INFO     | nevents: 1000
[2025-11-23 23:54:49] 2025-11-24 04:54:00,937 | INFO     | neventsw: 0
[2025-11-23 23:54:49] 2025-11-24 04:54:00,937 | INFO     | pid: 144461
[2025-11-23 23:54:49] 2025-11-24 04:54:00,937 | INFO     | pgrp: 144461
[2025-11-23 23:54:49] 2025-11-24 04:54:00,937 | INFO     | corecount: 8
[2025-11-23 23:54:49] 2025-11-24 04:54:00,937 | INFO     | event service: False
[2025-11-23 23:54:49] 2025-11-24 04:54:00,937 | INFO     | sizes: {0: 2297978, 1: 2298834, 7: 2299096, 12: 2299124, 50112: 2347871, 50113: 2347870, 50117: 2357048, 50119: 2357104, 50127: 2357350}
[2025-11-23 23:54:49] 2025-11-24 04:54:00,937 | INFO     | --------------------------------------------------
[2025-11-23 23:54:49] 2025-11-24 04:54:00,937 | INFO     | 
[2025-11-23 23:54:49] 2025-11-24 04:54:00,937 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 23:54:49] 2025-11-24 04:54:00,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 23:54:49] 2025-11-24 04:54:00,973 | INFO     | job 6893874623 has completed (purged errors)
[2025-11-23 23:54:49] 2025-11-24 04:54:00,973 | INFO     | overall cleanup function is called
[2025-11-23 23:54:49] 2025-11-24 04:54:01,991 | INFO     | --- collectZombieJob: --- 10, [144461]
[2025-11-23 23:54:49] 2025-11-24 04:54:01,991 | INFO     | zombie collector waiting for pid 144461
[2025-11-23 23:54:49] 2025-11-24 04:54:01,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 23:54:49] 2025-11-24 04:54:01,992 | INFO     | collected zombie processes
[2025-11-23 23:54:49] 2025-11-24 04:54:01,992 | INFO     | will attempt to kill all subprocesses of pid=144461
[2025-11-23 23:54:49] 2025-11-24 04:54:02,377 | INFO     | process IDs to be killed: [144461] (in reverse order)
[2025-11-23 23:54:49] 2025-11-24 04:54:02,519 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 23:54:49] 2025-11-24 04:54:02,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 23:54:49] 2025-11-24 04:54:02,536 | INFO     | did not find any defunct processes belonging to 144461
[2025-11-23 23:54:49] 2025-11-24 04:54:02,554 | INFO     | did not find any defunct processes belonging to 144461
[2025-11-23 23:54:49] 2025-11-24 04:54:02,556 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 23:54:49] 2025-11-24 04:54:02,556 | INFO     | ready for new job
[2025-11-23 23:54:49] 2025-11-24 04:54:02,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 23:54:49] 2025-11-24 04:54:02,561 | INFO     | ***************************************
[2025-11-23 23:54:49] 2025-11-24 04:54:02,561 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 23:54:49] 2025-11-24 04:54:02,561 | INFO     | ***************************************
[2025-11-23 23:54:49] 2025-11-24 04:54:02,561 | INFO     | 
[2025-11-23 23:54:49] 2025-11-24 04:54:02,567 | INFO     | architecture information:
[2025-11-23 23:54:49] 2025-11-24 04:54:02,568 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:54:49] 2025-11-24 04:54:02,587 | INFO     | cat /etc/os-release:
[2025-11-23 23:54:49] NAME="CentOS Linux"
[2025-11-23 23:54:49] VERSION="7 (Core)"
[2025-11-23 23:54:49] ID="centos"
[2025-11-23 23:54:49] ID_LIKE="rhel fedora"
[2025-11-23 23:54:49] VERSION_ID="7"
[2025-11-23 23:54:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:54:49] ANSI_COLOR="0;31"
[2025-11-23 23:54:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:54:49] HOME_URL="https://www.centos.org/"
[2025-11-23 23:54:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:54:49] 
[2025-11-23 23:54:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:54:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:54:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:54:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:54:49] 
[2025-11-23 23:54:49] 2025-11-24 04:54:02,587 | INFO     | ***************************************
[2025-11-23 23:54:49] 2025-11-24 04:54:03,090 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 23:54:49] 2025-11-24 04:54:03,106 | INFO     | sufficient remaining disk space (123082899456 B)
[2025-11-23 23:54:49] 2025-11-24 04:54:03,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:54:49] 2025-11-24 04:54:03,106 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:54:49] 2025-11-24 04:54:03,106 | INFO     | update_server=False
[2025-11-23 23:54:49] 2025-11-24 04:54:03,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:54:49] 2025-11-24 04:54:03,106 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:54:49] 2025-11-24 04:54:03,106 | INFO     | aborting loop
[2025-11-23 23:54:49] 2025-11-24 04:54:03,306 | INFO     | all data control threads have been joined
[2025-11-23 23:54:49] 2025-11-24 04:54:03,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:54:49] 2025-11-24 04:54:03,932 | INFO     | all job control threads have been joined
[2025-11-23 23:54:49] 2025-11-24 04:54:04,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:54:49] 2025-11-24 04:54:04,112 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:04,112 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:04,176 | INFO     | [job] validate thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:04,312 | INFO     | [data] control thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:04,403 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:04,435 | INFO     | all payload control threads have been joined
[2025-11-23 23:54:49] 2025-11-24 04:54:04,939 | INFO     | [job] control thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:04,970 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:05,028 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:05,340 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:05,440 | INFO     | [payload] control thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:05,473 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:05,622 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:05,684 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:05,955 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:54:49] 2025-11-24 04:54:06,047 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:06,961 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:07,878 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:54:49] 2025-11-24 04:54:34,294 | INFO     | PID=136273 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 23:54:49] 2025-11-24 04:54:34,294 | INFO     | .. there are 17 such processes running
[2025-11-23 23:54:49] 2025-11-24 04:54:34,295 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:54:49] 2025-11-24 04:54:34,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:54:49] 2025-11-24 04:54:34,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:54:49] 2025-11-24 04:54:42,645 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:54:49] 2025-11-24 04:54:44,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595807381312)>', '<ExcThread(monitor, started 140595301422848)>']
[2025-11-23 23:54:49] 2025-11-24 04:54:44,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:54:49] 2025-11-24 04:54:44,343 | INFO     | [monitor] control thread has ended
[2025-11-23 23:54:49] 2025-11-24 04:54:49,316 | INFO     | all workflow threads have been joined
[2025-11-23 23:54:49] 2025-11-24 04:54:49,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:54:49] 2025-11-24 04:54:49,316 | INFO     | traces error code: 0
[2025-11-23 23:54:49] 2025-11-24 04:54:49,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:54:49] 2025-11-24 04:54:49,510 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:54:49] 2025-11-24 04:54:49,513 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:54:49] 2025-11-24 04:54:49,517 [wrapper] pilotpid: 136273
[2025-11-23 23:54:49] 2025-11-24 04:54:49,521 [wrapper] Pilot exit status: 0
[2025-11-23 23:54:49] 2025-11-24 04:54:49,537 [wrapper] pandaids: 6893874623
[2025-11-23 23:54:49] 2025-11-24 04:54:49,631 [wrapper] cleanup supervisor_pilot 1784783 136274
[2025-11-23 23:54:49] 2025-11-24 04:54:49,639 [wrapper] Test setup, not cleaning
[2025-11-23 23:54:49] 2025-11-24 04:54:49,642 [wrapper] apfmon messages muted
[2025-11-23 23:54:49] 2025-11-24 04:54:49,645 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:54:49] 2025-11-24 04:54:49,647 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:54:49]  *** Error codes and diagnostics ***
[2025-11-23 23:54:49]     "exeErrorCode": 0,
[2025-11-23 23:54:49]     "exeErrorDiag": "",
[2025-11-23 23:54:49]     "pilotErrorCode": 0,
[2025-11-23 23:54:49]     "pilotErrorDiag": "",
[2025-11-23 23:54:49]  *** Listing of results directory ***
[2025-11-23 23:54:49] total 1328888
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 11:08 pilot3.tar.gz
[2025-11-23 23:54:49] -rwx------. 1 boincer umatlas     36292 Nov 20 11:16 runpilot2-wrapper.sh
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 11:16 queuedata.json
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas       100 Nov 23 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:54:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 09:57 run_atlas
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas       105 Nov 23 09:57 job.xml
[2025-11-23 23:54:49] -rw-r--r--. 2 boincer umatlas 411865293 Nov 23 09:57 EVNT.47493127._000728.pool.root.1
[2025-11-23 23:54:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 09:57 start_atlas.sh
[2025-11-23 23:54:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 09:57 shared
[2025-11-23 23:54:49] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 09:57 input.tar.gz
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas         0 Nov 23 09:57 boinc_lockfile
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 09:57 pandaJob.out
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas        57 Nov 23 09:57 setup.sh.local
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas    989785 Nov 23 09:58 agis_schedconf.cvmfs.json
[2025-11-23 23:54:49] drwx------. 5 boincer umatlas      4096 Nov 23 09:58 pilot3
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas       533 Nov 23 23:28 boinc_task_state.xml
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas      6950 Nov 23 23:47 init_data.xml
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas 927456651 Nov 23 23:52 HITS.47523449._007276.pool.root.1
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas      1061 Nov 23 23:53 memory_monitor_summary.json
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas   1526164 Nov 23 23:53 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas   2042321 Nov 23 23:53 log.47523449._007276.job.log.tgz.1
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas      8607 Nov 23 23:54 heartbeat.json
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas        95 Nov 23 23:54 pilot_heartbeat.json
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 23:54 boinc_mmap_file
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas        29 Nov 23 23:54 wrapper_checkpoint.txt
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas      4824 Nov 23 23:54 pilotlog.txt
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas   6722113 Nov 23 23:54 log.47523449._007276.job.log.1
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas       353 Nov 23 23:54 output.list
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas       620 Nov 23 23:54 runtime_log
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas   8785920 Nov 23 23:54 result.tar.gz
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas      9338 Nov 23 23:54 runtime_log.err
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas       663 Nov 23 23:54 qgxNDmmVMg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7HIKDmLpPKBn.diag
[2025-11-23 23:54:49] -rw-r--r--. 1 boincer umatlas     21730 Nov 23 23:54 stderr.txt
[2025-11-23 23:54:49] HITS file was successfully produced:
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas 927456651 Nov 23 23:52 shared/HITS.pool.root.1
[2025-11-23 23:54:49]  *** Contents of shared directory: ***
[2025-11-23 23:54:49] total 1317120
[2025-11-23 23:54:49] -rw-r--r--. 2 boincer umatlas 411865293 Nov 23 09:57 ATLAS.root_0
[2025-11-23 23:54:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 09:57 start_atlas.sh
[2025-11-23 23:54:49] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 09:57 input.tar.gz
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas 927456651 Nov 23 23:52 HITS.pool.root.1
[2025-11-23 23:54:49] -rw-------. 1 boincer umatlas   8785920 Nov 23 23:54 result.tar.gz
23:54:50 (125488): run_atlas exited; CPU time 212821.213399
23:54:50 (125488): called boinc_finish(0)

</stderr_txt>
]]>

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