Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-23 16:21:38 (140052): vboxwrapper version 26210
2025-11-23 16:21:38 (140052): BOINC client version: 8.2.4
2025-11-23 16:21:38 (140052): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-11-23 16:21:38 (140052): Successfully copied 'init_data.xml' to the shared directory.
2025-11-23 16:21:38 (140052): Create VM. (boinc_0073b521d438dd0c, slot#2)
2025-11-23 16:21:38 (140052): Setting Memory Size for VM. (4800MB)
2025-11-23 16:21:38 (140052): Setting CPU Count for VM. (8)
2025-11-23 16:21:38 (140052): Setting Chipset Options for VM.
2025-11-23 16:21:38 (140052): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-23 16:21:38 (140052): Setting Boot Options for VM.
2025-11-23 16:21:39 (140052): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-23 16:21:39 (140052): Enabling VM Network Access.
2025-11-23 16:21:39 (140052): Disabling USB Support for VM.
2025-11-23 16:21:39 (140052): Disabling COM Port Support for VM.
2025-11-23 16:21:39 (140052): Disabling LPT Port Support for VM.
2025-11-23 16:21:39 (140052): Disabling Audio Support for VM.
2025-11-23 16:21:39 (140052): Disabling Clipboard Support for VM.
2025-11-23 16:21:39 (140052): Disabling Drag and Drop Support for VM.
2025-11-23 16:21:39 (140052): Adding storage controller(s) to VM.
2025-11-23 16:21:39 (140052): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-23 16:21:39 (140052): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-23 16:21:40 (140052): forwarding host port 48029 to guest port 80
2025-11-23 16:21:40 (140052): Enabling remote desktop for VM.
2025-11-23 16:21:40 (140052): Enabling shared directory for VM.
2025-11-23 16:21:40 (140052): Starting VM using VBoxManage interface. (boinc_0073b521d438dd0c, slot#2)
2025-11-23 16:21:41 (140052): Successfully started VM. (PID = '140485')
2025-11-23 16:21:41 (140052): Reporting VM Process ID to BOINC.
2025-11-23 16:21:41 (140052): Guest Log: BIOS: VirtualBox 6.1.50
2025-11-23 16:21:41 (140052): Guest Log: CPUID EDX: 0x178bfbff
2025-11-23 16:21:41 (140052): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-23 16:21:41 (140052): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-23 16:21:41 (140052): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-23 16:21:41 (140052): Detected: Web Application Enabled (http://localhost:48029)
2025-11-23 16:21:41 (140052): Detected: Remote Desktop Enabled (localhost:39035)
2025-11-23 16:21:41 (140052): Preference change detected
2025-11-23 16:21:41 (140052): Setting CPU throttle for VM. (40%)
2025-11-23 16:21:41 (140052): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-23 16:21:43 (140052): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-23 16:21:43 (140052): Guest Log: BIOS: Booting from Hard Disk...
2025-11-23 16:21:47 (140052): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-23 16:21:47 (140052): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-23 16:21:47 (140052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-23 16:21:57 (140052): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-23 16:21:57 (140052): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-23 16:22:13 (140052): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-23 16:22:13 (140052): Guest Log: 00:00:00.000218 main     Log opened 2025-11-23T15:22:11.410520000Z
2025-11-23 16:22:13 (140052): Guest Log: 00:00:00.000397 main     OS Product: Linux
2025-11-23 16:22:13 (140052): Guest Log: 00:00:00.000429 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-23 16:22:13 (140052): Guest Log: 00:00:00.000450 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-23 16:22:13 (140052): Guest Log: 00:00:00.000470 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-23 16:22:13 (140052): Guest Log: 00:00:00.000470 main     Process ID: 1387
2025-11-23 16:22:13 (140052): Guest Log: 00:00:00.000471 main     Package type: LINUX_64BITS_GENERIC
2025-11-23 16:22:13 (140052): Guest Log: 00:00:00.001661 main     5.2.32 r132073 started. Verbose level = 0
2025-11-23 16:22:13 (140052): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-23 16:22:13 (140052): Guest Log: [INFO] Mounting shared directory
2025-11-23 16:22:13 (140052): Guest Log: [INFO] Checking for init_data.xml
2025-11-23 16:22:17 (140052): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-23 16:22:17 (140052): Guest Log: [INFO] Detected branch: prod
2025-11-23 16:22:18 (140052): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-23 16:22:18 (140052): Guest Log: Copying input files
2025-11-23 16:22:21 (140052): Guest Log: Copied input files into RunAtlas.
2025-11-23 16:22:21 (140052): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-23 16:22:21 (140052): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-23 16:22:21 (140052): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-23 16:22:21 (140052): Guest Log: Further information can be found at the LHC@home message board.
2025-11-23 16:22:31 (140052): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-23 16:22:31 (140052): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-23 16:22:31 (140052): Guest Log: 2.6.3.0 1662 0 32184 153213 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-23 16:22:32 (140052): Guest Log: copied the webapp to /var/www
2025-11-23 16:22:32 (140052): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-23 16:22:32 (140052): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-23 16:22:32 (140052): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-23 16:22:32 (140052): Guest Log:  *** Starting ATLAS job. (PandaID=6895346100 taskID=47556137) ***
2025-11-23 18:00:42 (140052): Status Report: Elapsed Time: '6000.000000'
2025-11-23 18:00:42 (140052): Status Report: CPU Time: '10370.430000'
2025-11-23 19:39:42 (140052): Status Report: Elapsed Time: '12000.000000'
2025-11-23 19:39:42 (140052): Status Report: CPU Time: '18252.900000'
2025-11-23 21:18:43 (140052): Status Report: Elapsed Time: '18000.000000'
2025-11-23 21:18:43 (140052): Status Report: CPU Time: '27472.690000'
2025-11-23 22:57:43 (140052): Status Report: Elapsed Time: '24000.000000'
2025-11-23 22:57:43 (140052): Status Report: CPU Time: '38563.510000'
2025-11-24 00:36:43 (140052): Status Report: Elapsed Time: '30000.000000'
2025-11-24 00:36:43 (140052): Status Report: CPU Time: '51342.830000'
2025-11-24 02:15:44 (140052): Status Report: Elapsed Time: '36000.000000'
2025-11-24 02:15:44 (140052): Status Report: CPU Time: '70819.040000'
2025-11-24 02:25:47 (140052): VM state change detected. (old = 'running', new = 'paused')
2025-11-24 19:19:59 (140052): VM state change detected. (old = 'paused', new = 'running')
2025-11-24 19:20:00 (140052): Guest Log: 10:03:36.827638 timesync vgsvcTimeSyncWorker: Radical host time change: 60 861 782 000 000ns (HostNow=1 764 008 399 940 000 000 ns HostLast=1 763 947 538 158 000 000 ns)
2025-11-24 19:20:10 (140052): Guest Log: 10:03:46.830908 timesync vgsvcTimeSyncWorker: Radical guest time change: 60 861 716 984 000ns (GuestNow=1 764 008 409 944 114 000 ns GuestLast=1 763 947 548 227 130 000 ns fSetTimeLastLoop=true )
2025-11-24 20:48:57 (140052): Status Report: Elapsed Time: '42000.000000'
2025-11-24 20:48:57 (140052): Status Report: CPU Time: '90298.070000'
2025-11-24 21:20:11 (140052): VM state change detected. (old = 'running', new = 'paused')
2025-11-25 02:41:56 (140052): VM state change detected. (old = 'paused', new = 'running')
2025-11-25 02:42:05 (140052): Guest Log: 12:03:57.632922 timesync vgsvcTimeSyncWorker: Radical host time change: 19 314 313 000 000ns (HostNow=1 764 034 924 859 000 000 ns HostLast=1 764 015 610 546 000 000 ns)
2025-11-25 02:42:15 (140052): Guest Log: 12:04:07.636211 timesync vgsvcTimeSyncWorker: Radical guest time change: 19 314 514 937 000ns (GuestNow=1 764 034 935 061 497 000 ns GuestLast=1 764 015 620 546 560 000 ns fSetTimeLastLoop=true )
2025-11-25 03:49:43 (140052): Status Report: Elapsed Time: '48000.000000'
2025-11-25 03:49:43 (140052): Status Report: CPU Time: '109769.080000'
2025-11-25 04:34:21 (140052): Guest Log:  *** Job finished ***
2025-11-25 04:34:21 (140052): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:33:44,305 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:33:44,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:10,879 | INFO     | [monitor] cgroup control has ended
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:12,134 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140351317387072)>', '<ExcThread(monitor, started 140350706398976)>']
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:12,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:12,500 | INFO     | [monitor] control thread has ended
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,260 | INFO     | all workflow threads have been joined
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,261 | INFO     | end of generic workflow (traces error code: 0)
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,261 | INFO     | traces error code: 0
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,387 [wrapper] ==== pilot stdout END ====
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,391 [wrapper] ==== wrapper stdout RESUME ====
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,395 [wrapper] pilotpid: 6108
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,399 [wrapper] Pilot exit status: 0
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,415 [wrapper] pandaids: 6895346100
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,486 [wrapper] cleanup supervisor_pilot 18824 6109
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,501 [wrapper] Test setup, not cleaning
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,505 [wrapper] apfmon messages muted
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,508 [wrapper] ==== wrapper stdout END ====
2025-11-25 04:34:21 (140052): Guest Log: 2025-11-25 03:34:17,512 [wrapper] ==== wrapper stderr END ====
2025-11-25 04:34:21 (140052): Guest Log:  *** Error codes and diagnostics ***
2025-11-25 04:34:21 (140052): Guest Log:     "exeErrorCode": 0,
2025-11-25 04:34:21 (140052): Guest Log:     "exeErrorDiag": "",
2025-11-25 04:34:21 (140052): Guest Log:     "pilotErrorCode": 0,
2025-11-25 04:34:21 (140052): Guest Log:     "pilotErrorDiag": "",
2025-11-25 04:34:21 (140052): Guest Log:  *** Listing of results directory ***
2025-11-25 04:34:21 (140052): Guest Log: total 930948
2025-11-25 04:34:21 (140052): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 22 17:43 pilot3.tar.gz
2025-11-25 04:34:21 (140052): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 22 17:49 runpilot2-wrapper.sh
2025-11-25 04:34:21 (140052): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 22 17:49 queuedata.json
2025-11-25 04:34:21 (140052): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 23 15:22 start_atlas.sh
2025-11-25 04:34:21 (140052): Guest Log: -rw-r--r--. 1 atlas atlas    590101 Nov 23 15:22 input.tar.gz
2025-11-25 04:34:21 (140052): Guest Log: -rw-r--r--. 1 atlas atlas      6452 Nov 23 15:22 init_data.xml
2025-11-25 04:34:21 (140052): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 15:22 EVNT.47483658._000456.pool.root.1 -> /data/./ATLAS.root_0
2025-11-25 04:34:21 (140052): Guest Log: -rw-r--r--. 1 atlas atlas      2784 Nov 23 15:22 pandaJob.out
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas    989785 Nov 23 15:24 agis_schedconf.cvmfs.json
2025-11-25 04:34:21 (140052): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 15:25 pilot3
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas 935283503 Nov 25 03:32 HITS.47556137._004514.pool.root.1
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas        98 Nov 25 03:32 pilot_heartbeat.json
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas      1052 Nov 25 03:32 memory_monitor_summary.json
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas   1516227 Nov 25 03:33 agis_ddmendpoints.agis.ALL.json
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas   1932137 Nov 25 03:33 log.47556137._004514.job.log.tgz.1
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas      8673 Nov 25 03:33 heartbeat.json
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas      4877 Nov 25 03:34 pilotlog.txt
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas   5150155 Nov 25 03:34 log.47556137._004514.job.log.1
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas       353 Nov 25 03:34 output.list
2025-11-25 04:34:21 (140052): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 25 03:34 runtime_log
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas   7106560 Nov 25 03:34 result.tar.gz
2025-11-25 04:34:21 (140052): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Nov 25 03:34 runtime_log.err
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas       661 Nov 25 03:34 djWNDmWu6g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnJKKDmCOYPhm.diag
2025-11-25 04:34:21 (140052): Guest Log: Looking for outputfile HITS.47556137._004514.pool.root.1
2025-11-25 04:34:21 (140052): Guest Log: HITS file was successfully produced
2025-11-25 04:34:21 (140052): Guest Log: -rw-------. 1 atlas atlas 935283503 Nov 25 03:32 /home/atlas/RunAtlas/HITS.47556137._004514.pool.root.1
2025-11-25 04:34:21 (140052): Guest Log: Successfully finished the ATLAS job!
2025-11-25 04:34:21 (140052): Guest Log: Copying the results back to the shared directory!
2025-11-25 04:34:21 (140052): Guest Log:  *** Contents of shared directory: ***
2025-11-25 04:34:22 (140052): Guest Log: total 408260
2025-11-25 04:34:22 (140052): Guest Log: -rw-r--r--. 1 root root 410328645 Nov 23 15:21 ATLAS.root_0
2025-11-25 04:34:22 (140052): Guest Log: -rw-r--r--. 1 root root      6452 Nov 23 15:21 init_data.xml
2025-11-25 04:34:22 (140052): Guest Log: -rw-r--r--. 1 root root    590101 Nov 23 15:21 input.tar.gz
2025-11-25 04:34:22 (140052): Guest Log: -rw-r--r--. 1 root root   7106560 Nov 25 03:34 result.tar.gz
2025-11-25 04:34:22 (140052): Guest Log: -rw-r--r--. 1 root root     15847 Nov 23 15:21 start_atlas.sh
2025-11-25 04:34:22 (140052): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-25 04:34:22 (140052): VM Completion File Detected.
2025-11-25 04:34:22 (140052): Powering off VM.
2025-11-25 04:34:23 (140052): Successfully stopped VM.
2025-11-25 04:34:23 (140052): Deregistering VM. (boinc_0073b521d438dd0c, slot#2)
2025-11-25 04:34:23 (140052): Removing network bandwidth throttle group from VM.
2025-11-25 04:34:23 (140052): Removing VM from VirtualBox.
2025-11-25 04:34:28 (140052): called boinc_finish(0)

</stderr_txt>
]]>

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