Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
10:16:24 (991437): wrapper (7.7.26015): starting
10:16:24 (991437): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 10:16:24] Arguments: --nthreads 4
[2025-11-23 10:16:24] Threads: 4
[2025-11-23 10:16:24] Checking for CVMFS
[2025-11-23 10:16:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:16:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:16:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:16:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:16:24] 2.13.2.0 774864 156 52788 153216 3 5 4049683 4096001 5172 130560 0 624972 99.231 296601 2174 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-23 10:16:24] CVMFS is ok
[2025-11-23 10:16:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:16:24] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-23 10:16:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-23 10:16:24] Further information can be found at the LHC@home message board.
[2025-11-23 10:16:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:16:24] Checking for apptainer binary...
[2025-11-23 10:16:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:16:24] Running /usr/bin/apptainer --version
[2025-11-23 10:16:24] apptainer version 1.4.3
[2025-11-23 10:16:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:16:24] msi670e
[2025-11-23 10:16:24] apptainer works
[2025-11-23 10:16:24] Set ATHENA_PROC_NUMBER=4
[2025-11-23 10:16:24] Set ATHENA_CORE_NUMBER=4
[2025-11-23 10:16:24] Starting ATLAS job with PandaID=6895336174
[2025-11-23 10:16:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 16:35:17]  *** The last 200 lines of the pilot log: ***
[2025-11-23 16:35:17] 2025-11-23 23:34:07,427 | INFO     | monitor loop #1718: job 0:6895336174 is in state 'finished'
[2025-11-23 16:35:17] 2025-11-23 23:34:07,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 16:35:17] 2025-11-23 23:34:08,183 | INFO     | time since job start (22654s) is within the limit (172800.0s)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,872 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 16:35:17] 2025-11-23 23:34:09,875 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5094.222499999999
[2025-11-23 16:35:17] 2025-11-23 23:34:09,877 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6895336174/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,878 | INFO     | extracted standard info from prmon json
[2025-11-23 16:35:17] 2025-11-23 23:34:09,878 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 16:35:17] 2025-11-23 23:34:09,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 16:35:17] 2025-11-23 23:34:09,880 | INFO     | fitting pss+swap vs Time
[2025-11-23 16:35:17] 2025-11-23 23:34:09,880 | INFO     | sum of square deviations: 15834231770.0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,882 | INFO     | sum of deviations: 78539369039.99997
[2025-11-23 16:35:17] 2025-11-23 23:34:09,882 | INFO     | mean x: 1763929498.0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,882 | INFO     | mean y: 2258818.5929919137
[2025-11-23 16:35:17] 2025-11-23 23:34:09,882 | INFO     | intersect: -8747007443.028988
[2025-11-23 16:35:17] 2025-11-23 23:34:09,882 | INFO     | chi2: 2.8116333330297913
[2025-11-23 16:35:17] 2025-11-23 23:34:09,883 | INFO     | sum of square deviations: 15202619927.5
[2025-11-23 16:35:17] 2025-11-23 23:34:09,884 | INFO     | sum of deviations: 120406858242.0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,884 | INFO     | mean x: 1763929345.5
[2025-11-23 16:35:17] 2025-11-23 23:34:09,884 | INFO     | mean y: 2268853.5409836066
[2025-11-23 16:35:17] 2025-11-23 23:34:09,884 | INFO     | intersect: -13968296198.100662
[2025-11-23 16:35:17] 2025-11-23 23:34:09,884 | INFO     | chi2: 1.520504686722019
[2025-11-23 16:35:17] 2025-11-23 23:34:09,884 | INFO     | current chi2=1.520504686722019 (change=45.920946772830554 %)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,884 | INFO     | sum of square deviations: 14588031660.0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,886 | INFO     | sum of deviations: 117498564658.0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,886 | INFO     | mean x: 1763929193.0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,886 | INFO     | mean y: 2268131.8781163436
[2025-11-23 16:35:17] 2025-11-23 23:34:09,886 | INFO     | intersect: -14205210516.810549
[2025-11-23 16:35:17] 2025-11-23 23:34:09,886 | INFO     | chi2: 1.5205129872355736
[2025-11-23 16:35:17] 2025-11-23 23:34:09,886 | INFO     | current chi2=1.5205129872355736 (change=-0.000545905160765273 %)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,886 | INFO     | right removable region: 360
[2025-11-23 16:35:17] 2025-11-23 23:34:09,886 | INFO     | sum of square deviations: 15202619927.5
[2025-11-23 16:35:17] 2025-11-23 23:34:09,888 | INFO     | sum of deviations: 25578132955.000027
[2025-11-23 16:35:17] 2025-11-23 23:34:09,888 | INFO     | mean x: 1763929650.5
[2025-11-23 16:35:17] 2025-11-23 23:34:09,888 | INFO     | mean y: 2271524.4808743168
[2025-11-23 16:35:17] 2025-11-23 23:34:09,888 | INFO     | intersect: -2965508196.311973
[2025-11-23 16:35:17] 2025-11-23 23:34:09,888 | INFO     | chi2: 1.3281868365545284
[2025-11-23 16:35:17] 2025-11-23 23:34:09,888 | INFO     | current chi2=1.3281868365545284 (change=52.76102253620368 %)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,888 | INFO     | sum of square deviations: 14588031660.0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,889 | INFO     | sum of deviations: 21238981036.999992
[2025-11-23 16:35:17] 2025-11-23 23:34:09,889 | INFO     | mean x: 1763929803.0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,890 | INFO     | mean y: 2272602.9279778395
[2025-11-23 16:35:17] 2025-11-23 23:34:09,890 | INFO     | intersect: -2565864929.926549
[2025-11-23 16:35:17] 2025-11-23 23:34:09,890 | INFO     | chi2: 1.3259061964462766
[2025-11-23 16:35:17] 2025-11-23 23:34:09,890 | INFO     | current chi2=1.3259061964462766 (change=0.1717107898891728 %)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,890 | INFO     | left removable region: 20
[2025-11-23 16:35:17] 2025-11-23 23:34:09,890 | INFO     | sum of square deviations: 12187409905.0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,891 | INFO     | sum of deviations: 52489194142.5
[2025-11-23 16:35:17] 2025-11-23 23:34:09,891 | INFO     | mean x: 1763929772.5
[2025-11-23 16:35:17] 2025-11-23 23:34:09,891 | INFO     | mean y: 2284602.467647059
[2025-11-23 16:35:17] 2025-11-23 23:34:09,891 | INFO     | intersect: -7594674308.752986
[2025-11-23 16:35:17] 2025-11-23 23:34:09,891 | INFO     | chi2: 0.01611982765163549
[2025-11-23 16:35:17] 2025-11-23 23:34:09,891 | INFO     | current memory leak: 4.31 B/s (using 340 data points, chi2=0.02)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | could have reported an average CPU frequency of 4999 MHz (16 samples)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | ..............................
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | . Timing measurements:
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | . get job = 0 s
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | . initial setup = 6 s
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | . payload setup = 3 s
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | . stage-in = 0 s
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | . payload execution = 22625 s
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | . stage-out = 2 s
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | . log creation = 0 s
[2025-11-23 16:35:17] 2025-11-23 23:34:09,892 | INFO     | ..............................
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | 
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | job summary report
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | --------------------------------------------------
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | PanDA job id: 6895336174
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | task id: 47556149
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | errors: (none)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | pilot state: finished 
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | transexitcode: 0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | exeerrorcode: 0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | exeerrordiag: 
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | exitcode: 0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | exitmsg: OK
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | cpuconsumptiontime: 89542 s
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | nevents: 1000
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | neventsw: 0
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | pid: 1001974
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | pgrp: 1001974
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | corecount: 4
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | event service: False
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | sizes: {0: 2298761, 2: 2299023, 11: 2299051, 22631: 2334846, 22632: 2334845, 22635: 2343909, 22638: 2344093, 22642: 2344339}
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | --------------------------------------------------
[2025-11-23 16:35:17] 2025-11-23 23:34:09,931 | INFO     | 
[2025-11-23 16:35:17] 2025-11-23 23:34:09,932 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | job 6895336174 has completed (purged errors)
[2025-11-23 16:35:17] 2025-11-23 23:34:09,942 | INFO     | overall cleanup function is called
[2025-11-23 16:35:17] 2025-11-23 23:34:10,952 | INFO     | --- collectZombieJob: --- 10, [1001974]
[2025-11-23 16:35:17] 2025-11-23 23:34:10,952 | INFO     | zombie collector waiting for pid 1001974
[2025-11-23 16:35:17] 2025-11-23 23:34:10,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 16:35:17] 2025-11-23 23:34:10,952 | INFO     | collected zombie processes
[2025-11-23 16:35:17] 2025-11-23 23:34:10,952 | INFO     | will attempt to kill all subprocesses of pid=1001974
[2025-11-23 16:35:17] 2025-11-23 23:34:11,032 | INFO     | process IDs to be killed: [1001974] (in reverse order)
[2025-11-23 16:35:17] 2025-11-23 23:34:11,069 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 16:35:17] 2025-11-23 23:34:11,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 16:35:17] 2025-11-23 23:34:11,072 | INFO     | did not find any defunct processes belonging to 1001974
[2025-11-23 16:35:17] 2025-11-23 23:34:11,074 | INFO     | did not find any defunct processes belonging to 1001974
[2025-11-23 16:35:17] 2025-11-23 23:34:11,075 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 16:35:17] 2025-11-23 23:34:11,075 | INFO     | ready for new job
[2025-11-23 16:35:17] 2025-11-23 23:34:11,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 16:35:17] 2025-11-23 23:34:11,076 | INFO     | ***************************************
[2025-11-23 16:35:17] 2025-11-23 23:34:11,076 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 16:35:17] 2025-11-23 23:34:11,076 | INFO     | ***************************************
[2025-11-23 16:35:17] 2025-11-23 23:34:11,076 | INFO     | 
[2025-11-23 16:35:17] 2025-11-23 23:34:11,077 | INFO     | architecture information:
[2025-11-23 16:35:17] 2025-11-23 23:34:11,077 | INFO     | executing command: cat /etc/os-release
[2025-11-23 16:35:17] 2025-11-23 23:34:11,086 | INFO     | cat /etc/os-release:
[2025-11-23 16:35:17] NAME="CentOS Linux"
[2025-11-23 16:35:17] VERSION="7 (Core)"
[2025-11-23 16:35:17] ID="centos"
[2025-11-23 16:35:17] ID_LIKE="rhel fedora"
[2025-11-23 16:35:17] VERSION_ID="7"
[2025-11-23 16:35:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 16:35:17] ANSI_COLOR="0;31"
[2025-11-23 16:35:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 16:35:17] HOME_URL="https://www.centos.org/"
[2025-11-23 16:35:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 16:35:17] 
[2025-11-23 16:35:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 16:35:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 16:35:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 16:35:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 16:35:17] 
[2025-11-23 16:35:17] 2025-11-23 23:34:11,086 | INFO     | ***************************************
[2025-11-23 16:35:17] 2025-11-23 23:34:11,588 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-11-23 16:35:17] 2025-11-23 23:34:11,597 | INFO     | sufficient remaining disk space (439385849856 B)
[2025-11-23 16:35:17] 2025-11-23 23:34:11,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 16:35:17] 2025-11-23 23:34:11,597 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 16:35:17] 2025-11-23 23:34:11,597 | INFO     | update_server=False
[2025-11-23 16:35:17] 2025-11-23 23:34:11,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 16:35:17] 2025-11-23 23:34:11,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:35:17] 2025-11-23 23:34:11,597 | INFO     | aborting loop
[2025-11-23 16:35:17] 2025-11-23 23:34:11,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:35:17] 2025-11-23 23:34:11,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 16:35:17] 2025-11-23 23:34:11,618 | INFO     | all job control threads have been joined
[2025-11-23 16:35:17] 2025-11-23 23:34:11,725 | INFO     | all data control threads have been joined
[2025-11-23 16:35:17] 2025-11-23 23:34:11,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 16:35:17] 2025-11-23 23:34:12,602 | INFO     | [job] job monitor thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:12,602 | INFO     | [job] retrieve thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:12,603 | INFO     | [job] queue monitor thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:12,623 | INFO     | [job] control thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:12,660 | INFO     | [payload] failed_post thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:12,730 | INFO     | [data] control thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:12,884 | INFO     | all payload control threads have been joined
[2025-11-23 16:35:17] 2025-11-23 23:34:12,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:13,123 | INFO     | [payload] validate_post thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:13,245 | INFO     | [job] validate thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:13,250 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:13,376 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:13,552 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:13,602 | INFO     | [data] copytool_out thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:13,889 | INFO     | [payload] control thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:14,022 | INFO     | [data] copytool_in thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:15,844 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 16:35:17] 2025-11-23 23:34:41,336 | INFO     | PID=995295 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 16:35:17] 2025-11-23 23:34:41,336 | INFO     | .. there are 7 such processes running
[2025-11-23 16:35:17] 2025-11-23 23:34:41,336 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 16:35:17] 2025-11-23 23:34:41,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 16:35:17] 2025-11-23 23:34:41,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 16:35:17] 2025-11-23 23:35:11,529 | INFO     | [monitor] cgroup control has ended
[2025-11-23 16:35:17] 2025-11-23 23:35:12,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136137420490560)>', '<ExcThread(monitor, started 136136588498688)>']
[2025-11-23 16:35:17] 2025-11-23 23:35:12,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 16:35:17] 2025-11-23 23:35:12,488 | INFO     | [monitor] control thread has ended
[2025-11-23 16:35:17] 2025-11-23 23:35:17,024 | INFO     | all workflow threads have been joined
[2025-11-23 16:35:17] 2025-11-23 23:35:17,024 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 16:35:17] 2025-11-23 23:35:17,024 | INFO     | traces error code: 0
[2025-11-23 16:35:17] 2025-11-23 23:35:17,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 16:35:17] 2025-11-23 23:35:17,076 [wrapper] ==== pilot stdout END ====
[2025-11-23 16:35:17] 2025-11-23 23:35:17,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 16:35:17] 2025-11-23 23:35:17,079 [wrapper] pilotpid: 995295
[2025-11-23 16:35:17] 2025-11-23 23:35:17,080 [wrapper] Pilot exit status: 0
[2025-11-23 16:35:17] 2025-11-23 23:35:17,085 [wrapper] pandaids: 6895336174
[2025-11-23 16:35:17] 2025-11-23 23:35:17,109 [wrapper] cleanup supervisor_pilot 1347701 995296
[2025-11-23 16:35:17] 2025-11-23 23:35:17,111 [wrapper] Test setup, not cleaning
[2025-11-23 16:35:17] 2025-11-23 23:35:17,112 [wrapper] apfmon messages muted
[2025-11-23 16:35:17] 2025-11-23 23:35:17,114 [wrapper] ==== wrapper stdout END ====
[2025-11-23 16:35:17] 2025-11-23 23:35:17,115 [wrapper] ==== wrapper stderr END ====
[2025-11-23 16:35:17]  *** Error codes and diagnostics ***
[2025-11-23 16:35:17]     "exeErrorCode": 0,
[2025-11-23 16:35:17]     "exeErrorDiag": "",
[2025-11-23 16:35:17]     "pilotErrorCode": 0,
[2025-11-23 16:35:17]     "pilotErrorDiag": "",
[2025-11-23 16:35:17]  *** Listing of results directory ***
[2025-11-23 16:35:17] total 1306436
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc    576529 Nov 21 22:12 pilot3.tar.gz
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc      5112 Nov 21 22:14 queuedata.json
[2025-11-23 16:35:17] -rwx------ 1 boinc boinc     36292 Nov 21 22:15 runpilot2-wrapper.sh
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc       100 Nov 23 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 16:35:17] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 10:16 run_atlas
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc       105 Nov 23 10:16 job.xml
[2025-11-23 16:35:17] drwxrwx--x 2 boinc boinc      4096 Nov 23 10:16 shared
[2025-11-23 16:35:17] -rw-r--r-- 2 boinc boinc    590099 Nov 23 10:16 input.tar.gz
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc      9946 Nov 23 10:16 init_data.xml
[2025-11-23 16:35:17] -rw-r--r-- 2 boinc boinc 410012456 Nov 23 10:16 EVNT.47483658._001068.pool.root.1
[2025-11-23 16:35:17] -rw-r--r-- 2 boinc boinc     15847 Nov 23 10:16 start_atlas.sh
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc         0 Nov 23 10:16 boinc_lockfile
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc      2784 Nov 23 10:16 pandaJob.out
[2025-11-23 16:35:17] -rw------- 1 boinc boinc    989786 Nov 23 10:16 agis_schedconf.cvmfs.json
[2025-11-23 16:35:17] drwx------ 5 boinc boinc      4096 Nov 23 10:16 pilot3
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc       532 Nov 23 16:30 boinc_task_state.xml
[2025-11-23 16:35:17] -rw------- 1 boinc boinc 914843315 Nov 23 16:33 HITS.47556149._000542.pool.root.1
[2025-11-23 16:35:17] -rw------- 1 boinc boinc      1032 Nov 23 16:33 memory_monitor_summary.json
[2025-11-23 16:35:17] -rw------- 1 boinc boinc   1526164 Nov 23 16:34 agis_ddmendpoints.agis.ALL.json
[2025-11-23 16:35:17] -rw------- 1 boinc boinc   1213852 Nov 23 16:34 log.47556149._000542.job.log.tgz.1
[2025-11-23 16:35:17] -rw------- 1 boinc boinc        95 Nov 23 16:34 pilot_heartbeat.json
[2025-11-23 16:35:17] -rw------- 1 boinc boinc      8540 Nov 23 16:34 heartbeat.json
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc        28 Nov 23 16:35 wrapper_checkpoint.txt
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc      8192 Nov 23 16:35 boinc_mmap_file
[2025-11-23 16:35:17] -rw------- 1 boinc boinc      4830 Nov 23 16:35 pilotlog.txt
[2025-11-23 16:35:17] -rw------- 1 boinc boinc   3288546 Nov 23 16:35 log.47556149._000542.job.log.1
[2025-11-23 16:35:17] -rw------- 1 boinc boinc       353 Nov 23 16:35 output.list
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc       620 Nov 23 16:35 runtime_log
[2025-11-23 16:35:17] -rw------- 1 boinc boinc   4526080 Nov 23 16:35 result.tar.gz
[2025-11-23 16:35:17] -rw------- 1 boinc boinc       660 Nov 23 16:35 ZUhKDmh9ug8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCyHKDmjWCiem.diag
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc      8920 Nov 23 16:35 runtime_log.err
[2025-11-23 16:35:17] -rw-r--r-- 1 boinc boinc     21347 Nov 23 16:35 stderr.txt
[2025-11-23 16:35:17] HITS file was successfully produced:
[2025-11-23 16:35:17] -rw------- 1 boinc boinc 914843315 Nov 23 16:33 shared/HITS.pool.root.1
[2025-11-23 16:35:17]  *** Contents of shared directory: ***
[2025-11-23 16:35:17] total 1298832
[2025-11-23 16:35:17] -rw-r--r-- 2 boinc boinc    590099 Nov 23 10:16 input.tar.gz
[2025-11-23 16:35:17] -rw-r--r-- 2 boinc boinc 410012456 Nov 23 10:16 ATLAS.root_0
[2025-11-23 16:35:17] -rw-r--r-- 2 boinc boinc     15847 Nov 23 10:16 start_atlas.sh
[2025-11-23 16:35:17] -rw------- 1 boinc boinc 914843315 Nov 23 16:33 HITS.pool.root.1
[2025-11-23 16:35:17] -rw------- 1 boinc boinc   4526080 Nov 23 16:35 result.tar.gz
16:35:19 (991437): run_atlas exited; CPU time 89556.205853
16:35:19 (991437): called boinc_finish(0)

</stderr_txt>
]]>

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