Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:32:39 (19932): wrapper (7.7.26015): starting
10:32:39 (19932): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 10:32:39] Arguments: --nthreads 8
[2025-11-23 10:32:39] Threads: 8
[2025-11-23 10:32:39] Checking for CVMFS
[2025-11-23 10:32:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:32:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:32:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:32:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:32:39] 2.11.2.0 6956 113521 139896 153213 3 90 12576608 18432000 1725 130560 0 82673886 99.973 4865770 30885 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 10:32:39] CVMFS is ok
[2025-11-23 10:32:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:32:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:32:39] Further information can be found at the LHC@home message board.
[2025-11-23 10:32:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:32:39] Checking for apptainer binary...
[2025-11-23 10:32:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:32:39] Running /usr/bin/apptainer --version
[2025-11-23 10:32:39] apptainer version 1.3.2-1.el7
[2025-11-23 10:32:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:32:40] c-206-16.aglt2.org
[2025-11-23 10:32:40] apptainer works
[2025-11-23 10:32:40] Set ATHENA_PROC_NUMBER=8
[2025-11-23 10:32:40] Set ATHENA_CORE_NUMBER=8
[2025-11-23 10:32:40] Starting ATLAS job with PandaID=6895336153
[2025-11-23 10:32:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 06:01:07]  *** The last 200 lines of the pilot log: ***
[2025-11-24 06:01:07] 2025-11-24 11:00:33,063 | INFO     | monitor loop #5011: job 0:6895336153 is in state 'finished'
[2025-11-24 06:01:07] 2025-11-24 11:00:33,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 06:01:07] 2025-11-24 11:00:33,924 | INFO     | time since job start (70062s) is within the limit (172800.0s)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,425 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 06:01:07] 2025-11-24 11:00:34,429 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2189.4583333333335
[2025-11-24 06:01:07] 2025-11-24 11:00:34,432 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895336153/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,432 | INFO     | extracted standard info from prmon json
[2025-11-24 06:01:07] 2025-11-24 11:00:34,432 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 06:01:07] 2025-11-24 11:00:34,432 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 06:01:07] 2025-11-24 11:00:34,448 | INFO     | fitting pss+swap vs Time
[2025-11-24 06:01:07] 2025-11-24 11:00:34,450 | INFO     | sum of square deviations: 469140956750.4628
[2025-11-24 06:01:07] 2025-11-24 11:00:34,476 | INFO     | sum of deviations: 2460690902075.916
[2025-11-24 06:01:07] 2025-11-24 11:00:34,476 | INFO     | mean x: 1763946981.086237
[2025-11-24 06:01:07] 2025-11-24 11:00:34,476 | INFO     | mean y: 2868979.475609756
[2025-11-24 06:01:07] 2025-11-24 11:00:34,477 | INFO     | intersect: -9249208089.57449
[2025-11-24 06:01:07] 2025-11-24 11:00:34,478 | INFO     | chi2: 4.354565831181114
[2025-11-24 06:01:07] 2025-11-24 11:00:34,479 | INFO     | sum of square deviations: 463037921998.7356
[2025-11-24 06:01:07] 2025-11-24 11:00:34,505 | INFO     | sum of deviations: 2718598479510.387
[2025-11-24 06:01:07] 2025-11-24 11:00:34,505 | INFO     | mean x: 1763946828.5888014
[2025-11-24 06:01:07] 2025-11-24 11:00:34,505 | INFO     | mean y: 2875416.9518810147
[2025-11-24 06:01:07] 2025-11-24 11:00:34,505 | INFO     | intersect: -10353648181.45823
[2025-11-24 06:01:07] 2025-11-24 11:00:34,506 | INFO     | chi2: 2.574364193210433
[2025-11-24 06:01:07] 2025-11-24 11:00:34,506 | INFO     | current chi2=2.574364193210433 (change=40.88126593984288 %)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,507 | INFO     | sum of square deviations: 456987981555.6773
[2025-11-24 06:01:07] 2025-11-24 11:00:34,533 | INFO     | sum of deviations: 2733934809247.229
[2025-11-24 06:01:07] 2025-11-24 11:00:34,533 | INFO     | mean x: 1763946676.0905097
[2025-11-24 06:01:07] 2025-11-24 11:00:34,533 | INFO     | mean y: 2875801.900702988
[2025-11-24 06:01:07] 2025-11-24 11:00:34,533 | INFO     | intersect: -10549951436.581581
[2025-11-24 06:01:07] 2025-11-24 11:00:34,534 | INFO     | chi2: 2.5137733686241246
[2025-11-24 06:01:07] 2025-11-24 11:00:34,534 | INFO     | current chi2=2.5137733686241246 (change=2.3536228769072105 %)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,535 | INFO     | right removable region: 1137
[2025-11-24 06:01:07] 2025-11-24 11:00:34,536 | INFO     | sum of square deviations: 463037511468.736
[2025-11-24 06:01:07] 2025-11-24 11:00:34,561 | INFO     | sum of deviations: 2151447645990.2734
[2025-11-24 06:01:07] 2025-11-24 11:00:34,562 | INFO     | mean x: 1763947133.5888014
[2025-11-24 06:01:07] 2025-11-24 11:00:34,562 | INFO     | mean y: 2876698.302712161
[2025-11-24 06:01:07] 2025-11-24 11:00:34,562 | INFO     | intersect: -8193089749.800392
[2025-11-24 06:01:07] 2025-11-24 11:00:34,563 | INFO     | chi2: 2.216429245064722
[2025-11-24 06:01:07] 2025-11-24 11:00:34,563 | INFO     | current chi2=2.216429245064722 (change=49.101027955672286 %)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,564 | INFO     | sum of square deviations: 456987439022.036
[2025-11-24 06:01:07] 2025-11-24 11:00:34,589 | INFO     | sum of deviations: 2057281733137.558
[2025-11-24 06:01:07] 2025-11-24 11:00:34,589 | INFO     | mean x: 1763947286.0887523
[2025-11-24 06:01:07] 2025-11-24 11:00:34,589 | INFO     | mean y: 2879071.5984182777
[2025-11-24 06:01:07] 2025-11-24 11:00:34,590 | INFO     | intersect: -7938119345.456481
[2025-11-24 06:01:07] 2025-11-24 11:00:34,591 | INFO     | chi2: 2.122444042299063
[2025-11-24 06:01:07] 2025-11-24 11:00:34,591 | INFO     | current chi2=2.122444042299063 (change=4.240388136681279 %)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,591 | INFO     | left removable region: 20
[2025-11-24 06:01:07] 2025-11-24 11:00:34,592 | INFO     | sum of square deviations: 432152941231.8443
[2025-11-24 06:01:07] 2025-11-24 11:00:34,616 | INFO     | sum of deviations: 2191221967327.1323
[2025-11-24 06:01:07] 2025-11-24 11:00:34,616 | INFO     | mean x: 1763947255.5917637
[2025-11-24 06:01:07] 2025-11-24 11:00:34,616 | INFO     | mean y: 2889492.340196956
[2025-11-24 06:01:07] 2025-11-24 11:00:34,616 | INFO     | intersect: -8941166203.870956
[2025-11-24 06:01:07] 2025-11-24 11:00:34,617 | INFO     | chi2: 0.20778609027417846
[2025-11-24 06:01:07] 2025-11-24 11:00:34,617 | INFO     | current memory leak: 5.07 B/s (using 1117 data points, chi2=0.21)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,618 | INFO     | could have reported an average CPU frequency of 2623 MHz (42 samples)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,618 | INFO     | ..............................
[2025-11-24 06:01:07] 2025-11-24 11:00:34,618 | INFO     | . Timing measurements:
[2025-11-24 06:01:07] 2025-11-24 11:00:34,618 | INFO     | . get job = 0 s
[2025-11-24 06:01:07] 2025-11-24 11:00:34,619 | INFO     | . initial setup = 2 s
[2025-11-24 06:01:07] 2025-11-24 11:00:34,619 | INFO     | . payload setup = 5 s
[2025-11-24 06:01:07] 2025-11-24 11:00:34,619 | INFO     | . stage-in = 0 s
[2025-11-24 06:01:07] 2025-11-24 11:00:34,619 | INFO     | . payload execution = 70025 s
[2025-11-24 06:01:07] 2025-11-24 11:00:34,619 | INFO     | . stage-out = 3 s
[2025-11-24 06:01:07] 2025-11-24 11:00:34,619 | INFO     | . log creation = 0 s
[2025-11-24 06:01:07] 2025-11-24 11:00:34,619 | INFO     | ..............................
[2025-11-24 06:01:07] 2025-11-24 11:00:34,808 | INFO     | 
[2025-11-24 06:01:07] 2025-11-24 11:00:34,808 | INFO     | job summary report
[2025-11-24 06:01:07] 2025-11-24 11:00:34,808 | INFO     | --------------------------------------------------
[2025-11-24 06:01:07] 2025-11-24 11:00:34,808 | INFO     | PanDA job id: 6895336153
[2025-11-24 06:01:07] 2025-11-24 11:00:34,808 | INFO     | task id: 47556137
[2025-11-24 06:01:07] 2025-11-24 11:00:34,809 | INFO     | errors: (none)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,809 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 06:01:07] 2025-11-24 11:00:34,809 | INFO     | pilot state: finished 
[2025-11-24 06:01:07] 2025-11-24 11:00:34,809 | INFO     | transexitcode: 0
[2025-11-24 06:01:07] 2025-11-24 11:00:34,809 | INFO     | exeerrorcode: 0
[2025-11-24 06:01:07] 2025-11-24 11:00:34,809 | INFO     | exeerrordiag: 
[2025-11-24 06:01:07] 2025-11-24 11:00:34,810 | INFO     | exitcode: 0
[2025-11-24 06:01:07] 2025-11-24 11:00:34,810 | INFO     | exitmsg: OK
[2025-11-24 06:01:07] 2025-11-24 11:00:34,810 | INFO     | cpuconsumptiontime: 538757 s
[2025-11-24 06:01:07] 2025-11-24 11:00:34,810 | INFO     | nevents: 1000
[2025-11-24 06:01:07] 2025-11-24 11:00:34,810 | INFO     | neventsw: 0
[2025-11-24 06:01:07] 2025-11-24 11:00:34,810 | INFO     | pid: 30167
[2025-11-24 06:01:07] 2025-11-24 11:00:34,811 | INFO     | pgrp: 30167
[2025-11-24 06:01:07] 2025-11-24 11:00:34,811 | INFO     | corecount: 8
[2025-11-24 06:01:07] 2025-11-24 11:00:34,811 | INFO     | event service: False
[2025-11-24 06:01:07] 2025-11-24 11:00:34,811 | INFO     | sizes: {0: 2298635, 1: 2298834, 4: 2299096, 12: 2299124, 70034: 2355638, 70038: 2364632, 70041: 2364844, 70048: 2365090}
[2025-11-24 06:01:07] 2025-11-24 11:00:34,815 | INFO     | --------------------------------------------------
[2025-11-24 06:01:07] 2025-11-24 11:00:34,815 | INFO     | 
[2025-11-24 06:01:07] 2025-11-24 11:00:34,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 06:01:07] 2025-11-24 11:00:34,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,833 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,835 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,835 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 06:01:07] 2025-11-24 11:00:34,835 | INFO     | job 6895336153 has completed (purged errors)
[2025-11-24 06:01:07] 2025-11-24 11:00:34,836 | INFO     | overall cleanup function is called
[2025-11-24 06:01:07] 2025-11-24 11:00:35,848 | INFO     | --- collectZombieJob: --- 10, [30167]
[2025-11-24 06:01:07] 2025-11-24 11:00:35,849 | INFO     | zombie collector waiting for pid 30167
[2025-11-24 06:01:07] 2025-11-24 11:00:35,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 06:01:07] 2025-11-24 11:00:35,849 | INFO     | collected zombie processes
[2025-11-24 06:01:07] 2025-11-24 11:00:35,849 | INFO     | will attempt to kill all subprocesses of pid=30167
[2025-11-24 06:01:07] 2025-11-24 11:00:35,981 | INFO     | process IDs to be killed: [30167] (in reverse order)
[2025-11-24 06:01:07] 2025-11-24 11:00:36,028 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 06:01:07] 2025-11-24 11:00:36,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 06:01:07] 2025-11-24 11:00:36,032 | INFO     | did not find any defunct processes belonging to 30167
[2025-11-24 06:01:07] 2025-11-24 11:00:36,035 | INFO     | did not find any defunct processes belonging to 30167
[2025-11-24 06:01:07] 2025-11-24 11:00:36,036 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 06:01:07] 2025-11-24 11:00:36,036 | INFO     | ready for new job
[2025-11-24 06:01:07] 2025-11-24 11:00:36,036 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 06:01:07] 2025-11-24 11:00:36,040 | INFO     | ***************************************
[2025-11-24 06:01:07] 2025-11-24 11:00:36,041 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 06:01:07] 2025-11-24 11:00:36,041 | INFO     | ***************************************
[2025-11-24 06:01:07] 2025-11-24 11:00:36,041 | INFO     | 
[2025-11-24 06:01:07] 2025-11-24 11:00:36,042 | INFO     | architecture information:
[2025-11-24 06:01:07] 2025-11-24 11:00:36,042 | INFO     | executing command: cat /etc/os-release
[2025-11-24 06:01:07] 2025-11-24 11:00:36,053 | INFO     | cat /etc/os-release:
[2025-11-24 06:01:07] NAME="CentOS Linux"
[2025-11-24 06:01:07] VERSION="7 (Core)"
[2025-11-24 06:01:07] ID="centos"
[2025-11-24 06:01:07] ID_LIKE="rhel fedora"
[2025-11-24 06:01:07] VERSION_ID="7"
[2025-11-24 06:01:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 06:01:07] ANSI_COLOR="0;31"
[2025-11-24 06:01:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 06:01:07] HOME_URL="https://www.centos.org/"
[2025-11-24 06:01:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 06:01:07] 
[2025-11-24 06:01:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 06:01:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 06:01:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 06:01:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 06:01:07] 
[2025-11-24 06:01:07] 2025-11-24 11:00:36,053 | INFO     | ***************************************
[2025-11-24 06:01:07] 2025-11-24 11:00:36,556 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 06:01:07] 2025-11-24 11:00:36,567 | INFO     | sufficient remaining disk space (25337790464 B)
[2025-11-24 06:01:07] 2025-11-24 11:00:36,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 06:01:07] 2025-11-24 11:00:36,567 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 06:01:07] 2025-11-24 11:00:36,568 | INFO     | update_server=False
[2025-11-24 06:01:07] 2025-11-24 11:00:36,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 06:01:07] 2025-11-24 11:00:36,568 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:01:07] 2025-11-24 11:00:36,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:01:07] 2025-11-24 11:00:36,572 | INFO     | aborting loop
[2025-11-24 06:01:07] 2025-11-24 11:00:37,005 | INFO     | all data control threads have been joined
[2025-11-24 06:01:07] 2025-11-24 11:00:37,573 | INFO     | [job] retrieve thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:37,574 | INFO     | [job] queue monitor thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:37,577 | INFO     | [job] job monitor thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:37,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:37,739 | INFO     | [job] validate thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:37,816 | INFO     | [payload] validate_post thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:37,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 06:01:07] 2025-11-24 11:00:38,011 | INFO     | [data] control thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:38,073 | INFO     | [payload] failed_post thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:38,073 | INFO     | all payload control threads have been joined
[2025-11-24 06:01:07] 2025-11-24 11:00:38,229 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:38,261 | INFO     | all job control threads have been joined
[2025-11-24 06:01:07] 2025-11-24 11:00:38,310 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:38,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 06:01:07] 2025-11-24 11:00:38,425 | INFO     | [data] copytool_in thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:38,679 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:39,079 | INFO     | [payload] control thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:39,266 | INFO     | [job] control thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:39,830 | INFO     | [data] copytool_out thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:42,367 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 06:01:07] 2025-11-24 11:00:47,600 | INFO     | [monitor] cgroup control has ended
[2025-11-24 06:01:07] 2025-11-24 11:00:49,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140294935947072)>', '<ExcThread(monitor, started 140294351738624)>']
[2025-11-24 06:01:07] 2025-11-24 11:00:54,068 | INFO     | all workflow threads have been joined
[2025-11-24 06:01:07] 2025-11-24 11:00:54,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 06:01:07] 2025-11-24 11:00:54,068 | INFO     | traces error code: 0
[2025-11-24 06:01:07] 2025-11-24 11:00:54,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 06:01:07] 2025-11-24 11:01:07,144 | INFO     | PID=23628 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 06:01:07] 2025-11-24 11:01:07,144 | INFO     | .. there are 3 such processes running
[2025-11-24 06:01:07] 2025-11-24 11:01:07,144 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 06:01:07] 2025-11-24 11:01:07,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 06:01:07] 2025-11-24 11:01:07,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 06:01:07] 2025-11-24 11:01:07,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 06:01:07] 2025-11-24 11:01:07,145 | INFO     | [monitor] control thread has ended
[2025-11-24 06:01:07] 2025-11-24 11:01:07,242 [wrapper] ==== pilot stdout END ====
[2025-11-24 06:01:07] 2025-11-24 11:01:07,245 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 06:01:07] 2025-11-24 11:01:07,249 [wrapper] pilotpid: 23628
[2025-11-24 06:01:07] 2025-11-24 11:01:07,253 [wrapper] Pilot exit status: 0
[2025-11-24 06:01:07] 2025-11-24 11:01:07,265 [wrapper] pandaids: 6895336153
[2025-11-24 06:01:07] 2025-11-24 11:01:07,305 [wrapper] cleanup supervisor_pilot 26994 23629
[2025-11-24 06:01:07] 2025-11-24 11:01:07,307 [wrapper] Test setup, not cleaning
[2025-11-24 06:01:07] 2025-11-24 11:01:07,310 [wrapper] apfmon messages muted
[2025-11-24 06:01:07] 2025-11-24 11:01:07,313 [wrapper] ==== wrapper stdout END ====
[2025-11-24 06:01:07] 2025-11-24 11:01:07,315 [wrapper] ==== wrapper stderr END ====
[2025-11-24 06:01:07]  *** Error codes and diagnostics ***
[2025-11-24 06:01:07]     "exeErrorCode": 0,
[2025-11-24 06:01:07]     "exeErrorDiag": "",
[2025-11-24 06:01:07]     "pilotErrorCode": 0,
[2025-11-24 06:01:07]     "pilotErrorDiag": "",
[2025-11-24 06:01:07]  *** Listing of results directory ***
[2025-11-24 06:01:07] total 1314652
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 00:12 pilot3.tar.gz
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 00:12 queuedata.json
[2025-11-24 06:01:07] -rwx------ 1 boincer umatlas     36292 Nov 22 00:12 runpilot2-wrapper.sh
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas       100 Nov 23 10:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 06:01:07] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 10:32 run_atlas
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas       105 Nov 23 10:32 job.xml
[2025-11-24 06:01:07] -rw-r--r-- 2 boincer umatlas 409245525 Nov 23 10:32 EVNT.47483658._000272.pool.root.1
[2025-11-24 06:01:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 10:32 start_atlas.sh
[2025-11-24 06:01:07] drwxrwx--x 2 boincer umatlas      4096 Nov 23 10:32 shared
[2025-11-24 06:01:07] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 10:32 input.tar.gz
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas         0 Nov 23 10:32 boinc_lockfile
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 10:32 pandaJob.out
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas        57 Nov 23 10:32 setup.sh.local
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas    989785 Nov 23 10:32 agis_schedconf.cvmfs.json
[2025-11-24 06:01:07] drwx------ 5 boincer umatlas      4096 Nov 23 10:32 pilot3
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas       533 Nov 24 05:52 boinc_task_state.xml
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas      5952 Nov 24 05:57 init_data.xml
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas 908995365 Nov 24 05:59 HITS.47556137._002687.pool.root.1
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas        95 Nov 24 06:00 pilot_heartbeat.json
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas      1064 Nov 24 06:00 memory_monitor_summary.json
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas   1526164 Nov 24 06:00 agis_ddmendpoints.agis.ALL.json
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas   2306052 Nov 24 06:00 log.47556137._002687.job.log.tgz.1
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas      8662 Nov 24 06:00 heartbeat.json
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 06:00 boinc_mmap_file
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas        29 Nov 24 06:00 wrapper_checkpoint.txt
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas       820 Nov 24 06:01 pilotlog.txt
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas   9714810 Nov 24 06:01 log.47556137._002687.job.log.1
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas       353 Nov 24 06:01 output.list
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas       620 Nov 24 06:01 runtime_log
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas  12042240 Nov 24 06:01 result.tar.gz
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 06:01 runtime_log.err
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas       668 Nov 24 06:01 2PUMDmi6ug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4yJKDmIfpyTm.diag
[2025-11-24 06:01:07] -rw-r--r-- 1 boincer umatlas     21301 Nov 24 06:01 stderr.txt
[2025-11-24 06:01:07] HITS file was successfully produced:
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas 908995365 Nov 24 05:59 shared/HITS.pool.root.1
[2025-11-24 06:01:07]  *** Contents of shared directory: ***
[2025-11-24 06:01:07] total 1299708
[2025-11-24 06:01:07] -rw-r--r-- 2 boincer umatlas 409245525 Nov 23 10:32 ATLAS.root_0
[2025-11-24 06:01:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 10:32 start_atlas.sh
[2025-11-24 06:01:07] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 10:32 input.tar.gz
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas 908995365 Nov 24 05:59 HITS.pool.root.1
[2025-11-24 06:01:07] -rw------- 1 boincer umatlas  12042240 Nov 24 06:01 result.tar.gz
06:01:09 (19932): run_atlas exited; CPU time 537414.381484
06:01:09 (19932): called boinc_finish(0)

</stderr_txt>
]]>

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