Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:46 (869616): wrapper (7.7.26015): starting
09:56:46 (869616): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 09:56:46] Arguments: --nthreads 8
[2025-11-23 09:56:46] Threads: 8
[2025-11-23 09:56:46] Checking for CVMFS
[2025-11-23 09:56:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 09:56:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 09:56:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 09:56:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 09:56:48] 2.13.3.0 17216 25743 496012 153211 0 724 26830840 32935936 51532 16776704 0 457243074 99.680 354890708 48206 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 09:56:48] CVMFS is ok
[2025-11-23 09:56:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 09:56:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 09:56:48] Further information can be found at the LHC@home message board.
[2025-11-23 09:56:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 09:56:48] Checking for apptainer binary...
[2025-11-23 09:56:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 09:56:48] Running /usr/bin/apptainer --version
[2025-11-23 09:56:48] apptainer version 1.4.4-1.el9
[2025-11-23 09:56:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 09:56:49] c7-9-14.aglt2.org
[2025-11-23 09:56:49] apptainer works
[2025-11-23 09:56:49] Set ATHENA_PROC_NUMBER=8
[2025-11-23 09:56:49] Set ATHENA_CORE_NUMBER=8
[2025-11-23 09:56:49] Starting ATLAS job with PandaID=6895336158
[2025-11-23 09:56:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:40:30]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:40:30] 2025-11-24 03:39:29,135 | INFO     | monitor loop #2685: job 0:6895336158 is in state 'finished'
[2025-11-23 22:40:30] 2025-11-24 03:39:29,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:40:30] 2025-11-24 03:39:31,036 | INFO     | time since job start (45689s) is within the limit (172800.0s)
[2025-11-23 22:40:30] 2025-11-24 03:39:31,640 | INFO     | monitor loop #2686: job 0:6895336158 is in state 'finished'
[2025-11-23 22:40:30] 2025-11-24 03:39:31,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:40:30] 2025-11-24 03:39:33,043 | INFO     | time since job start (45691s) is within the limit (172800.0s)
[2025-11-23 22:40:30] 2025-11-24 03:39:34,145 | INFO     | monitor loop #2687: job 0:6895336158 is in state 'finished'
[2025-11-23 22:40:30] 2025-11-24 03:39:34,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:40:30] 2025-11-24 03:39:35,051 | INFO     | time since job start (45693s) is within the limit (172800.0s)
[2025-11-23 22:40:30] 2025-11-24 03:39:36,653 | INFO     | monitor loop #2688: job 0:6895336158 is in state 'finished'
[2025-11-23 22:40:30] 2025-11-24 03:39:36,653 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:40:30] 2025-11-24 03:39:37,064 | INFO     | time since job start (45695s) is within the limit (172800.0s)
[2025-11-23 22:40:30] 2025-11-24 03:39:39,073 | INFO     | time since job start (45697s) is within the limit (172800.0s)
[2025-11-23 22:40:30] 2025-11-24 03:39:39,162 | INFO     | monitor loop #2689: job 0:6895336158 is in state 'finished'
[2025-11-23 22:40:30] 2025-11-24 03:39:39,162 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:40:30] 2025-11-24 03:39:40,691 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 22:40:30] 2025-11-24 03:39:40,702 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3787.7994140624996
[2025-11-23 22:40:30] 2025-11-24 03:39:40,729 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895336158/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:40:30] 2025-11-24 03:39:40,730 | INFO     | extracted standard info from prmon json
[2025-11-23 22:40:30] 2025-11-24 03:39:40,730 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:40:30] 2025-11-24 03:39:40,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:40:30] 2025-11-24 03:39:40,743 | INFO     | fitting pss+swap vs Time
[2025-11-23 22:40:30] 2025-11-24 03:39:40,744 | INFO     | sum of square deviations: 128730538135.76018
[2025-11-23 22:40:30] 2025-11-24 03:39:40,760 | INFO     | sum of deviations: 983836315810.8369
[2025-11-23 22:40:30] 2025-11-24 03:39:40,760 | INFO     | mean x: 1763932783.7278821
[2025-11-23 22:40:30] 2025-11-24 03:39:40,760 | INFO     | mean y: 2823782.1568364613
[2025-11-23 22:40:30] 2025-11-24 03:39:40,760 | INFO     | intersect: -13478213090.776962
[2025-11-23 22:40:30] 2025-11-24 03:39:40,761 | INFO     | chi2: 22.209095587802658
[2025-11-23 22:40:30] 2025-11-24 03:39:40,761 | INFO     | sum of square deviations: 126159634415.67068
[2025-11-23 22:40:30] 2025-11-24 03:39:40,768 | INFO     | sum of deviations: 1246292631755.9707
[2025-11-23 22:40:30] 2025-11-24 03:39:40,768 | INFO     | mean x: 1763932631.2361674
[2025-11-23 22:40:30] 2025-11-24 03:39:40,768 | INFO     | mean y: 2839349.411605938
[2025-11-23 22:40:30] 2025-11-24 03:39:40,768 | INFO     | intersect: -17422514262.349415
[2025-11-23 22:40:30] 2025-11-24 03:39:40,769 | INFO     | chi2: 18.39472274606152
[2025-11-23 22:40:30] 2025-11-24 03:39:40,769 | INFO     | current chi2=18.39472274606152 (change=17.174822930817623 %)
[2025-11-23 22:40:30] 2025-11-24 03:39:40,769 | INFO     | right removable region: 740
[2025-11-23 22:40:30] 2025-11-24 03:39:40,769 | INFO     | sum of square deviations: 126159075655.67082
[2025-11-23 22:40:30] 2025-11-24 03:39:40,776 | INFO     | sum of deviations: 679923099991.269
[2025-11-23 22:40:30] 2025-11-24 03:39:40,776 | INFO     | mean x: 1763932936.2361674
[2025-11-23 22:40:30] 2025-11-24 03:39:40,776 | INFO     | mean y: 2841803.221322537
[2025-11-23 22:40:30] 2025-11-24 03:39:40,776 | INFO     | intersect: -9503717625.414492
[2025-11-23 22:40:30] 2025-11-24 03:39:40,777 | INFO     | chi2: 17.755428953630922
[2025-11-23 22:40:30] 2025-11-24 03:39:40,777 | INFO     | current chi2=17.755428953630922 (change=20.05334533576284 %)
[2025-11-23 22:40:30] 2025-11-24 03:39:40,777 | INFO     | left removable region: 10
[2025-11-23 22:40:30] 2025-11-24 03:39:40,777 | INFO     | sum of square deviations: 120623520747.10828
[2025-11-23 22:40:30] 2025-11-24 03:39:40,784 | INFO     | sum of deviations: 725367741208.4086
[2025-11-23 22:40:30] 2025-11-24 03:39:40,784 | INFO     | mean x: 1763932905.7547946
[2025-11-23 22:40:30] 2025-11-24 03:39:40,784 | INFO     | mean y: 2877987.4547945205
[2025-11-23 22:40:30] 2025-11-24 03:39:40,784 | INFO     | intersect: -10604506207.31647
[2025-11-23 22:40:30] 2025-11-24 03:39:40,784 | INFO     | chi2: 9.40078519926537
[2025-11-23 22:40:30] 2025-11-24 03:39:40,785 | INFO     | current memory leak: 6.01 B/s (using 730 data points, chi2=9.40)
[2025-11-23 22:40:30] 2025-11-24 03:39:40,785 | INFO     | could have reported an average CPU frequency of 3799 MHz (28 samples)
[2025-11-23 22:40:30] 2025-11-24 03:39:40,785 | INFO     | ..............................
[2025-11-23 22:40:30] 2025-11-24 03:39:40,785 | INFO     | . Timing measurements:
[2025-11-23 22:40:30] 2025-11-24 03:39:40,786 | INFO     | . get job = 0 s
[2025-11-23 22:40:30] 2025-11-24 03:39:40,786 | INFO     | . initial setup = 4 s
[2025-11-23 22:40:30] 2025-11-24 03:39:40,786 | INFO     | . payload setup = 57 s
[2025-11-23 22:40:30] 2025-11-24 03:39:40,786 | INFO     | . stage-in = 0 s
[2025-11-23 22:40:30] 2025-11-24 03:39:40,786 | INFO     | . payload execution = 45512 s
[2025-11-23 22:40:30] 2025-11-24 03:39:40,786 | INFO     | . stage-out = 6 s
[2025-11-23 22:40:30] 2025-11-24 03:39:40,786 | INFO     | . log creation = 2 s
[2025-11-23 22:40:30] 2025-11-24 03:39:40,786 | INFO     | ..............................
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | 
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | job summary report
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | --------------------------------------------------
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | PanDA job id: 6895336158
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | task id: 47556137
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | errors: (none)
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | pilot state: finished 
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | transexitcode: 0
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | exeerrorcode: 0
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | exeerrordiag: 
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | exitcode: 0
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | exitmsg: OK
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | cpuconsumptiontime: 138203 s
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | nevents: 1000
[2025-11-23 22:40:30] 2025-11-24 03:39:40,883 | INFO     | neventsw: 0
[2025-11-23 22:40:30] 2025-11-24 03:39:40,884 | INFO     | pid: 925845
[2025-11-23 22:40:30] 2025-11-24 03:39:40,884 | INFO     | pgrp: 925845
[2025-11-23 22:40:30] 2025-11-24 03:39:40,884 | INFO     | corecount: 8
[2025-11-23 22:40:30] 2025-11-24 03:39:40,884 | INFO     | event service: False
[2025-11-23 22:40:30] 2025-11-24 03:39:40,884 | INFO     | sizes: {0: 2298635, 1: 2298834, 12: 2298834, 23: 2298862, 34: 2298890, 35: 2299180, 45: 2299336, 45575: 2344901, 45582: 2353895, 45583: 2353951, 45621: 2354197}
[2025-11-23 22:40:30] 2025-11-24 03:39:40,884 | INFO     | --------------------------------------------------
[2025-11-23 22:40:30] 2025-11-24 03:39:40,890 | INFO     | 
[2025-11-23 22:40:30] 2025-11-24 03:39:40,890 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-23 22:40:30] 2025-11-24 03:39:40,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:40:30] 2025-11-24 03:39:40,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,912 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:40:30] 2025-11-24 03:39:40,912 | INFO     | job 6895336158 has completed (purged errors)
[2025-11-23 22:40:30] 2025-11-24 03:39:40,912 | INFO     | overall cleanup function is called
[2025-11-23 22:40:30] 2025-11-24 03:39:41,688 | INFO     | PID=881727 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 22:40:30] 2025-11-24 03:39:41,689 | INFO     | .. there are 72 such processes running
[2025-11-23 22:40:30] 2025-11-24 03:39:41,973 | INFO     | --- collectZombieJob: --- 10, [925845]
[2025-11-23 22:40:30] 2025-11-24 03:39:41,973 | INFO     | zombie collector waiting for pid 925845
[2025-11-23 22:40:30] 2025-11-24 03:39:41,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:40:30] 2025-11-24 03:39:41,973 | INFO     | collected zombie processes
[2025-11-23 22:40:30] 2025-11-24 03:39:41,974 | INFO     | will attempt to kill all subprocesses of pid=925845
[2025-11-23 22:40:30] 2025-11-24 03:39:43,112 | INFO     | process IDs to be killed: [925845] (in reverse order)
[2025-11-23 22:40:30] 2025-11-24 03:39:43,569 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:40:30] 2025-11-24 03:39:43,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:40:30] 2025-11-24 03:39:43,642 | INFO     | did not find any defunct processes belonging to 925845
[2025-11-23 22:40:30] 2025-11-24 03:39:43,706 | INFO     | did not find any defunct processes belonging to 925845
[2025-11-23 22:40:30] 2025-11-24 03:39:43,709 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:40:30] 2025-11-24 03:39:43,710 | INFO     | ready for new job
[2025-11-23 22:40:30] 2025-11-24 03:39:43,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:40:30] 2025-11-24 03:39:43,717 | INFO     | ***************************************
[2025-11-23 22:40:30] 2025-11-24 03:39:43,717 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:40:30] 2025-11-24 03:39:43,717 | INFO     | ***************************************
[2025-11-23 22:40:30] 2025-11-24 03:39:43,717 | INFO     | 
[2025-11-23 22:40:30] 2025-11-24 03:39:43,726 | INFO     | architecture information:
[2025-11-23 22:40:30] 2025-11-24 03:39:43,737 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:40:30] 2025-11-24 03:39:43,813 | INFO     | cat /etc/os-release:
[2025-11-23 22:40:30] NAME="CentOS Linux"
[2025-11-23 22:40:30] VERSION="7 (Core)"
[2025-11-23 22:40:30] ID="centos"
[2025-11-23 22:40:30] ID_LIKE="rhel fedora"
[2025-11-23 22:40:30] VERSION_ID="7"
[2025-11-23 22:40:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:40:30] ANSI_COLOR="0;31"
[2025-11-23 22:40:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:40:30] HOME_URL="https://www.centos.org/"
[2025-11-23 22:40:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:40:30] 
[2025-11-23 22:40:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:40:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:40:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:40:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:40:30] 
[2025-11-23 22:40:30] 2025-11-24 03:39:43,813 | INFO     | ***************************************
[2025-11-23 22:40:30] 2025-11-24 03:39:44,318 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-23 22:40:30] 2025-11-24 03:39:44,412 | INFO     | sufficient remaining disk space (61787340800 B)
[2025-11-23 22:40:30] 2025-11-24 03:39:44,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:40:30] 2025-11-24 03:39:44,412 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:40:30] 2025-11-24 03:39:44,412 | INFO     | update_server=False
[2025-11-23 22:40:30] 2025-11-24 03:39:44,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:40:30] 2025-11-24 03:39:44,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:40:30] 2025-11-24 03:39:44,781 | INFO     | all data control threads have been joined
[2025-11-23 22:40:30] 2025-11-24 03:39:45,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:40:30] 2025-11-24 03:39:45,201 | INFO     | aborting loop
[2025-11-23 22:40:30] 2025-11-24 03:39:45,420 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:45,439 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:45,486 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:45,488 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:45,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:40:30] 2025-11-24 03:39:45,555 | INFO     | all payload control threads have been joined
[2025-11-23 22:40:30] 2025-11-24 03:39:45,787 | INFO     | [data] control thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:45,857 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:45,858 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:45,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:40:30] 2025-11-24 03:39:46,060 | INFO     | [job] validate thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:46,084 | INFO     | all job control threads have been joined
[2025-11-23 22:40:30] 2025-11-24 03:39:46,210 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:46,232 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:46,310 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:46,561 | INFO     | [payload] control thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:46,692 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:46,903 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:47,090 | INFO     | [job] control thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:39:49,558 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:40:30] 2025-11-24 03:40:15,491 | INFO     | PID=881727 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 22:40:30] 2025-11-24 03:40:15,492 | INFO     | .. there are 72 such processes running
[2025-11-23 22:40:30] 2025-11-24 03:40:15,492 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:40:30] 2025-11-24 03:40:15,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:40:30] 2025-11-24 03:40:15,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:40:30] 2025-11-24 03:40:22,577 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:40:30] 2025-11-24 03:40:23,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819772917568)>', '<ExcThread(monitor, started 139819271304960)>']
[2025-11-23 22:40:30] 2025-11-24 03:40:23,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:40:30] 2025-11-24 03:40:23,538 | INFO     | [monitor] control thread has ended
[2025-11-23 22:40:30] 2025-11-24 03:40:28,498 | INFO     | all workflow threads have been joined
[2025-11-23 22:40:30] 2025-11-24 03:40:28,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:40:30] 2025-11-24 03:40:28,499 | INFO     | traces error code: 0
[2025-11-23 22:40:30] 2025-11-24 03:40:28,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:40:30] 2025-11-24 03:40:29,380 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:40:30] 2025-11-24 03:40:29,419 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:40:30] 2025-11-24 03:40:29,440 [wrapper] pilotpid: 881727
[2025-11-23 22:40:30] 2025-11-24 03:40:29,476 [wrapper] Pilot exit status: 0
[2025-11-23 22:40:30] 2025-11-24 03:40:29,586 [wrapper] pandaids: 6895336158
[2025-11-23 22:40:30] 2025-11-24 03:40:30,253 [wrapper] cleanup supervisor_pilot 3060072 881730
[2025-11-23 22:40:30] 2025-11-24 03:40:30,288 [wrapper] Test setup, not cleaning
[2025-11-23 22:40:30] 2025-11-24 03:40:30,327 [wrapper] apfmon messages muted
[2025-11-23 22:40:30] 2025-11-24 03:40:30,423 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:40:30] 2025-11-24 03:40:30,451 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:40:30]  *** Error codes and diagnostics ***
[2025-11-23 22:40:30]     "exeErrorCode": 0,
[2025-11-23 22:40:30]     "exeErrorDiag": "",
[2025-11-23 22:40:30]     "pilotErrorCode": 0,
[2025-11-23 22:40:30]     "pilotErrorDiag": "",
[2025-11-23 22:40:30]  *** Listing of results directory ***
[2025-11-23 22:40:30] total 1316524
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:12 pilot3.tar.gz
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 00:14 queuedata.json
[2025-11-23 22:40:30] -rwx------. 1 boincer umatlas     36292 Nov 22 00:15 runpilot2-wrapper.sh
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas       100 Nov 23 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:40:30] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 09:56 run_atlas
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas       105 Nov 23 09:56 job.xml
[2025-11-23 22:40:30] -rw-r--r--. 2 boincer umatlas 410365095 Nov 23 09:56 EVNT.47483658._000273.pool.root.1
[2025-11-23 22:40:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 09:56 start_atlas.sh
[2025-11-23 22:40:30] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 09:56 shared
[2025-11-23 22:40:30] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 09:56 input.tar.gz
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas         0 Nov 23 09:56 boinc_lockfile
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 09:56 pandaJob.out
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas        57 Nov 23 09:56 setup.sh.local
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas    989785 Nov 23 09:57 agis_schedconf.cvmfs.json
[2025-11-23 22:40:30] drwx------. 5 boincer umatlas      4096 Nov 23 09:58 pilot3
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas       533 Nov 23 22:20 boinc_task_state.xml
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas 918605189 Nov 23 22:38 HITS.47556137._002692.pool.root.1
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas      1054 Nov 23 22:38 memory_monitor_summary.json
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas   1526164 Nov 23 22:38 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas   1930151 Nov 23 22:39 log.47556137._002692.job.log.tgz.1
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas      8590 Nov 23 22:39 heartbeat.json
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas        95 Nov 23 22:39 pilot_heartbeat.json
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas      7171 Nov 23 22:40 init_data.xml
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas      4823 Nov 23 22:40 pilotlog.txt
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas        29 Nov 23 22:40 wrapper_checkpoint.txt
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 22:40 boinc_mmap_file
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas   5682074 Nov 23 22:40 log.47556137._002692.job.log.1
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas       353 Nov 23 22:40 output.list
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas       620 Nov 23 22:40 runtime_log
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas   7628800 Nov 23 22:40 result.tar.gz
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas      9338 Nov 23 22:40 runtime_log.err
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas       660 Nov 23 22:40 jFWKDmh9ug8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4xHKDm7vyjAo.diag
[2025-11-23 22:40:30] -rw-r--r--. 1 boincer umatlas     21881 Nov 23 22:40 stderr.txt
[2025-11-23 22:40:30] HITS file was successfully produced:
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas 918605189 Nov 23 22:38 shared/HITS.pool.root.1
[2025-11-23 22:40:30]  *** Contents of shared directory: ***
[2025-11-23 22:40:30] total 1305880
[2025-11-23 22:40:30] -rw-r--r--. 2 boincer umatlas 410365095 Nov 23 09:56 ATLAS.root_0
[2025-11-23 22:40:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 09:56 start_atlas.sh
[2025-11-23 22:40:30] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 09:56 input.tar.gz
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas 918605189 Nov 23 22:38 HITS.pool.root.1
[2025-11-23 22:40:30] -rw-------. 1 boincer umatlas   7628800 Nov 23 22:40 result.tar.gz
22:40:32 (869616): run_atlas exited; CPU time 138968.916546
22:40:32 (869616): called boinc_finish(0)

</stderr_txt>
]]>

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