Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:40:54 (1234765): wrapper (7.7.26015): starting
06:40:54 (1234765): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 06:40:54] Arguments: --nthreads 12
[2025-11-23 06:40:54] Threads: 12
[2025-11-23 06:40:54] Checking for CVMFS
[2025-11-23 06:40:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 06:40:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 06:40:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 06:40:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 06:40:55] 2.11.5.0 2756331 24155 326916 153211 2 221 37387288 45568001 15835 130560 0 184610706 99.791 109509956 23672 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-23 06:40:55] CVMFS is ok
[2025-11-23 06:40:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 06:40:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 06:40:55] Further information can be found at the LHC@home message board.
[2025-11-23 06:40:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 06:40:55] Checking for apptainer binary...
[2025-11-23 06:40:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 06:40:55] Running /usr/bin/apptainer --version
[2025-11-23 06:40:55] apptainer version 1.4.1-1.el9
[2025-11-23 06:40:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 06:40:55] wns0075.triumf.lcg
[2025-11-23 06:40:55] apptainer works
[2025-11-23 06:40:55] Set ATHENA_PROC_NUMBER=12
[2025-11-23 06:40:55] Set ATHENA_CORE_NUMBER=12
[2025-11-23 06:40:55] Starting ATLAS job with PandaID=6895352849
[2025-11-23 06:40:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 06:45:37]  *** The last 200 lines of the pilot log: ***
[2025-11-23 06:45:37] 2025-11-23 14:45:04,626 | WARNING  | wrong length of table data, x=[1763908900.0, 1763908961.0], y=[792.0, 593300.0] (must be same and length>=4)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | could have reported an average CPU frequency of 1496 MHz (4 samples)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | ..............................
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . Timing measurements:
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . get job = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . initial setup = 3 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . payload setup = 7 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . stage-in = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . payload execution = 83 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . stage-out = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | . log creation = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | ..............................
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895352849/pilotlog.txt
[2025-11-23 06:45:37] 2025-11-23 14:45:04,642 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-23 06:45:37] - Log from pilotlog.txt -
[2025-11-23 06:45:37] 2025-11-23 14:45:04,623 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895352849/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,624 | INFO     | extracted standard info from prmon json
[2025-11-23 06:45:37] 2025-11-23 14:45:04,624 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 06:45:37] 2025-11-23 14:45:04,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 06:45:37] 2025-11-23 14:45:04,625 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 06:45:37] 2025-11-23 14:45:04,625 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 06:45:37] 2025-11-23 14:45:04,626 | WARNING  | wrong length of table data, x=[1763908900.0, 1763908961.0], y=[792.0, 593300.0] (must be same and length>=4)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | could have reported an average CPU frequency of 1496 MHz (4 samples)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | ..............................
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . Timing measurements:
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . get job = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . initial setup = 3 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . payload setup = 7 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . stage-in = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . payload execution = 83 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . stage-out = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | . log creation = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | ..............................
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895352849/pilotlog.txt
[2025-11-23 06:45:37] 2025-11-23 14:45:04,642 | WARNING  | 
[2025-11-23 06:45:37] [begin log extracts]
[2025-11-23 06:45:37] - Log from pilotlog.txt -
[2025-11-23 06:45:37] 2025-11-23 14:45:04,623 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895352849/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,624 | INFO     | extracted standard info from prmon json
[2025-11-23 06:45:37] 2025-11-23 14:45:04,624 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 06:45:37] 2025-11-23 14:45:04,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 06:45:37] 2025-11-23 14:45:04,625 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 06:45:37] 2025-11-23 14:45:04,625 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 06:45:37] 2025-11-23 14:45:04,626 | WARNING  | wrong length of table data, x=[1763908900.0, 1763908961.0], y=[792.0, 593300.0] (must be same and length>=4)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | could have reported an average CPU frequency of 1496 MHz (4 samples)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | ..............................
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . Timing measurements:
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . get job = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . initial setup = 3 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . payload setup = 7 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . stage-in = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . payload execution = 83 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,627 | INFO     | . stage-out = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | . log creation = 0 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | ..............................
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 06:45:37] 2025-11-23 14:45:04,628 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895352849/pilotlog.txt
[2025-11-23 06:45:37] [end log extracts]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,643 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,644 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-23 06:45:37] 2025-11-23 14:45:04,737 | INFO     | 
[2025-11-23 06:45:37] 2025-11-23 14:45:04,737 | INFO     | job summary report
[2025-11-23 06:45:37] 2025-11-23 14:45:04,737 | INFO     | --------------------------------------------------
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | PanDA job id: 6895352849
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | task id: 47556137
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-23 06:42:51,914 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | pilot state: failed 
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | transexitcode: 65
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | exeerrorcode: 65
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | exitcode: 65
[2025-11-23 06:45:37] 2025-11-23 14:45:04,738 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | cpuconsumptiontime: 68 s
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | nevents: 0
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | neventsw: 0
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | pid: 1245038
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | pgrp: 1245038
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | corecount: 12
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | event service: False
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | sizes: {0: 2298626, 1: 2298825, 6: 2299087, 11: 2299115, 94: 2324509, 95: 2328799, 98: 2328955, 220: 2329121}
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | --------------------------------------------------
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | 
[2025-11-23 06:45:37] 2025-11-23 14:45:04,739 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-23 06:45:37] 2025-11-23 14:45:04,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,758 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,760 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 06:45:37] 2025-11-23 14:45:04,760 | INFO     | job 6895352849 has completed (purged errors)
[2025-11-23 06:45:37] 2025-11-23 14:45:04,761 | INFO     | overall cleanup function is called
[2025-11-23 06:45:37] 2025-11-23 14:45:05,769 | INFO     | --- collectZombieJob: --- 10, [1245038]
[2025-11-23 06:45:37] 2025-11-23 14:45:05,769 | INFO     | zombie collector waiting for pid 1245038
[2025-11-23 06:45:37] 2025-11-23 14:45:05,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 06:45:37] 2025-11-23 14:45:05,769 | INFO     | collected zombie processes
[2025-11-23 06:45:37] 2025-11-23 14:45:05,769 | INFO     | will attempt to kill all subprocesses of pid=1245038
[2025-11-23 06:45:37] 2025-11-23 14:45:06,075 | INFO     | process IDs to be killed: [1245038] (in reverse order)
[2025-11-23 06:45:37] 2025-11-23 14:45:06,185 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 06:45:37] 2025-11-23 14:45:06,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 06:45:37] 2025-11-23 14:45:06,197 | INFO     | did not find any defunct processes belonging to 1245038
[2025-11-23 06:45:37] 2025-11-23 14:45:06,208 | INFO     | did not find any defunct processes belonging to 1245038
[2025-11-23 06:45:37] 2025-11-23 14:45:06,210 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 06:45:37] 2025-11-23 14:45:06,210 | INFO     | ready for new job
[2025-11-23 06:45:37] 2025-11-23 14:45:06,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 06:45:37] 2025-11-23 14:45:06,212 | INFO     | ***************************************
[2025-11-23 06:45:37] 2025-11-23 14:45:06,212 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 06:45:37] 2025-11-23 14:45:06,212 | INFO     | ***************************************
[2025-11-23 06:45:37] 2025-11-23 14:45:06,212 | INFO     | 
[2025-11-23 06:45:37] 2025-11-23 14:45:06,215 | INFO     | architecture information:
[2025-11-23 06:45:37] 2025-11-23 14:45:06,216 | INFO     | executing command: cat /etc/os-release
[2025-11-23 06:45:37] 2025-11-23 14:45:06,229 | INFO     | cat /etc/os-release:
[2025-11-23 06:45:37] NAME="CentOS Linux"
[2025-11-23 06:45:37] VERSION="7 (Core)"
[2025-11-23 06:45:37] ID="centos"
[2025-11-23 06:45:37] ID_LIKE="rhel fedora"
[2025-11-23 06:45:37] VERSION_ID="7"
[2025-11-23 06:45:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 06:45:37] ANSI_COLOR="0;31"
[2025-11-23 06:45:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 06:45:37] HOME_URL="https://www.centos.org/"
[2025-11-23 06:45:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 06:45:37] 
[2025-11-23 06:45:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 06:45:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 06:45:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 06:45:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 06:45:37] 
[2025-11-23 06:45:37] 2025-11-23 14:45:06,230 | INFO     | ***************************************
[2025-11-23 06:45:37] 2025-11-23 14:45:06,732 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-23 06:45:37] 2025-11-23 14:45:06,748 | INFO     | sufficient remaining disk space (1367812866048 B)
[2025-11-23 06:45:37] 2025-11-23 14:45:06,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 06:45:37] 2025-11-23 14:45:06,749 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 06:45:37] 2025-11-23 14:45:06,749 | INFO     | update_server=False
[2025-11-23 06:45:37] 2025-11-23 14:45:06,749 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 06:45:37] 2025-11-23 14:45:06,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 06:45:37] 2025-11-23 14:45:06,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:45:37] 2025-11-23 14:45:06,749 | INFO     | aborting loop
[2025-11-23 06:45:37] 2025-11-23 14:45:06,773 | INFO     | all payload control threads have been joined
[2025-11-23 06:45:37] 2025-11-23 14:45:07,184 | INFO     | all data control threads have been joined
[2025-11-23 06:45:37] 2025-11-23 14:45:07,754 | INFO     | [job] retrieve thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:07,755 | INFO     | [job] job monitor thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:07,778 | INFO     | [payload] control thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:07,802 | INFO     | all job control threads have been joined
[2025-11-23 06:45:37] 2025-11-23 14:45:07,935 | INFO     | [monitor] cgroup control has ended
[2025-11-23 06:45:37] 2025-11-23 14:45:08,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 06:45:37] 2025-11-23 14:45:08,150 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:08,190 | INFO     | [data] control thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:08,533 | INFO     | [job] validate thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:08,587 | INFO     | [data] copytool_in thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:08,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:08,713 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:08,771 | INFO     | [payload] failed_post thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:08,806 | INFO     | [job] control thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:08,977 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:09,230 | INFO     | [payload] validate_post thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:09,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 06:45:37] 2025-11-23 14:45:10,080 | INFO     | [data] copytool_out thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:10,754 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:10,758 | INFO     | [job] queue monitor thread has finished
[2025-11-23 06:45:37] 2025-11-23 14:45:12,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676220938048)>', '<ExcThread(monitor, started 140675546871552)>']
[2025-11-23 06:45:37] 2025-11-23 14:45:17,425 | INFO     | all workflow threads have been joined
[2025-11-23 06:45:37] 2025-11-23 14:45:17,426 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 06:45:37] 2025-11-23 14:45:17,427 | INFO     | traces error code: 0
[2025-11-23 06:45:37] 2025-11-23 14:45:17,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 06:45:37] 2025-11-23 14:45:37,579 | INFO     | PID=1238418 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 06:45:37] 2025-11-23 14:45:37,580 | INFO     | .. there are 28 such processes running
[2025-11-23 06:45:37] 2025-11-23 14:45:37,581 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 06:45:37] 2025-11-23 14:45:37,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 06:45:37] 2025-11-23 14:45:37,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 06:45:37] 2025-11-23 14:45:37,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 06:45:37] 2025-11-23 14:45:37,581 | CRITICAL | thread 'MainThread' is not alive
[2025-11-23 06:45:37] 2025-11-23 14:45:37,581 | INFO     | [monitor] control thread has ended
[2025-11-23 06:45:37] 2025-11-23 14:45:37,730 [wrapper] ==== pilot stdout END ====
[2025-11-23 06:45:37] 2025-11-23 14:45:37,733 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 06:45:37] 2025-11-23 14:45:37,736 [wrapper] pilotpid: 1238418
[2025-11-23 06:45:37] 2025-11-23 14:45:37,739 [wrapper] Pilot exit status: 0
[2025-11-23 06:45:37] 2025-11-23 14:45:37,749 [wrapper] pandaids: 6895352849
[2025-11-23 06:45:37] 2025-11-23 14:45:37,818 [wrapper] cleanup supervisor_pilot 1238424 1238419
[2025-11-23 06:45:37] 2025-11-23 14:45:37,821 [wrapper] Test setup, not cleaning
[2025-11-23 06:45:37] 2025-11-23 14:45:37,824 [wrapper] apfmon messages muted
[2025-11-23 06:45:37] 2025-11-23 14:45:37,827 [wrapper] ==== wrapper stdout END ====
[2025-11-23 06:45:37] 2025-11-23 14:45:37,829 [wrapper] ==== wrapper stderr END ====
[2025-11-23 06:45:37]  *** Error codes and diagnostics ***
[2025-11-23 06:45:37]     "exeErrorCode": 65,
[2025-11-23 06:45:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-23 06:45:37]     "pilotErrorCode": 1305,
[2025-11-23 06:45:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-23 06:45:37]  *** Listing of results directory ***
[2025-11-23 06:45:37] total 405968
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc    576529 Nov 22 19:47 pilot3.tar.gz
[2025-11-23 06:45:37] -rwx------. 1 boinc boinc     36292 Nov 22 20:18 runpilot2-wrapper.sh
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc      5112 Nov 22 20:18 queuedata.json
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc       100 Nov 23 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 06:45:37] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 06:40 run_atlas
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc       105 Nov 23 06:40 job.xml
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc      6594 Nov 23 06:40 init_data.xml
[2025-11-23 06:45:37] -rw-r--r--. 2 boinc boinc 411514208 Nov 23 06:40 EVNT.47483658._000607.pool.root.1
[2025-11-23 06:45:37] -rw-r--r--. 2 boinc boinc     15847 Nov 23 06:40 start_atlas.sh
[2025-11-23 06:45:37] drwxrwx--x. 2 boinc boinc      4096 Nov 23 06:40 shared
[2025-11-23 06:45:37] -rw-r--r--. 2 boinc boinc    590099 Nov 23 06:40 input.tar.gz
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc         0 Nov 23 06:40 boinc_lockfile
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc      2782 Nov 23 06:40 pandaJob.out
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc    989785 Nov 23 06:41 agis_schedconf.cvmfs.json
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc   1526164 Nov 23 06:41 agis_ddmendpoints.agis.ALL.json
[2025-11-23 06:45:37] drwx------. 5 boinc boinc      4096 Nov 23 06:41 pilot3
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc       524 Nov 23 06:42 boinc_task_state.xml
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc      1012 Nov 23 06:42 memory_monitor_summary.json
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc     48091 Nov 23 06:42 log.47556137._006021.job.log.tgz.1
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc     10333 Nov 23 06:45 heartbeat.json
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc      8192 Nov 23 06:45 boinc_mmap_file
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc        23 Nov 23 06:45 wrapper_checkpoint.txt
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc        95 Nov 23 06:45 pilot_heartbeat.json
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc       893 Nov 23 06:45 pilotlog.txt
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc     96622 Nov 23 06:45 log.47556137._006021.job.log.1
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc       186 Nov 23 06:45 output.list
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc       620 Nov 23 06:45 runtime_log
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc    163840 Nov 23 06:45 result.tar.gz
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc      8636 Nov 23 06:45 runtime_log.err
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc       645 Nov 23 06:45 1wONDmDjGh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoQIKDm40Z6Ho.diag
[2025-11-23 06:45:37] -rw-r--r--. 1 boinc boinc     22466 Nov 23 06:45 stderr.txt
[2025-11-23 06:45:37] No HITS result produced
[2025-11-23 06:45:37]  *** Contents of shared directory: ***
[2025-11-23 06:45:37] total 402628
[2025-11-23 06:45:37] -rw-r--r--. 2 boinc boinc 411514208 Nov 23 06:40 ATLAS.root_0
[2025-11-23 06:45:37] -rw-r--r--. 2 boinc boinc     15847 Nov 23 06:40 start_atlas.sh
[2025-11-23 06:45:37] -rw-r--r--. 2 boinc boinc    590099 Nov 23 06:40 input.tar.gz
[2025-11-23 06:45:37] -rw-------. 1 boinc boinc    163840 Nov 23 06:45 result.tar.gz
06:45:39 (1234765): run_atlas exited; CPU time 66.256494
06:45:39 (1234765): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN