Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-30 09:04:40 (21352): vboxwrapper version 26210
2025-11-30 09:04:40 (21352): BOINC client version: 8.0.2
2025-11-30 09:04:41 (21352): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-11-30 09:04:41 (21352): Successfully copied 'init_data.xml' to the shared directory.
2025-11-30 09:04:42 (21352): Create VM. (boinc_79be5ab2836f257f, slot#1)
2025-11-30 09:04:42 (21352): Setting Memory Size for VM. (4400MB)
2025-11-30 09:04:42 (21352): Setting CPU Count for VM. (4)
2025-11-30 09:04:43 (21352): Setting Chipset Options for VM.
2025-11-30 09:04:43 (21352): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-30 09:04:43 (21352): Setting Boot Options for VM.
2025-11-30 09:04:44 (21352): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-30 09:04:44 (21352): Enabling VM Network Access.
2025-11-30 09:04:44 (21352): Disabling USB Support for VM.
2025-11-30 09:04:44 (21352): Disabling COM Port Support for VM.
2025-11-30 09:04:45 (21352): Disabling LPT Port Support for VM.
2025-11-30 09:04:45 (21352): Disabling Audio Support for VM.
2025-11-30 09:04:45 (21352): Disabling Clipboard Support for VM.
2025-11-30 09:04:45 (21352): Disabling Drag and Drop Support for VM.
2025-11-30 09:04:46 (21352): Adding storage controller(s) to VM.
2025-11-30 09:04:46 (21352): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-30 09:04:48 (21352): Adding VirtualBox Guest Additions to VM.
2025-11-30 09:04:48 (21352): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-30 09:04:48 (21352): forwarding host port 54522 to guest port 80
2025-11-30 09:04:49 (21352): Enabling remote desktop for VM.
2025-11-30 09:04:49 (21352): Enabling shared directory for VM.
2025-11-30 09:04:50 (21352): Starting VM using VBoxManage interface. (boinc_79be5ab2836f257f, slot#1)
2025-11-30 09:04:54 (21352): Successfully started VM. (PID = '23820')
2025-11-30 09:04:54 (21352): Reporting VM Process ID to BOINC.
2025-11-30 09:04:54 (21352): Guest Log: BIOS: VirtualBox 7.0.6
2025-11-30 09:04:54 (21352): Guest Log: CPUID EDX: 0x178bfbff
2025-11-30 09:04:54 (21352): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-30 09:04:54 (21352): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-30 09:04:54 (21352): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-30 09:04:54 (21352): Detected: Web Application Enabled (http://localhost:54522)
2025-11-30 09:04:54 (21352): Detected: Remote Desktop Enabled (localhost:54523)
2025-11-30 09:04:54 (21352): Preference change detected
2025-11-30 09:04:54 (21352): Setting CPU throttle for VM. (100%)
2025-11-30 09:04:54 (21352): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-30 09:04:56 (21352): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-30 09:04:56 (21352): Guest Log: BIOS: Booting from Hard Disk...
2025-11-30 09:04:58 (21352): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-30 09:04:58 (21352): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-30 09:04:58 (21352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-30 09:05:03 (21352): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-30 09:05:03 (21352): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-30 09:05:06 (21352): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-30 09:05:06 (21352): Guest Log: 00:00:00.000056 main     Log opened 2025-11-30T09:05:04.390095000Z
2025-11-30 09:05:06 (21352): Guest Log: 00:00:00.000106 main     OS Product: Linux
2025-11-30 09:05:06 (21352): Guest Log: 00:00:00.000117 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-30 09:05:06 (21352): Guest Log: 00:00:00.000126 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-30 09:05:06 (21352): Guest Log: 00:00:00.000136 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-30 09:05:06 (21352): Guest Log: 00:00:00.000136 main     Process ID: 1305
2025-11-30 09:05:06 (21352): Guest Log: 00:00:00.000136 main     Package type: LINUX_64BITS_GENERIC
2025-11-30 09:05:06 (21352): Guest Log: 00:00:00.000507 main     5.2.32 r132073 started. Verbose level = 0
2025-11-30 09:05:06 (21352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-30 09:05:06 (21352): Guest Log: [INFO] Mounting shared directory
2025-11-30 09:05:06 (21352): Guest Log: [INFO] Checking for init_data.xml
2025-11-30 09:05:08 (21352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-30 09:05:08 (21352): Guest Log: [INFO] Detected branch: prod
2025-11-30 09:05:08 (21352): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-30 09:05:08 (21352): Guest Log: Copying input files
2025-11-30 09:05:09 (21352): Guest Log: Copied input files into RunAtlas.
2025-11-30 09:05:09 (21352): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-30 09:05:09 (21352): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-30 09:05:09 (21352): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-30 09:05:09 (21352): Guest Log: Further information can be found at the LHC@home message board.
2025-11-30 09:05:15 (21352): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-30 09:05:16 (21352): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-30 09:05:16 (21352): Guest Log: 2.6.3.0 1581 0 30148 153473 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-30 09:05:16 (21352): Guest Log: 00:00:10.001489 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 532 774 000ns (GuestNow=1 764 489 915 858 368 000 ns GuestLast=1 764 493 504 391 142 000 ns fSetTimeLastLoop=true )
2025-11-30 09:05:16 (21352): Guest Log: copied the webapp to /var/www
2025-11-30 09:05:16 (21352): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-30 09:05:16 (21352): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-30 09:05:16 (21352): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-30 09:05:16 (21352): Guest Log:  *** Starting ATLAS job. (PandaID=6895345432 taskID=47556137) ***
2025-11-30 09:14:05 (21352): VM state change detected. (old = 'running', new = 'paused')
2025-11-30 09:16:05 (21352): VM state change detected. (old = 'paused', new = 'running')
2025-11-30 10:46:57 (21352): Status Report: Elapsed Time: '6000.000000'
2025-11-30 10:46:57 (21352): Status Report: CPU Time: '22908.343750'
2025-11-30 12:18:21 (21352): VM state change detected. (old = 'running', new = 'paused')
2025-11-30 12:27:30 (21352): VM state change detected. (old = 'paused', new = 'running')
2025-11-30 12:36:09 (21352): Status Report: Elapsed Time: '12000.000000'
2025-11-30 12:36:09 (21352): Status Report: CPU Time: '46870.843750'
2025-11-30 13:25:20 (21352): VM state change detected. (old = 'running', new = 'paused')
2025-11-30 13:49:14 (21352): VM state change detected. (old = 'paused', new = 'running')
2025-11-30 13:49:26 (21352): Guest Log: 04:09:23.815884 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 106 012 035 000ns (GuestNow=1 764 506 965 683 903 000 ns GuestLast=1 764 504 859 671 868 000 ns fSetTimeLastLoop=true )
2025-11-30 14:40:06 (21352): Status Report: Elapsed Time: '18000.000000'
2025-11-30 14:40:06 (21352): Status Report: CPU Time: '70815.609375'
2025-11-30 16:20:07 (21352): Status Report: Elapsed Time: '24000.000000'
2025-11-30 16:20:07 (21352): Status Report: CPU Time: '94776.640625'
2025-11-30 18:00:11 (21352): Status Report: Elapsed Time: '30000.000000'
2025-11-30 18:00:11 (21352): Status Report: CPU Time: '118738.609375'
2025-11-30 19:40:12 (21352): Status Report: Elapsed Time: '36000.000000'
2025-11-30 19:40:12 (21352): Status Report: CPU Time: '142698.015625'
2025-11-30 20:51:29 (21352): Guest Log:  *** Job finished ***
2025-11-30 20:51:29 (21352): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:16,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:16,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:21,236 | INFO     | [monitor] cgroup control has ended
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:23,216 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683199080256)>', '<ExcThread(monitor, started 140682744272640)>']
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:23,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:23,981 | INFO     | [monitor] control thread has ended
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,224 | INFO     | all workflow threads have been joined
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,224 | INFO     | end of generic workflow (traces error code: 0)
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,224 | INFO     | traces error code: 0
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,284 [wrapper] ==== pilot stdout END ====
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,286 [wrapper] ==== wrapper stdout RESUME ====
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,288 [wrapper] pilotpid: 5956
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,289 [wrapper] Pilot exit status: 0
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,296 [wrapper] pandaids: 6895345432
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,309 [wrapper] cleanup supervisor_pilot 25307 5957
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,311 [wrapper] Test setup, not cleaning
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,313 [wrapper] apfmon messages muted
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,314 [wrapper] ==== wrapper stdout END ====
2025-11-30 20:51:29 (21352): Guest Log: 2025-11-30 19:51:28,316 [wrapper] ==== wrapper stderr END ====
2025-11-30 20:51:29 (21352): Guest Log:  *** Error codes and diagnostics ***
2025-11-30 20:51:29 (21352): Guest Log:     "exeErrorCode": 0,
2025-11-30 20:51:29 (21352): Guest Log:     "exeErrorDiag": "",
2025-11-30 20:51:29 (21352): Guest Log:     "pilotErrorCode": 0,
2025-11-30 20:51:29 (21352): Guest Log:     "pilotErrorDiag": "",
2025-11-30 20:51:29 (21352): Guest Log:  *** Listing of results directory ***
2025-11-30 20:51:29 (21352): Guest Log: total 911100
2025-11-30 20:51:29 (21352): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 22 16:54 pilot3.tar.gz
2025-11-30 20:51:29 (21352): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 22 17:03 runpilot2-wrapper.sh
2025-11-30 20:51:29 (21352): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 22 17:03 queuedata.json
2025-11-30 20:51:29 (21352): Guest Log: -rwxr-xr-x. 1 atlas atlas      9013 Nov 30 08:05 init_data.xml
2025-11-30 20:51:29 (21352): Guest Log: -rwxr-xr-x. 1 atlas atlas    590096 Nov 30 08:05 input.tar.gz
2025-11-30 20:51:29 (21352): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 30 08:05 start_atlas.sh
2025-11-30 20:51:29 (21352): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 30 08:05 EVNT.47483658._000443.pool.root.1 -> /data/./ATLAS.root_0
2025-11-30 20:51:29 (21352): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 30 08:05 pandaJob.out
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas    991772 Nov 30 08:05 agis_schedconf.cvmfs.json
2025-11-30 20:51:29 (21352): Guest Log: drwx------. 5 atlas atlas      4096 Nov 30 08:05 pilot3
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas 915500069 Nov 30 19:50 HITS.47556137._004385.pool.root.1
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 30 19:50 memory_monitor_summary.json
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 30 19:50 agis_ddmendpoints.agis.ALL.json
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas   1427462 Nov 30 19:50 log.47556137._004385.job.log.tgz.1
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas      8631 Nov 30 19:50 heartbeat.json
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas        97 Nov 30 19:51 pilot_heartbeat.json
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 30 19:51 pilotlog.txt
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas   5381123 Nov 30 19:51 log.47556137._004385.job.log.1
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas       353 Nov 30 19:51 output.list
2025-11-30 20:51:29 (21352): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 30 19:51 runtime_log
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas   6830080 Nov 30 19:51 result.tar.gz
2025-11-30 20:51:29 (21352): Guest Log: -rw-r--r--. 1 atlas atlas      8768 Nov 30 19:51 runtime_log.err
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas       668 Nov 30 19:51 DMQKDm6B6g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVIKKDmxknDpn.diag
2025-11-30 20:51:29 (21352): Guest Log: Looking for outputfile HITS.47556137._004385.pool.root.1
2025-11-30 20:51:29 (21352): Guest Log: HITS file was successfully produced
2025-11-30 20:51:29 (21352): Guest Log: -rw-------. 1 atlas atlas 915500069 Nov 30 19:50 /home/atlas/RunAtlas/HITS.47556137._004385.pool.root.1
2025-11-30 20:51:31 (21352): Guest Log: Successfully finished the ATLAS job!
2025-11-30 20:51:31 (21352): Guest Log: Copying the results back to the shared directory!
2025-11-30 20:51:31 (21352): Guest Log:  *** Contents of shared directory: ***
2025-11-30 20:51:31 (21352): Guest Log: total 1301340
2025-11-30 20:51:31 (21352): Guest Log: -rwxrwxrwx. 1 root root 409613046 Nov 30 08:04 ATLAS.root_0
2025-11-30 20:51:31 (21352): Guest Log: -rwxrwxrwx. 1 root root 915500069 Nov 30  2025 HITS.pool.root.1
2025-11-30 20:51:31 (21352): Guest Log: -rwxrwxrwx. 1 root root      9013 Nov 30 08:04 init_data.xml
2025-11-30 20:51:31 (21352): Guest Log: -rwxrwxrwx. 1 root root    590096 Nov 23 15:12 input.tar.gz
2025-11-30 20:51:31 (21352): Guest Log: -rwxrwxrwx. 1 root root   6830080 Nov 30  2025 result.tar.gz
2025-11-30 20:51:31 (21352): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 23 15:12 start_atlas.sh
2025-11-30 20:51:31 (21352): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-30 20:51:31 (21352): VM Completion File Detected.
2025-11-30 20:51:31 (21352): Powering off VM.
2025-11-30 20:51:32 (21352): Successfully stopped VM.
2025-11-30 20:51:32 (21352): Deregistering VM. (boinc_79be5ab2836f257f, slot#1)
2025-11-30 20:51:32 (21352): Removing network bandwidth throttle group from VM.
2025-11-30 20:51:32 (21352): Removing VM from VirtualBox.
2025-11-30 20:51:37 (21352): called boinc_finish(0)

</stderr_txt>
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