Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:18:37 (12857): wrapper (7.7.26015): starting
09:18:37 (12857): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 09:18:37] Arguments: --nthreads 8
[2025-11-23 09:18:37] Threads: 8
[2025-11-23 09:18:37] Checking for CVMFS
[2025-11-23 09:18:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 09:18:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 09:18:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 09:18:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 09:18:38] 2.11.2.0 2918 138276 88860 153211 1 71 12793105 20275200 1 130560 0 51832576 99.933 6332091 35029 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 09:18:38] CVMFS is ok
[2025-11-23 09:18:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 09:18:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 09:18:38] Further information can be found at the LHC@home message board.
[2025-11-23 09:18:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 09:18:38] Checking for apptainer binary...
[2025-11-23 09:18:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 09:18:38] Running /usr/bin/apptainer --version
[2025-11-23 09:18:38] apptainer version 1.3.2-1.el7
[2025-11-23 09:18:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 09:18:40] c-115-8.aglt2.org
[2025-11-23 09:18:40] apptainer works
[2025-11-23 09:18:40] Set ATHENA_PROC_NUMBER=8
[2025-11-23 09:18:40] Set ATHENA_CORE_NUMBER=8
[2025-11-23 09:18:40] Starting ATLAS job with PandaID=6895344255
[2025-11-23 09:18:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 20:59:12]  *** The last 200 lines of the pilot log: ***
[2025-11-23 20:59:13] 2025-11-24 01:58:34,038 | INFO     | time since job start (41977s) is within the limit (172800.0s)
[2025-11-23 20:59:13] 2025-11-24 01:58:36,043 | INFO     | time since job start (41979s) is within the limit (172800.0s)
[2025-11-23 20:59:13] 2025-11-24 01:58:36,201 | INFO     | monitor loop #3102: job 0:6895344255 is in state 'finished'
[2025-11-23 20:59:13] 2025-11-24 01:58:36,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,498 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 20:59:13] 2025-11-24 01:58:37,502 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-23 20:59:13] 2025-11-24 01:58:37,504 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895344255/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,505 | INFO     | extracted standard info from prmon json
[2025-11-23 20:59:13] 2025-11-24 01:58:37,505 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 20:59:13] 2025-11-24 01:58:37,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 20:59:13] 2025-11-24 01:58:37,517 | INFO     | fitting pss+swap vs Time
[2025-11-23 20:59:13] 2025-11-24 01:58:37,517 | INFO     | sum of square deviations: 100982176342.9637
[2025-11-23 20:59:13] 2025-11-24 01:58:37,526 | INFO     | sum of deviations: 700980981320.0334
[2025-11-23 20:59:13] 2025-11-24 01:58:37,526 | INFO     | mean x: 1763928522.0072675
[2025-11-23 20:59:13] 2025-11-24 01:58:37,526 | INFO     | mean y: 2990870.1933139535
[2025-11-23 20:59:13] 2025-11-24 01:58:37,527 | INFO     | intersect: -12241549613.22445
[2025-11-23 20:59:13] 2025-11-24 01:58:37,527 | INFO     | chi2: 5.651590056614242
[2025-11-23 20:59:13] 2025-11-24 01:58:37,528 | INFO     | sum of square deviations: 98796604596.66736
[2025-11-23 20:59:13] 2025-11-24 01:58:37,537 | INFO     | sum of deviations: 928059709710.8868
[2025-11-23 20:59:13] 2025-11-24 01:58:37,537 | INFO     | mean x: 1763928369.510981
[2025-11-23 20:59:13] 2025-11-24 01:58:37,537 | INFO     | mean y: 3006701.4816983896
[2025-11-23 20:59:13] 2025-11-24 01:58:37,537 | INFO     | intersect: -16566700903.777235
[2025-11-23 20:59:13] 2025-11-24 01:58:37,538 | INFO     | chi2: 2.743687702524029
[2025-11-23 20:59:13] 2025-11-24 01:58:37,538 | INFO     | current chi2=2.743687702524029 (change=51.45281814428488 %)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,539 | INFO     | sum of square deviations: 96642800887.85257
[2025-11-23 20:59:13] 2025-11-24 01:58:37,547 | INFO     | sum of deviations: 982498537957.1469
[2025-11-23 20:59:13] 2025-11-24 01:58:37,547 | INFO     | mean x: 1763928217.0147493
[2025-11-23 20:59:13] 2025-11-24 01:58:37,548 | INFO     | mean y: 3010547.4852507375
[2025-11-23 20:59:13] 2025-11-24 01:58:37,548 | INFO     | intersect: -17929591553.828465
[2025-11-23 20:59:13] 2025-11-24 01:58:37,548 | INFO     | chi2: 2.4549591926388548
[2025-11-23 20:59:13] 2025-11-24 01:58:37,549 | INFO     | current chi2=2.4549591926388548 (change=10.52337369225956 %)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,549 | INFO     | right removable region: 677
[2025-11-23 20:59:13] 2025-11-24 01:58:37,549 | INFO     | sum of square deviations: 98796391706.66734
[2025-11-23 20:59:13] 2025-11-24 01:58:37,558 | INFO     | sum of deviations: 504458877732.76306
[2025-11-23 20:59:13] 2025-11-24 01:58:37,558 | INFO     | mean x: 1763928674.510981
[2025-11-23 20:59:13] 2025-11-24 01:58:37,558 | INFO     | mean y: 3004555.831625183
[2025-11-23 20:59:13] 2025-11-24 01:58:37,558 | INFO     | intersect: -9003695630.005213
[2025-11-23 20:59:13] 2025-11-24 01:58:37,559 | INFO     | chi2: 3.340088174018871
[2025-11-23 20:59:13] 2025-11-24 01:58:37,559 | INFO     | current chi2=3.340088174018871 (change=40.90002741600382 %)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,560 | INFO     | sum of square deviations: 96642416770.88055
[2025-11-23 20:59:13] 2025-11-24 01:58:37,568 | INFO     | sum of deviations: 465180267584.21716
[2025-11-23 20:59:13] 2025-11-24 01:58:37,568 | INFO     | mean x: 1763928827.0132744
[2025-11-23 20:59:13] 2025-11-24 01:58:37,568 | INFO     | mean y: 3007334.7536873156
[2025-11-23 20:59:13] 2025-11-24 01:58:37,569 | INFO     | intersect: -8487517955.9671955
[2025-11-23 20:59:13] 2025-11-24 01:58:37,569 | INFO     | chi2: 3.3011247909640917
[2025-11-23 20:59:13] 2025-11-24 01:58:37,569 | INFO     | current chi2=3.3011247909640917 (change=1.1665375590338884 %)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,569 | INFO     | left removable region: 20
[2025-11-23 20:59:13] 2025-11-24 01:58:37,570 | INFO     | sum of square deviations: 87937796339.93059
[2025-11-23 20:59:13] 2025-11-24 01:58:37,578 | INFO     | sum of deviations: 694489809993.4424
[2025-11-23 20:59:13] 2025-11-24 01:58:37,578 | INFO     | mean x: 1763928796.52207
[2025-11-23 20:59:13] 2025-11-24 01:58:37,578 | INFO     | mean y: 3031035.7625570777
[2025-11-23 20:59:13] 2025-11-24 01:58:37,579 | INFO     | intersect: -13927617965.300877
[2025-11-23 20:59:13] 2025-11-24 01:58:37,579 | INFO     | chi2: 0.06981771250625679
[2025-11-23 20:59:13] 2025-11-24 01:58:37,579 | INFO     | current memory leak: 7.90 B/s (using 657 data points, chi2=0.07)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,580 | INFO     | could have reported an average CPU frequency of 2382 MHz (27 samples)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,580 | INFO     | ..............................
[2025-11-23 20:59:13] 2025-11-24 01:58:37,580 | INFO     | . Timing measurements:
[2025-11-23 20:59:13] 2025-11-24 01:58:37,580 | INFO     | . get job = 0 s
[2025-11-23 20:59:13] 2025-11-24 01:58:37,580 | INFO     | . initial setup = 2 s
[2025-11-23 20:59:13] 2025-11-24 01:58:37,580 | INFO     | . payload setup = 8 s
[2025-11-23 20:59:13] 2025-11-24 01:58:37,581 | INFO     | . stage-in = 0 s
[2025-11-23 20:59:13] 2025-11-24 01:58:37,581 | INFO     | . payload execution = 41939 s
[2025-11-23 20:59:13] 2025-11-24 01:58:37,581 | INFO     | . stage-out = 3 s
[2025-11-23 20:59:13] 2025-11-24 01:58:37,581 | INFO     | . log creation = 0 s
[2025-11-23 20:59:13] 2025-11-24 01:58:37,581 | INFO     | ..............................
[2025-11-23 20:59:13] 2025-11-24 01:58:37,730 | INFO     | 
[2025-11-23 20:59:13] 2025-11-24 01:58:37,731 | INFO     | job summary report
[2025-11-23 20:59:13] 2025-11-24 01:58:37,731 | INFO     | --------------------------------------------------
[2025-11-23 20:59:13] 2025-11-24 01:58:37,731 | INFO     | PanDA job id: 6895344255
[2025-11-23 20:59:13] 2025-11-24 01:58:37,731 | INFO     | task id: 47556137
[2025-11-23 20:59:13] 2025-11-24 01:58:37,731 | INFO     | errors: (none)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,731 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 20:59:13] 2025-11-24 01:58:37,731 | INFO     | pilot state: finished 
[2025-11-23 20:59:13] 2025-11-24 01:58:37,731 | INFO     | transexitcode: 0
[2025-11-23 20:59:13] 2025-11-24 01:58:37,732 | INFO     | exeerrorcode: 0
[2025-11-23 20:59:13] 2025-11-24 01:58:37,732 | INFO     | exeerrordiag: 
[2025-11-23 20:59:13] 2025-11-24 01:58:37,732 | INFO     | exitcode: 0
[2025-11-23 20:59:13] 2025-11-24 01:58:37,732 | INFO     | exitmsg: OK
[2025-11-23 20:59:13] 2025-11-24 01:58:37,732 | INFO     | cpuconsumptiontime: 325506 s
[2025-11-23 20:59:13] 2025-11-24 01:58:37,732 | INFO     | nevents: 1000
[2025-11-23 20:59:13] 2025-11-24 01:58:37,732 | INFO     | neventsw: 0
[2025-11-23 20:59:13] 2025-11-24 01:58:37,732 | INFO     | pid: 22974
[2025-11-23 20:59:13] 2025-11-24 01:58:37,732 | INFO     | pgrp: 22974
[2025-11-23 20:59:13] 2025-11-24 01:58:37,732 | INFO     | corecount: 8
[2025-11-23 20:59:13] 2025-11-24 01:58:37,733 | INFO     | event service: False
[2025-11-23 20:59:13] 2025-11-24 01:58:37,733 | INFO     | sizes: {0: 2298529, 1: 2298784, 7: 2299046, 12: 2299074, 41952: 2343391, 41957: 2352385, 41958: 2352569, 41964: 2352815}
[2025-11-23 20:59:13] 2025-11-24 01:58:37,733 | INFO     | --------------------------------------------------
[2025-11-23 20:59:13] 2025-11-24 01:58:37,733 | INFO     | 
[2025-11-23 20:59:13] 2025-11-24 01:58:37,733 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 20:59:13] 2025-11-24 01:58:37,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,761 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,761 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,761 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,763 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,763 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,763 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,763 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,763 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,763 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,764 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 20:59:13] 2025-11-24 01:58:37,764 | INFO     | job 6895344255 has completed (purged errors)
[2025-11-23 20:59:13] 2025-11-24 01:58:37,764 | INFO     | overall cleanup function is called
[2025-11-23 20:59:13] 2025-11-24 01:58:38,780 | INFO     | --- collectZombieJob: --- 10, [22974]
[2025-11-23 20:59:13] 2025-11-24 01:58:38,780 | INFO     | zombie collector waiting for pid 22974
[2025-11-23 20:59:13] 2025-11-24 01:58:38,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 20:59:13] 2025-11-24 01:58:38,781 | INFO     | collected zombie processes
[2025-11-23 20:59:13] 2025-11-24 01:58:38,782 | INFO     | will attempt to kill all subprocesses of pid=22974
[2025-11-23 20:59:13] 2025-11-24 01:58:38,867 | INFO     | process IDs to be killed: [22974] (in reverse order)
[2025-11-23 20:59:13] 2025-11-24 01:58:38,926 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 20:59:13] 2025-11-24 01:58:38,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 20:59:13] 2025-11-24 01:58:38,931 | INFO     | did not find any defunct processes belonging to 22974
[2025-11-23 20:59:13] 2025-11-24 01:58:38,933 | INFO     | did not find any defunct processes belonging to 22974
[2025-11-23 20:59:13] 2025-11-24 01:58:38,936 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 20:59:13] 2025-11-24 01:58:38,936 | INFO     | ready for new job
[2025-11-23 20:59:13] 2025-11-24 01:58:38,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 20:59:13] 2025-11-24 01:58:38,940 | INFO     | ***************************************
[2025-11-23 20:59:13] 2025-11-24 01:58:38,940 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 20:59:13] 2025-11-24 01:58:38,940 | INFO     | ***************************************
[2025-11-23 20:59:13] 2025-11-24 01:58:38,940 | INFO     | 
[2025-11-23 20:59:13] 2025-11-24 01:58:38,941 | INFO     | architecture information:
[2025-11-23 20:59:13] 2025-11-24 01:58:38,941 | INFO     | executing command: cat /etc/os-release
[2025-11-23 20:59:13] 2025-11-24 01:58:38,961 | INFO     | cat /etc/os-release:
[2025-11-23 20:59:13] NAME="CentOS Linux"
[2025-11-23 20:59:13] VERSION="7 (Core)"
[2025-11-23 20:59:13] ID="centos"
[2025-11-23 20:59:13] ID_LIKE="rhel fedora"
[2025-11-23 20:59:13] VERSION_ID="7"
[2025-11-23 20:59:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 20:59:13] ANSI_COLOR="0;31"
[2025-11-23 20:59:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 20:59:13] HOME_URL="https://www.centos.org/"
[2025-11-23 20:59:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 20:59:13] 
[2025-11-23 20:59:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 20:59:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 20:59:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 20:59:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 20:59:13] 
[2025-11-23 20:59:13] 2025-11-24 01:58:38,961 | INFO     | ***************************************
[2025-11-23 20:59:13] 2025-11-24 01:58:39,464 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 20:59:13] 2025-11-24 01:58:39,486 | INFO     | sufficient remaining disk space (17449353216 B)
[2025-11-23 20:59:13] 2025-11-24 01:58:39,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 20:59:13] 2025-11-24 01:58:39,487 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 20:59:13] 2025-11-24 01:58:39,487 | INFO     | update_server=False
[2025-11-23 20:59:13] 2025-11-24 01:58:39,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 20:59:13] 2025-11-24 01:58:39,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:59:13] 2025-11-24 01:58:39,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 20:59:13] 2025-11-24 01:58:39,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:59:13] 2025-11-24 01:58:39,711 | INFO     | aborting loop
[2025-11-23 20:59:13] 2025-11-24 01:58:39,873 | INFO     | all data control threads have been joined
[2025-11-23 20:59:13] 2025-11-24 01:58:40,493 | INFO     | [job] retrieve thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:40,494 | INFO     | [job] queue monitor thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:40,622 | INFO     | [data] copytool_in thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:40,674 | INFO     | all payload control threads have been joined
[2025-11-23 20:59:13] 2025-11-24 01:58:40,712 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:40,714 | INFO     | [job] job monitor thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:40,878 | INFO     | [data] control thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:40,910 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:40,937 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:41,076 | INFO     | all job control threads have been joined
[2025-11-23 20:59:13] 2025-11-24 01:58:41,492 | INFO     | [data] copytool_out thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:41,527 | INFO     | [payload] validate_post thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:41,680 | INFO     | [payload] control thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:41,727 | INFO     | [job] validate thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:41,891 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:41,943 | INFO     | [payload] failed_post thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:42,082 | INFO     | [job] control thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:58:42,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 20:59:13] 2025-11-24 01:58:46,354 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 20:59:13] 2025-11-24 01:59:06,281 | INFO     | [monitor] cgroup control has ended
[2025-11-23 20:59:13] 2025-11-24 01:59:07,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855985215296)>', '<ExcThread(monitor, started 139855241656064)>']
[2025-11-23 20:59:13] 2025-11-24 01:59:09,252 | INFO     | PID=16543 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 20:59:13] 2025-11-24 01:59:09,252 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 20:59:13] 2025-11-24 01:59:09,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 20:59:13] 2025-11-24 01:59:09,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 20:59:13] 2025-11-24 01:59:09,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 20:59:13] 2025-11-24 01:59:09,252 | INFO     | [monitor] control thread has ended
[2025-11-23 20:59:13] 2025-11-24 01:59:12,621 | INFO     | all workflow threads have been joined
[2025-11-23 20:59:13] 2025-11-24 01:59:12,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 20:59:13] 2025-11-24 01:59:12,622 | INFO     | traces error code: 0
[2025-11-23 20:59:13] 2025-11-24 01:59:12,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 20:59:13] 2025-11-24 01:59:12,742 [wrapper] ==== pilot stdout END ====
[2025-11-23 20:59:13] 2025-11-24 01:59:12,747 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 20:59:13] 2025-11-24 01:59:12,751 [wrapper] pilotpid: 16543
[2025-11-23 20:59:13] 2025-11-24 01:59:12,756 [wrapper] Pilot exit status: 0
[2025-11-23 20:59:13] 2025-11-24 01:59:12,774 [wrapper] pandaids: 6895344255
[2025-11-23 20:59:13] 2025-11-24 01:59:12,817 [wrapper] cleanup supervisor_pilot  4277 16544
[2025-11-23 20:59:13] 2025-11-24 01:59:12,823 [wrapper] Test setup, not cleaning
[2025-11-23 20:59:13] 2025-11-24 01:59:12,828 [wrapper] apfmon messages muted
[2025-11-23 20:59:13] 2025-11-24 01:59:12,833 [wrapper] ==== wrapper stdout END ====
[2025-11-23 20:59:13] 2025-11-24 01:59:12,838 [wrapper] ==== wrapper stderr END ====
[2025-11-23 20:59:13]  *** Error codes and diagnostics ***
[2025-11-23 20:59:13]     "exeErrorCode": 0,
[2025-11-23 20:59:13]     "exeErrorDiag": "",
[2025-11-23 20:59:13]     "pilotErrorCode": 0,
[2025-11-23 20:59:13]     "pilotErrorDiag": "",
[2025-11-23 20:59:13]  *** Listing of results directory ***
[2025-11-23 20:59:13] total 1336648
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 11:54 pilot3.tar.gz
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 11:55 queuedata.json
[2025-11-23 20:59:13] -rwx------ 1 boincer umatlas     36292 Nov 22 11:56 runpilot2-wrapper.sh
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas       100 Nov 23 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 20:59:13] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 09:18 run_atlas
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas       105 Nov 23 09:18 job.xml
[2025-11-23 20:59:13] -rw-r--r-- 2 boincer umatlas 410521241 Nov 23 09:18 EVNT.47483658._000439.pool.root.1
[2025-11-23 20:59:13] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 09:18 start_atlas.sh
[2025-11-23 20:59:13] drwxrwx--x 2 boincer umatlas      4096 Nov 23 09:18 shared
[2025-11-23 20:59:13] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 09:18 input.tar.gz
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas         0 Nov 23 09:18 boinc_lockfile
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 09:18 pandaJob.out
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas        57 Nov 23 09:18 setup.sh.local
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas    989785 Nov 23 09:18 agis_schedconf.cvmfs.json
[2025-11-23 20:59:13] drwx------ 5 boincer umatlas      4096 Nov 23 09:18 pilot3
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas       533 Nov 23 20:48 boinc_task_state.xml
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas      5910 Nov 23 20:55 init_data.xml
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas 938810796 Nov 23 20:57 HITS.47556137._004350.pool.root.1
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas      1063 Nov 23 20:58 memory_monitor_summary.json
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas        95 Nov 23 20:58 pilot_heartbeat.json
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas   1526164 Nov 23 20:58 agis_ddmendpoints.agis.ALL.json
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas   1939205 Nov 23 20:58 log.47556137._004350.job.log.tgz.1
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas      8653 Nov 23 20:58 heartbeat.json
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 20:58 boinc_mmap_file
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas        29 Nov 23 20:58 wrapper_checkpoint.txt
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas      4746 Nov 23 20:59 pilotlog.txt
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas   5797619 Nov 23 20:59 log.47556137._004350.job.log.1
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas       353 Nov 23 20:59 output.list
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas       620 Nov 23 20:59 runtime_log
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas   7751680 Nov 23 20:59 result.tar.gz
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 20:59 runtime_log.err
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas       667 Nov 23 20:59 EPPNDmI55g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7HKKDmSl822m.diag
[2025-11-23 20:59:13] -rw-r--r-- 1 boincer umatlas     21311 Nov 23 20:59 stderr.txt
[2025-11-23 20:59:13] HITS file was successfully produced:
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas 938810796 Nov 23 20:57 shared/HITS.pool.root.1
[2025-11-23 20:59:13]  *** Contents of shared directory: ***
[2025-11-23 20:59:13] total 1325884
[2025-11-23 20:59:13] -rw-r--r-- 2 boincer umatlas 410521241 Nov 23 09:18 ATLAS.root_0
[2025-11-23 20:59:13] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 09:18 start_atlas.sh
[2025-11-23 20:59:13] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 09:18 input.tar.gz
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas 938810796 Nov 23 20:57 HITS.pool.root.1
[2025-11-23 20:59:13] -rw------- 1 boincer umatlas   7751680 Nov 23 20:59 result.tar.gz
20:59:14 (12857): run_atlas exited; CPU time 322061.428901
20:59:14 (12857): called boinc_finish(0)

</stderr_txt>
]]>

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