Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:02:24 (32416): wrapper (7.7.26015): starting
10:02:24 (32416): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 10:02:24] Arguments: --nthreads 12
[2025-11-23 10:02:24] Threads: 12
[2025-11-23 10:02:24] Checking for CVMFS
[2025-11-23 10:02:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:02:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:02:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:02:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:02:24] 2.11.2.0 14820 138860 92716 153211 2 81 12415625 20275200 1 130560 0 67745226 99.961 5591866 35804 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 10:02:24] CVMFS is ok
[2025-11-23 10:02:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:02:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:02:24] Further information can be found at the LHC@home message board.
[2025-11-23 10:02:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:02:24] Checking for apptainer binary...
[2025-11-23 10:02:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:02:24] Running /usr/bin/apptainer --version
[2025-11-23 10:02:24] apptainer version 1.3.2-1.el7
[2025-11-23 10:02:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:02:25] c-205-27.aglt2.org
[2025-11-23 10:02:25] apptainer works
[2025-11-23 10:02:25] Set ATHENA_PROC_NUMBER=12
[2025-11-23 10:02:25] Set ATHENA_CORE_NUMBER=12
[2025-11-23 10:02:26] Starting ATLAS job with PandaID=6895344252
[2025-11-23 10:02:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:12:29]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:12:29] 2025-11-23 22:11:49,914 | INFO     | monitor loop #1928: job 0:6895344252 is in state 'finished'
[2025-11-23 17:12:29] 2025-11-23 22:11:49,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:12:29] 2025-11-23 22:11:51,177 | INFO     | time since job start (25750s) is within the limit (172800.0s)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,334 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 17:12:29] 2025-11-23 22:11:52,338 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-23 17:12:29] 2025-11-23 22:11:52,340 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895344252/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,340 | INFO     | extracted standard info from prmon json
[2025-11-23 17:12:29] 2025-11-23 22:11:52,340 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:12:29] 2025-11-23 22:11:52,340 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:12:29] 2025-11-23 22:11:52,347 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:12:29] 2025-11-23 22:11:52,347 | INFO     | sum of square deviations: 23302865579.34597
[2025-11-23 17:12:29] 2025-11-23 22:11:52,351 | INFO     | sum of deviations: 436903115404.8772
[2025-11-23 17:12:29] 2025-11-23 22:11:52,351 | INFO     | mean x: 1763923030.7582939
[2025-11-23 17:12:29] 2025-11-23 22:11:52,351 | INFO     | mean y: 3410983.106635071
[2025-11-23 17:12:29] 2025-11-23 22:11:52,352 | INFO     | intersect: -33068206962.274887
[2025-11-23 17:12:29] 2025-11-23 22:11:52,352 | INFO     | chi2: 6.277664479062783
[2025-11-23 17:12:29] 2025-11-23 22:11:52,353 | INFO     | sum of square deviations: 22484362546.508427
[2025-11-23 17:12:29] 2025-11-23 22:11:52,356 | INFO     | sum of deviations: 607191088978.1313
[2025-11-23 17:12:29] 2025-11-23 22:11:52,356 | INFO     | mean x: 1763922878.261391
[2025-11-23 17:12:29] 2025-11-23 22:11:52,357 | INFO     | mean y: 3442685.393285372
[2025-11-23 17:12:29] 2025-11-23 22:11:52,357 | INFO     | intersect: -47631363554.256775
[2025-11-23 17:12:29] 2025-11-23 22:11:52,357 | INFO     | chi2: 2.9099108023146774
[2025-11-23 17:12:29] 2025-11-23 22:11:52,357 | INFO     | current chi2=2.9099108023146774 (change=53.64660198040547 %)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,358 | INFO     | sum of square deviations: 21685230032.689274
[2025-11-23 17:12:29] 2025-11-23 22:11:52,361 | INFO     | sum of deviations: 628232940917.796
[2025-11-23 17:12:29] 2025-11-23 22:11:52,362 | INFO     | mean x: 1763922725.762136
[2025-11-23 17:12:29] 2025-11-23 22:11:52,362 | INFO     | mean y: 3446664.640776699
[2025-11-23 17:12:29] 2025-11-23 22:11:52,362 | INFO     | intersect: -51098356723.508705
[2025-11-23 17:12:29] 2025-11-23 22:11:52,362 | INFO     | chi2: 2.6902103473441255
[2025-11-23 17:12:29] 2025-11-23 22:11:52,362 | INFO     | current chi2=2.6902103473441255 (change=7.550075239275102 %)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,363 | INFO     | right removable region: 411
[2025-11-23 17:12:29] 2025-11-23 22:11:52,363 | INFO     | sum of square deviations: 22484296056.50841
[2025-11-23 17:12:29] 2025-11-23 22:11:52,367 | INFO     | sum of deviations: 290150699153.25183
[2025-11-23 17:12:29] 2025-11-23 22:11:52,367 | INFO     | mean x: 1763923183.261391
[2025-11-23 17:12:29] 2025-11-23 22:11:52,367 | INFO     | mean y: 3438251.841726619
[2025-11-23 17:12:29] 2025-11-23 22:11:52,367 | INFO     | intersect: -22759273268.66296
[2025-11-23 17:12:29] 2025-11-23 22:11:52,368 | INFO     | chi2: 3.8130641202104005
[2025-11-23 17:12:29] 2025-11-23 22:11:52,368 | INFO     | current chi2=3.8130641202104005 (change=39.25982930550522 %)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,368 | INFO     | sum of square deviations: 21685147804.689278
[2025-11-23 17:12:29] 2025-11-23 22:11:52,372 | INFO     | sum of deviations: 250241757273.56757
[2025-11-23 17:12:29] 2025-11-23 22:11:52,372 | INFO     | mean x: 1763923335.762136
[2025-11-23 17:12:29] 2025-11-23 22:11:52,372 | INFO     | mean y: 3445861.536407767
[2025-11-23 17:12:29] 2025-11-23 22:11:52,372 | INFO     | intersect: -20351835052.96667
[2025-11-23 17:12:29] 2025-11-23 22:11:52,373 | INFO     | chi2: 3.7289143912890435
[2025-11-23 17:12:29] 2025-11-23 22:11:52,373 | INFO     | current chi2=3.7289143912890435 (change=2.206879461463496 %)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,373 | INFO     | left removable region: 20
[2025-11-23 17:12:29] 2025-11-23 22:11:52,373 | INFO     | sum of square deviations: 18535342467.867027
[2025-11-23 17:12:29] 2025-11-23 22:11:52,376 | INFO     | sum of deviations: 383123718460.0692
[2025-11-23 17:12:29] 2025-11-23 22:11:52,377 | INFO     | mean x: 1763923305.263427
[2025-11-23 17:12:29] 2025-11-23 22:11:52,377 | INFO     | mean y: 3494504.84398977
[2025-11-23 17:12:29] 2025-11-23 22:11:52,377 | INFO     | intersect: -36456627932.19607
[2025-11-23 17:12:29] 2025-11-23 22:11:52,377 | INFO     | chi2: 0.05329770533093726
[2025-11-23 17:12:29] 2025-11-23 22:11:52,377 | INFO     | current memory leak: 20.67 B/s (using 391 data points, chi2=0.05)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,378 | INFO     | could have reported an average CPU frequency of 2407 MHz (18 samples)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,378 | INFO     | ..............................
[2025-11-23 17:12:29] 2025-11-23 22:11:52,378 | INFO     | . Timing measurements:
[2025-11-23 17:12:29] 2025-11-23 22:11:52,378 | INFO     | . get job = 0 s
[2025-11-23 17:12:29] 2025-11-23 22:11:52,378 | INFO     | . initial setup = 2 s
[2025-11-23 17:12:29] 2025-11-23 22:11:52,378 | INFO     | . payload setup = 7 s
[2025-11-23 17:12:29] 2025-11-23 22:11:52,379 | INFO     | . stage-in = 0 s
[2025-11-23 17:12:29] 2025-11-23 22:11:52,379 | INFO     | . payload execution = 25713 s
[2025-11-23 17:12:29] 2025-11-23 22:11:52,379 | INFO     | . stage-out = 3 s
[2025-11-23 17:12:29] 2025-11-23 22:11:52,379 | INFO     | . log creation = 0 s
[2025-11-23 17:12:29] 2025-11-23 22:11:52,379 | INFO     | ..............................
[2025-11-23 17:12:29] 2025-11-23 22:11:52,459 | INFO     | 
[2025-11-23 17:12:29] 2025-11-23 22:11:52,459 | INFO     | job summary report
[2025-11-23 17:12:29] 2025-11-23 22:11:52,459 | INFO     | --------------------------------------------------
[2025-11-23 17:12:29] 2025-11-23 22:11:52,459 | INFO     | PanDA job id: 6895344252
[2025-11-23 17:12:29] 2025-11-23 22:11:52,459 | INFO     | task id: 47556137
[2025-11-23 17:12:29] 2025-11-23 22:11:52,460 | INFO     | errors: (none)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:12:29] 2025-11-23 22:11:52,460 | INFO     | pilot state: finished 
[2025-11-23 17:12:29] 2025-11-23 22:11:52,460 | INFO     | transexitcode: 0
[2025-11-23 17:12:29] 2025-11-23 22:11:52,460 | INFO     | exeerrorcode: 0
[2025-11-23 17:12:29] 2025-11-23 22:11:52,460 | INFO     | exeerrordiag: 
[2025-11-23 17:12:29] 2025-11-23 22:11:52,461 | INFO     | exitcode: 0
[2025-11-23 17:12:29] 2025-11-23 22:11:52,461 | INFO     | exitmsg: OK
[2025-11-23 17:12:29] 2025-11-23 22:11:52,461 | INFO     | cpuconsumptiontime: 295574 s
[2025-11-23 17:12:29] 2025-11-23 22:11:52,461 | INFO     | nevents: 1000
[2025-11-23 17:12:29] 2025-11-23 22:11:52,461 | INFO     | neventsw: 0
[2025-11-23 17:12:29] 2025-11-23 22:11:52,461 | INFO     | pid: 10381
[2025-11-23 17:12:29] 2025-11-23 22:11:52,462 | INFO     | pgrp: 10381
[2025-11-23 17:12:29] 2025-11-23 22:11:52,462 | INFO     | corecount: 12
[2025-11-23 17:12:29] 2025-11-23 22:11:52,462 | INFO     | event service: False
[2025-11-23 17:12:29] 2025-11-23 22:11:52,462 | INFO     | sizes: {0: 2298585, 1: 2298784, 6: 2299046, 11: 2299074, 25724: 2336283, 25728: 2345461, 25736: 2345679}
[2025-11-23 17:12:29] 2025-11-23 22:11:52,462 | INFO     | --------------------------------------------------
[2025-11-23 17:12:29] 2025-11-23 22:11:52,462 | INFO     | 
[2025-11-23 17:12:29] 2025-11-23 22:11:52,463 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 17:12:29] 2025-11-23 22:11:52,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,492 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,492 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,492 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,492 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:12:29] 2025-11-23 22:11:52,493 | INFO     | job 6895344252 has completed (purged errors)
[2025-11-23 17:12:29] 2025-11-23 22:11:52,493 | INFO     | overall cleanup function is called
[2025-11-23 17:12:29] 2025-11-23 22:11:53,510 | INFO     | --- collectZombieJob: --- 10, [10381]
[2025-11-23 17:12:29] 2025-11-23 22:11:53,510 | INFO     | zombie collector waiting for pid 10381
[2025-11-23 17:12:29] 2025-11-23 22:11:53,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:12:29] 2025-11-23 22:11:53,510 | INFO     | collected zombie processes
[2025-11-23 17:12:29] 2025-11-23 22:11:53,510 | INFO     | will attempt to kill all subprocesses of pid=10381
[2025-11-23 17:12:29] 2025-11-23 22:11:53,605 | INFO     | process IDs to be killed: [10381] (in reverse order)
[2025-11-23 17:12:29] 2025-11-23 22:11:53,659 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:12:29] 2025-11-23 22:11:53,660 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:12:29] 2025-11-23 22:11:53,664 | INFO     | did not find any defunct processes belonging to 10381
[2025-11-23 17:12:29] 2025-11-23 22:11:53,668 | INFO     | did not find any defunct processes belonging to 10381
[2025-11-23 17:12:29] 2025-11-23 22:11:53,670 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:12:29] 2025-11-23 22:11:53,670 | INFO     | ready for new job
[2025-11-23 17:12:29] 2025-11-23 22:11:53,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:12:29] 2025-11-23 22:11:53,672 | INFO     | ***************************************
[2025-11-23 17:12:29] 2025-11-23 22:11:53,672 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:12:29] 2025-11-23 22:11:53,672 | INFO     | ***************************************
[2025-11-23 17:12:29] 2025-11-23 22:11:53,672 | INFO     | 
[2025-11-23 17:12:29] 2025-11-23 22:11:53,673 | INFO     | architecture information:
[2025-11-23 17:12:29] 2025-11-23 22:11:53,674 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:12:29] 2025-11-23 22:11:53,689 | INFO     | cat /etc/os-release:
[2025-11-23 17:12:29] NAME="CentOS Linux"
[2025-11-23 17:12:29] VERSION="7 (Core)"
[2025-11-23 17:12:29] ID="centos"
[2025-11-23 17:12:29] ID_LIKE="rhel fedora"
[2025-11-23 17:12:29] VERSION_ID="7"
[2025-11-23 17:12:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:12:29] ANSI_COLOR="0;31"
[2025-11-23 17:12:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:12:29] HOME_URL="https://www.centos.org/"
[2025-11-23 17:12:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:12:29] 
[2025-11-23 17:12:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:12:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:12:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:12:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:12:29] 
[2025-11-23 17:12:29] 2025-11-23 22:11:53,689 | INFO     | ***************************************
[2025-11-23 17:12:29] 2025-11-23 22:11:54,192 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 17:12:29] 2025-11-23 22:11:54,211 | INFO     | sufficient remaining disk space (28251783168 B)
[2025-11-23 17:12:29] 2025-11-23 22:11:54,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:12:29] 2025-11-23 22:11:54,211 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:12:29] 2025-11-23 22:11:54,211 | INFO     | update_server=False
[2025-11-23 17:12:29] 2025-11-23 22:11:54,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:12:29] 2025-11-23 22:11:54,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:12:29] 2025-11-23 22:11:54,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:12:29] 2025-11-23 22:11:54,212 | INFO     | aborting loop
[2025-11-23 17:12:29] 2025-11-23 22:11:54,366 | INFO     | all data control threads have been joined
[2025-11-23 17:12:29] 2025-11-23 22:11:54,869 | INFO     | all job control threads have been joined
[2025-11-23 17:12:29] 2025-11-23 22:11:55,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:12:29] 2025-11-23 22:11:55,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:12:29] 2025-11-23 22:11:55,212 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:55,215 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:55,218 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:55,292 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:55,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:55,371 | INFO     | [data] control thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:55,421 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:55,504 | INFO     | all payload control threads have been joined
[2025-11-23 17:12:29] 2025-11-23 22:11:55,615 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:55,874 | INFO     | [job] control thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:56,075 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:56,293 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:56,510 | INFO     | [payload] control thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:56,622 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:56,637 | INFO     | [job] validate thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:57,134 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:11:59,210 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:12:29] 2025-11-23 22:12:22,780 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:12:29] 2025-11-23 22:12:23,261 | INFO     | 25754s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-23 17:12:29] 2025-11-23 22:12:23,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139676907325248)>', '<ExcThread(monitor, started 139675977094912)>']
[2025-11-23 17:12:29] 2025-11-23 22:12:24,385 | INFO     | PID=3811 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 17:12:29] 2025-11-23 22:12:24,385 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:12:29] 2025-11-23 22:12:24,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:12:29] 2025-11-23 22:12:24,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:12:29] 2025-11-23 22:12:24,385 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:12:29] 2025-11-23 22:12:24,385 | INFO     | [monitor] control thread has ended
[2025-11-23 17:12:29] 2025-11-23 22:12:28,755 | INFO     | all workflow threads have been joined
[2025-11-23 17:12:29] 2025-11-23 22:12:28,755 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:12:29] 2025-11-23 22:12:28,755 | INFO     | traces error code: 0
[2025-11-23 17:12:29] 2025-11-23 22:12:28,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:12:29] 2025-11-23 22:12:28,844 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:12:29] 2025-11-23 22:12:28,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:12:29] 2025-11-23 22:12:28,852 [wrapper] pilotpid: 3811
[2025-11-23 17:12:29] 2025-11-23 22:12:28,856 [wrapper] Pilot exit status: 0
[2025-11-23 17:12:29] 2025-11-23 22:12:28,870 [wrapper] pandaids: 6895344252
[2025-11-23 17:12:29] 2025-11-23 22:12:28,911 [wrapper] cleanup supervisor_pilot  2369 3812
[2025-11-23 17:12:29] 2025-11-23 22:12:28,916 [wrapper] Test setup, not cleaning
[2025-11-23 17:12:29] 2025-11-23 22:12:28,920 [wrapper] apfmon messages muted
[2025-11-23 17:12:29] 2025-11-23 22:12:28,924 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:12:29] 2025-11-23 22:12:28,927 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:12:29]  *** Error codes and diagnostics ***
[2025-11-23 17:12:29]     "exeErrorCode": 0,
[2025-11-23 17:12:29]     "exeErrorDiag": "",
[2025-11-23 17:12:29]     "pilotErrorCode": 0,
[2025-11-23 17:12:29]     "pilotErrorDiag": "",
[2025-11-23 17:12:29]  *** Listing of results directory ***
[2025-11-23 17:12:29] total 1309504
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 11:54 pilot3.tar.gz
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 11:55 queuedata.json
[2025-11-23 17:12:29] -rwx------ 1 boincer umatlas     36292 Nov 22 11:56 runpilot2-wrapper.sh
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas       100 Nov 23 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:12:29] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 10:02 run_atlas
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas       105 Nov 23 10:02 job.xml
[2025-11-23 17:12:29] -rw-r--r-- 2 boincer umatlas 410521241 Nov 23 10:02 EVNT.47483658._000439.pool.root.1
[2025-11-23 17:12:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 10:02 start_atlas.sh
[2025-11-23 17:12:29] drwxrwx--x 2 boincer umatlas      4096 Nov 23 10:02 shared
[2025-11-23 17:12:29] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 10:02 input.tar.gz
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas         0 Nov 23 10:02 boinc_lockfile
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 10:02 pandaJob.out
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas        57 Nov 23 10:02 setup.sh.local
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas    989785 Nov 23 10:02 agis_schedconf.cvmfs.json
[2025-11-23 17:12:29] drwx------ 5 boincer umatlas      4096 Nov 23 10:02 pilot3
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas       533 Nov 23 17:02 boinc_task_state.xml
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas      5956 Nov 23 17:04 init_data.xml
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas 914873749 Nov 23 17:11 HITS.47556137._004347.pool.root.1
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas      1061 Nov 23 17:11 memory_monitor_summary.json
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas   1526164 Nov 23 17:11 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas   2191061 Nov 23 17:11 log.47556137._004347.job.log.tgz.1
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas        95 Nov 23 17:11 pilot_heartbeat.json
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas      8664 Nov 23 17:11 heartbeat.json
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 17:12 boinc_mmap_file
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas        29 Nov 23 17:12 wrapper_checkpoint.txt
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas      4861 Nov 23 17:12 pilotlog.txt
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas   3618183 Nov 23 17:12 log.47556137._004347.job.log.1
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas       353 Nov 23 17:12 output.list
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas       620 Nov 23 17:12 runtime_log
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas   5826560 Nov 23 17:12 result.tar.gz
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 17:12 runtime_log.err
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas       670 Nov 23 17:12 DdKNDmI55g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4HKKDmq9ragm.diag
[2025-11-23 17:12:29] -rw-r--r-- 1 boincer umatlas     21318 Nov 23 17:12 stderr.txt
[2025-11-23 17:12:29] HITS file was successfully produced:
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas 914873749 Nov 23 17:11 shared/HITS.pool.root.1
[2025-11-23 17:12:29]  *** Contents of shared directory: ***
[2025-11-23 17:12:29] total 1300624
[2025-11-23 17:12:29] -rw-r--r-- 2 boincer umatlas 410521241 Nov 23 10:02 ATLAS.root_0
[2025-11-23 17:12:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 10:02 start_atlas.sh
[2025-11-23 17:12:29] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 10:02 input.tar.gz
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas 914873749 Nov 23 17:11 HITS.pool.root.1
[2025-11-23 17:12:29] -rw------- 1 boincer umatlas   5826560 Nov 23 17:12 result.tar.gz
17:12:30 (32416): run_atlas exited; CPU time 288773.563710
17:12:30 (32416): called boinc_finish(0)

</stderr_txt>
]]>

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