Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
12:13:44 (1794157): wrapper (7.7.26015): starting
12:13:44 (1794157): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 12:13:44] Arguments: --nthreads 8
[2025-11-23 12:13:44] Threads: 8
[2025-11-23 12:13:44] Checking for CVMFS
[2025-11-23 12:13:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 12:13:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 12:13:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 12:13:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 12:13:44] 2.11.3.0 1658007 271 59168 153218 1 81 3907067 4096001 1822 130560 0 423518 98.861 300149 1872 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-23 12:13:44] CVMFS is ok
[2025-11-23 12:13:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 12:13:44] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-23 12:13:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-23 12:13:44] Further information can be found at the LHC@home message board.
[2025-11-23 12:13:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 12:13:44] Checking for apptainer binary...
[2025-11-23 12:13:44] apptainer is not installed, using version from CVMFS
[2025-11-23 12:13:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 12:13:44] officedc-System-Product-Name
[2025-11-23 12:13:44] apptainer works
[2025-11-23 12:13:44] Set ATHENA_PROC_NUMBER=8
[2025-11-23 12:13:44] Set ATHENA_CORE_NUMBER=8
[2025-11-23 12:13:44] Starting ATLAS job with PandaID=6895336013
[2025-11-23 12:13:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 16:46:22]  *** The last 200 lines of the pilot log: ***
[2025-11-23 16:46:22] 2025-11-23 23:45:41,932 | INFO     | monitor loop #1229: job 0:6895336013 is in state 'finished'
[2025-11-23 16:46:22] 2025-11-23 23:45:41,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,157 | INFO     | time since job start (16311s) is within the limit (172800.0s)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,450 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 16:46:22] 2025-11-23 23:45:43,454 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3662.6053125
[2025-11-23 16:46:22] 2025-11-23 23:45:43,458 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895336013/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,459 | INFO     | extracted standard info from prmon json
[2025-11-23 16:46:22] 2025-11-23 23:45:43,459 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 16:46:22] 2025-11-23 23:45:43,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 16:46:22] 2025-11-23 23:45:43,462 | INFO     | fitting pss+swap vs Time
[2025-11-23 16:46:22] 2025-11-23 23:45:43,463 | INFO     | sum of square deviations: 5902093918.0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,464 | INFO     | sum of deviations: 119739715516.00006
[2025-11-23 16:46:22] 2025-11-23 23:45:43,464 | INFO     | mean x: 1763933363.0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,464 | INFO     | mean y: 2859323.393258427
[2025-11-23 16:46:22] 2025-11-23 23:45:43,464 | INFO     | intersect: -35783233207.3697
[2025-11-23 16:46:22] 2025-11-23 23:45:43,465 | INFO     | chi2: 4.608496983419556
[2025-11-23 16:46:22] 2025-11-23 23:45:43,465 | INFO     | sum of square deviations: 5576683165.5
[2025-11-23 16:46:22] 2025-11-23 23:45:43,466 | INFO     | sum of deviations: 181548263745.0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,466 | INFO     | mean x: 1763933210.5
[2025-11-23 16:46:22] 2025-11-23 23:45:43,466 | INFO     | mean y: 2888136.3587786257
[2025-11-23 16:46:22] 2025-11-23 23:45:43,466 | INFO     | intersect: -57421749811.4394
[2025-11-23 16:46:22] 2025-11-23 23:45:43,467 | INFO     | chi2: 2.4643671710278956
[2025-11-23 16:46:22] 2025-11-23 23:45:43,467 | INFO     | current chi2=2.4643671710278956 (change=46.52557699627032 %)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,467 | INFO     | sum of square deviations: 5263458688.0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,468 | INFO     | sum of deviations: 175935802219.0001
[2025-11-23 16:46:22] 2025-11-23 23:45:43,468 | INFO     | mean x: 1763933058.0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,468 | INFO     | mean y: 2885403.4163424126
[2025-11-23 16:46:22] 2025-11-23 23:45:43,468 | INFO     | intersect: -58958150678.68997
[2025-11-23 16:46:22] 2025-11-23 23:45:43,469 | INFO     | chi2: 2.462642270107386
[2025-11-23 16:46:22] 2025-11-23 23:45:43,469 | INFO     | current chi2=2.462642270107386 (change=0.06999366574868487 %)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,469 | INFO     | right removable region: 256
[2025-11-23 16:46:22] 2025-11-23 23:45:43,469 | INFO     | sum of square deviations: 5576683165.5
[2025-11-23 16:46:22] 2025-11-23 23:45:43,470 | INFO     | sum of deviations: 45556965256.00001
[2025-11-23 16:46:22] 2025-11-23 23:45:43,470 | INFO     | mean x: 1763933515.5
[2025-11-23 16:46:22] 2025-11-23 23:45:43,470 | INFO     | mean y: 2893934.7862595418
[2025-11-23 16:46:22] 2025-11-23 23:45:43,470 | INFO     | intersect: -14407008061.55972
[2025-11-23 16:46:22] 2025-11-23 23:45:43,471 | INFO     | chi2: 2.243068488509651
[2025-11-23 16:46:22] 2025-11-23 23:45:43,471 | INFO     | current chi2=2.243068488509651 (change=51.327547862572985 %)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,471 | INFO     | sum of square deviations: 5263458688.0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,472 | INFO     | sum of deviations: 33784982857.99999
[2025-11-23 16:46:22] 2025-11-23 23:45:43,472 | INFO     | mean x: 1763933668.0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,472 | INFO     | mean y: 2899659.3229571986
[2025-11-23 16:46:22] 2025-11-23 23:45:43,472 | INFO     | intersect: -11319402322.812223
[2025-11-23 16:46:22] 2025-11-23 23:45:43,473 | INFO     | chi2: 2.2196551711638524
[2025-11-23 16:46:22] 2025-11-23 23:45:43,473 | INFO     | current chi2=2.2196551711638524 (change=1.0438075103696467 %)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,473 | INFO     | left removable region: 20
[2025-11-23 16:46:22] 2025-11-23 23:45:43,473 | INFO     | sum of square deviations: 4075741535.0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,474 | INFO     | sum of deviations: 72851243296.99998
[2025-11-23 16:46:22] 2025-11-23 23:45:43,474 | INFO     | mean x: 1763933637.5
[2025-11-23 16:46:22] 2025-11-23 23:45:43,474 | INFO     | mean y: 2937879.2118644067
[2025-11-23 16:46:22] 2025-11-23 23:45:43,474 | INFO     | intersect: -31526234783.419865
[2025-11-23 16:46:22] 2025-11-23 23:45:43,474 | INFO     | chi2: 0.009840026783375765
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | current memory leak: 17.87 B/s (using 236 data points, chi2=0.01)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | could have reported an average CPU frequency of 3821 MHz (12 samples)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | ..............................
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | . Timing measurements:
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | . get job = 0 s
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | . initial setup = 3 s
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | . payload setup = 2 s
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | . stage-in = 0 s
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | . payload execution = 16278 s
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | . stage-out = 7 s
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | . log creation = 0 s
[2025-11-23 16:46:22] 2025-11-23 23:45:43,475 | INFO     | ..............................
[2025-11-23 16:46:22] 2025-11-23 23:45:43,542 | INFO     | 
[2025-11-23 16:46:22] 2025-11-23 23:45:43,542 | INFO     | job summary report
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | --------------------------------------------------
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | PanDA job id: 6895336013
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | task id: 47556137
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | errors: (none)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | pilot state: finished 
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | transexitcode: 0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | exeerrorcode: 0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | exeerrordiag: 
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | exitcode: 0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | exitmsg: OK
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | cpuconsumptiontime: 127235 s
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | nevents: 1000
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | neventsw: 0
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | pid: 1804817
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | pgrp: 1804817
[2025-11-23 16:46:22] 2025-11-23 23:45:43,543 | INFO     | corecount: 8
[2025-11-23 16:46:22] 2025-11-23 23:45:43,544 | INFO     | event service: False
[2025-11-23 16:46:22] 2025-11-23 23:45:43,544 | INFO     | sizes: {0: 2298586, 1: 2298841, 3: 2299103, 11: 2299131, 16284: 2331975, 16293: 2340983, 16295: 2341167, 16298: 2341413}
[2025-11-23 16:46:22] 2025-11-23 23:45:43,544 | INFO     | --------------------------------------------------
[2025-11-23 16:46:22] 2025-11-23 23:45:43,544 | INFO     | 
[2025-11-23 16:46:22] 2025-11-23 23:45:43,544 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-23 16:46:22] 2025-11-23 23:45:43,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,562 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 16:46:22] 2025-11-23 23:45:43,562 | INFO     | job 6895336013 has completed (purged errors)
[2025-11-23 16:46:22] 2025-11-23 23:45:43,562 | INFO     | overall cleanup function is called
[2025-11-23 16:46:22] 2025-11-23 23:45:44,577 | INFO     | --- collectZombieJob: --- 10, [1804817]
[2025-11-23 16:46:22] 2025-11-23 23:45:44,577 | INFO     | zombie collector waiting for pid 1804817
[2025-11-23 16:46:22] 2025-11-23 23:45:44,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 16:46:22] 2025-11-23 23:45:44,577 | INFO     | collected zombie processes
[2025-11-23 16:46:22] 2025-11-23 23:45:44,577 | INFO     | will attempt to kill all subprocesses of pid=1804817
[2025-11-23 16:46:22] 2025-11-23 23:45:44,694 | INFO     | process IDs to be killed: [1804817] (in reverse order)
[2025-11-23 16:46:22] 2025-11-23 23:45:44,744 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 16:46:22] 2025-11-23 23:45:44,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 16:46:22] 2025-11-23 23:45:44,748 | INFO     | did not find any defunct processes belonging to 1804817
[2025-11-23 16:46:22] 2025-11-23 23:45:44,751 | INFO     | did not find any defunct processes belonging to 1804817
[2025-11-23 16:46:22] 2025-11-23 23:45:44,752 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 16:46:22] 2025-11-23 23:45:44,752 | INFO     | ready for new job
[2025-11-23 16:46:22] 2025-11-23 23:45:44,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 16:46:22] 2025-11-23 23:45:44,754 | INFO     | ***************************************
[2025-11-23 16:46:22] 2025-11-23 23:45:44,754 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 16:46:22] 2025-11-23 23:45:44,754 | INFO     | ***************************************
[2025-11-23 16:46:22] 2025-11-23 23:45:44,754 | INFO     | 
[2025-11-23 16:46:22] 2025-11-23 23:45:44,755 | INFO     | architecture information:
[2025-11-23 16:46:22] 2025-11-23 23:45:44,755 | INFO     | executing command: cat /etc/os-release
[2025-11-23 16:46:22] 2025-11-23 23:45:44,766 | INFO     | cat /etc/os-release:
[2025-11-23 16:46:22] NAME="CentOS Linux"
[2025-11-23 16:46:22] VERSION="7 (Core)"
[2025-11-23 16:46:22] ID="centos"
[2025-11-23 16:46:22] ID_LIKE="rhel fedora"
[2025-11-23 16:46:22] VERSION_ID="7"
[2025-11-23 16:46:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 16:46:22] ANSI_COLOR="0;31"
[2025-11-23 16:46:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 16:46:22] HOME_URL="https://www.centos.org/"
[2025-11-23 16:46:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 16:46:22] 
[2025-11-23 16:46:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 16:46:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 16:46:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 16:46:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 16:46:22] 
[2025-11-23 16:46:22] 2025-11-23 23:45:44,766 | INFO     | ***************************************
[2025-11-23 16:46:22] 2025-11-23 23:45:45,269 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-23 16:46:22] 2025-11-23 23:45:45,282 | INFO     | sufficient remaining disk space (379686223872 B)
[2025-11-23 16:46:22] 2025-11-23 23:45:45,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 16:46:22] 2025-11-23 23:45:45,283 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 16:46:22] 2025-11-23 23:45:45,283 | INFO     | update_server=False
[2025-11-23 16:46:22] 2025-11-23 23:45:45,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 16:46:22] 2025-11-23 23:45:45,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:46:22] 2025-11-23 23:45:45,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:46:22] 2025-11-23 23:45:45,441 | INFO     | aborting loop
[2025-11-23 16:46:22] 2025-11-23 23:45:45,584 | INFO     | all payload control threads have been joined
[2025-11-23 16:46:22] 2025-11-23 23:45:45,836 | INFO     | all data control threads have been joined
[2025-11-23 16:46:22] 2025-11-23 23:45:45,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 16:46:22] 2025-11-23 23:45:46,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 16:46:22] 2025-11-23 23:45:46,287 | INFO     | [job] retrieve thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:46,288 | INFO     | [job] queue monitor thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:46,446 | INFO     | [job] job monitor thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:46,511 | INFO     | [data] copytool_in thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:46,589 | INFO     | [payload] control thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:46,732 | INFO     | [payload] validate_post thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:46,841 | INFO     | [data] control thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:46,843 | INFO     | all job control threads have been joined
[2025-11-23 16:46:22] 2025-11-23 23:45:46,949 | INFO     | [payload] failed_post thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:47,168 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:47,419 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:47,425 | INFO     | [job] validate thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:47,514 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:47,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:47,848 | INFO     | [job] control thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:48,243 | INFO     | [data] copytool_out thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:45:49,915 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 16:46:22] 2025-11-23 23:46:16,370 | INFO     | PID=1798059 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 16:46:22] 2025-11-23 23:46:16,370 | INFO     | .. there are 3 such processes running
[2025-11-23 16:46:22] 2025-11-23 23:46:16,370 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 16:46:22] 2025-11-23 23:46:16,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 16:46:22] 2025-11-23 23:46:16,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 16:46:22] 2025-11-23 23:46:17,423 | INFO     | [monitor] cgroup control has ended
[2025-11-23 16:46:22] 2025-11-23 23:46:17,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134988827596608)>', '<ExcThread(monitor, started 134988422944512)>']
[2025-11-23 16:46:22] 2025-11-23 23:46:18,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 16:46:22] 2025-11-23 23:46:18,378 | INFO     | [monitor] control thread has ended
[2025-11-23 16:46:22] 2025-11-23 23:46:22,555 | INFO     | all workflow threads have been joined
[2025-11-23 16:46:22] 2025-11-23 23:46:22,555 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 16:46:22] 2025-11-23 23:46:22,555 | INFO     | traces error code: 0
[2025-11-23 16:46:22] 2025-11-23 23:46:22,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 16:46:22] 2025-11-23 23:46:22,632 [wrapper] ==== pilot stdout END ====
[2025-11-23 16:46:22] 2025-11-23 23:46:22,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 16:46:22] 2025-11-23 23:46:22,635 [wrapper] pilotpid: 1798059
[2025-11-23 16:46:22] 2025-11-23 23:46:22,637 [wrapper] Pilot exit status: 0
[2025-11-23 16:46:22] 2025-11-23 23:46:22,644 [wrapper] pandaids: 6895336013
[2025-11-23 16:46:22] 2025-11-23 23:46:22,676 [wrapper] cleanup supervisor_pilot 1914058 1798060
[2025-11-23 16:46:22] 2025-11-23 23:46:22,678 [wrapper] Test setup, not cleaning
[2025-11-23 16:46:22] 2025-11-23 23:46:22,680 [wrapper] apfmon messages muted
[2025-11-23 16:46:22] 2025-11-23 23:46:22,681 [wrapper] ==== wrapper stdout END ====
[2025-11-23 16:46:22] 2025-11-23 23:46:22,683 [wrapper] ==== wrapper stderr END ====
[2025-11-23 16:46:22]  *** Error codes and diagnostics ***
[2025-11-23 16:46:22]     "exeErrorCode": 0,
[2025-11-23 16:46:22]     "exeErrorDiag": "",
[2025-11-23 16:46:22]     "pilotErrorCode": 0,
[2025-11-23 16:46:22]     "pilotErrorDiag": "",
[2025-11-23 16:46:22]  *** Listing of results directory ***
[2025-11-23 16:46:22] total 1318208
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc    576529 Nov 21 21:55 pilot3.tar.gz
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc      5112 Nov 21 22:06 queuedata.json
[2025-11-23 16:46:22] -rwx------ 1 boinc boinc     36292 Nov 21 22:08 runpilot2-wrapper.sh
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc       100 Nov 23 12:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 16:46:22] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 12:13 run_atlas
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc       105 Nov 23 12:13 job.xml
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc      9769 Nov 23 12:13 init_data.xml
[2025-11-23 16:46:22] -rw-r--r-- 2 boinc boinc 410815120 Nov 23 12:13 EVNT.47483658._000264.pool.root.1
[2025-11-23 16:46:22] -rw-r--r-- 2 boinc boinc     15847 Nov 23 12:13 start_atlas.sh
[2025-11-23 16:46:22] drwxrwx--x 2 boinc boinc      4096 Nov 23 12:13 shared
[2025-11-23 16:46:22] -rw-r--r-- 2 boinc boinc    590099 Nov 23 12:13 input.tar.gz
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc         0 Nov 23 12:13 boinc_lockfile
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc      2785 Nov 23 12:13 pandaJob.out
[2025-11-23 16:46:22] -rw------- 1 boinc boinc    989786 Nov 23 12:13 agis_schedconf.cvmfs.json
[2025-11-23 16:46:22] drwx------ 5 boinc boinc      4096 Nov 23 12:13 pilot3
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc       532 Nov 23 16:40 boinc_task_state.xml
[2025-11-23 16:46:22] -rw------- 1 boinc boinc 927191704 Nov 23 16:45 HITS.47556137._002607.pool.root.1
[2025-11-23 16:46:22] -rw------- 1 boinc boinc        95 Nov 23 16:45 pilot_heartbeat.json
[2025-11-23 16:46:22] -rw------- 1 boinc boinc      1036 Nov 23 16:45 memory_monitor_summary.json
[2025-11-23 16:46:22] -rw------- 1 boinc boinc   1526164 Nov 23 16:45 agis_ddmendpoints.agis.ALL.json
[2025-11-23 16:46:22] -rw------- 1 boinc boinc   1573493 Nov 23 16:45 log.47556137._002607.job.log.tgz.1
[2025-11-23 16:46:22] -rw------- 1 boinc boinc      8594 Nov 23 16:45 heartbeat.json
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc        29 Nov 23 16:46 wrapper_checkpoint.txt
[2025-11-23 16:46:22] -rw------- 1 boinc boinc      4831 Nov 23 16:46 pilotlog.txt
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc      8192 Nov 23 16:46 boinc_mmap_file
[2025-11-23 16:46:22] -rw------- 1 boinc boinc   2381511 Nov 23 16:46 log.47556137._002607.job.log.1
[2025-11-23 16:46:22] -rw------- 1 boinc boinc       353 Nov 23 16:46 output.list
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc       620 Nov 23 16:46 runtime_log
[2025-11-23 16:46:22] -rw------- 1 boinc boinc   3973120 Nov 23 16:46 result.tar.gz
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc      8968 Nov 23 16:46 runtime_log.err
[2025-11-23 16:46:22] -rw------- 1 boinc boinc       662 Nov 23 16:46 Qu5MDmJ2ug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmxJKDmPyS3Pm.diag
[2025-11-23 16:46:22] -rw-r--r-- 1 boinc boinc     21385 Nov 23 16:46 stderr.txt
[2025-11-23 16:46:22] HITS file was successfully produced:
[2025-11-23 16:46:22] -rw------- 1 boinc boinc 927191704 Nov 23 16:45 shared/HITS.pool.root.1
[2025-11-23 16:46:22]  *** Contents of shared directory: ***
[2025-11-23 16:46:22] total 1311136
[2025-11-23 16:46:22] -rw-r--r-- 2 boinc boinc 410815120 Nov 23 12:13 ATLAS.root_0
[2025-11-23 16:46:22] -rw-r--r-- 2 boinc boinc     15847 Nov 23 12:13 start_atlas.sh
[2025-11-23 16:46:22] -rw-r--r-- 2 boinc boinc    590099 Nov 23 12:13 input.tar.gz
[2025-11-23 16:46:22] -rw------- 1 boinc boinc 927191704 Nov 23 16:45 HITS.pool.root.1
[2025-11-23 16:46:22] -rw------- 1 boinc boinc   3973120 Nov 23 16:46 result.tar.gz
16:46:24 (1794157): run_atlas exited; CPU time 127160.800738
16:46:24 (1794157): called boinc_finish(0)

</stderr_txt>
]]>

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