Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:16:56 (28613): wrapper (7.7.26015): starting
10:16:56 (28613): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 10:16:56] Arguments: --nthreads 8
[2025-11-23 10:16:56] Threads: 8
[2025-11-23 10:16:56] Checking for CVMFS
[2025-11-23 10:16:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:16:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:16:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:16:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:16:57] 2.11.2.0 21766 113547 140640 153213 1 49 16113373 18432001 1885 130560 0 81995945 99.974 4736199 26892 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 10:16:57] CVMFS is ok
[2025-11-23 10:16:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:16:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:16:57] Further information can be found at the LHC@home message board.
[2025-11-23 10:16:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:16:57] Checking for apptainer binary...
[2025-11-23 10:16:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:16:57] Running /usr/bin/apptainer --version
[2025-11-23 10:16:57] apptainer version 1.3.2-1.el7
[2025-11-23 10:16:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:16:57] c-206-18.aglt2.org
[2025-11-23 10:16:57] apptainer works
[2025-11-23 10:16:57] Set ATHENA_PROC_NUMBER=8
[2025-11-23 10:16:57] Set ATHENA_CORE_NUMBER=8
[2025-11-23 10:16:58] Starting ATLAS job with PandaID=6895344242
[2025-11-23 10:16:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 05:34:27]  *** The last 200 lines of the pilot log: ***
[2025-11-24 05:34:27] 2025-11-24 10:33:52,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 05:34:27] 2025-11-24 10:33:53,874 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 05:34:27] 2025-11-24 10:33:53,880 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2450.1666666666665
[2025-11-24 05:34:27] 2025-11-24 10:33:53,884 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895344242/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 05:34:27] 2025-11-24 10:33:53,885 | INFO     | extracted standard info from prmon json
[2025-11-24 05:34:27] 2025-11-24 10:33:53,885 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 05:34:27] 2025-11-24 10:33:53,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 05:34:27] 2025-11-24 10:33:53,916 | INFO     | fitting pss+swap vs Time
[2025-11-24 05:34:27] 2025-11-24 10:33:53,917 | INFO     | sum of square deviations: 456989839487.0303
[2025-11-24 05:34:27] 2025-11-24 10:33:53,943 | INFO     | sum of deviations: 1705900281974.1177
[2025-11-24 05:34:27] 2025-11-24 10:33:53,943 | INFO     | mean x: 1763945733.125659
[2025-11-24 05:34:27] 2025-11-24 10:33:53,943 | INFO     | mean y: 2872447.509666081
[2025-11-24 05:34:27] 2025-11-24 10:33:53,943 | INFO     | intersect: -6581771812.642434
[2025-11-24 05:34:27] 2025-11-24 10:33:53,944 | INFO     | chi2: 6.610200327118034
[2025-11-24 05:34:27] 2025-11-24 10:33:53,945 | INFO     | sum of square deviations: 450992911642.5648
[2025-11-24 05:34:27] 2025-11-24 10:33:53,970 | INFO     | sum of deviations: 2072050528759.8093
[2025-11-24 05:34:27] 2025-11-24 10:33:53,970 | INFO     | mean x: 1763945580.62842
[2025-11-24 05:34:27] 2025-11-24 10:33:53,971 | INFO     | mean y: 2881754.887908208
[2025-11-24 05:34:27] 2025-11-24 10:33:53,971 | INFO     | intersect: -8101423831.053122
[2025-11-24 05:34:27] 2025-11-24 10:33:53,972 | INFO     | chi2: 3.576176926902786
[2025-11-24 05:34:27] 2025-11-24 10:33:53,972 | INFO     | current chi2=3.576176926902786 (change=45.899114248751445 %)
[2025-11-24 05:34:27] 2025-11-24 10:33:53,974 | INFO     | sum of square deviations: 445048682460.58093
[2025-11-24 05:34:27] 2025-11-24 10:33:54,016 | INFO     | sum of deviations: 2263226106393.269
[2025-11-24 05:34:27] 2025-11-24 10:33:54,016 | INFO     | mean x: 1763945428.1312056
[2025-11-24 05:34:27] 2025-11-24 10:33:54,016 | INFO     | mean y: 2886658.890070922
[2025-11-24 05:34:27] 2025-11-24 10:33:54,016 | INFO     | intersect: -8967384460.951286
[2025-11-24 05:34:27] 2025-11-24 10:33:54,018 | INFO     | chi2: 2.694423924431275
[2025-11-24 05:34:27] 2025-11-24 10:33:54,018 | INFO     | current chi2=2.694423924431275 (change=24.656302540242862 %)
[2025-11-24 05:34:27] 2025-11-24 10:33:54,018 | INFO     | right removable region: 1127
[2025-11-24 05:34:27] 2025-11-24 10:33:54,020 | INFO     | sum of square deviations: 450992477322.5649
[2025-11-24 05:34:27] 2025-11-24 10:33:54,061 | INFO     | sum of deviations: 1411145995815.0093
[2025-11-24 05:34:27] 2025-11-24 10:33:54,062 | INFO     | mean x: 1763945885.62842
[2025-11-24 05:34:27] 2025-11-24 10:33:54,062 | INFO     | mean y: 2879934.0617828774
[2025-11-24 05:34:27] 2025-11-24 10:33:54,062 | INFO     | intersect: -5516469719.210941
[2025-11-24 05:34:27] 2025-11-24 10:33:54,064 | INFO     | chi2: 4.577054195158383
[2025-11-24 05:34:27] 2025-11-24 10:33:54,064 | INFO     | current chi2=4.577054195158383 (change=30.757708259139516 %)
[2025-11-24 05:34:27] 2025-11-24 10:33:54,066 | INFO     | sum of square deviations: 445047951681.0973
[2025-11-24 05:34:27] 2025-11-24 10:33:54,110 | INFO     | sum of deviations: 1336767894167.792
[2025-11-24 05:34:27] 2025-11-24 10:33:54,110 | INFO     | mean x: 1763946038.1294327
[2025-11-24 05:34:27] 2025-11-24 10:33:54,110 | INFO     | mean y: 2881841.8164893617
[2025-11-24 05:34:27] 2025-11-24 10:33:54,110 | INFO     | intersect: -5295393146.101073
[2025-11-24 05:34:27] 2025-11-24 10:33:54,112 | INFO     | chi2: 4.516501906830843
[2025-11-24 05:34:27] 2025-11-24 10:33:54,112 | INFO     | current chi2=4.516501906830843 (change=1.3229532739986416 %)
[2025-11-24 05:34:27] 2025-11-24 10:33:54,112 | INFO     | left removable region: 20
[2025-11-24 05:34:27] 2025-11-24 10:33:54,114 | INFO     | sum of square deviations: 420652018178.5601
[2025-11-24 05:34:27] 2025-11-24 10:33:54,127 | INFO     | time since job start (69405s) is within the limit (172800.0s)
[2025-11-24 05:34:27] 2025-11-24 10:33:54,154 | INFO     | sum of deviations: 1822652360383.6833
[2025-11-24 05:34:27] 2025-11-24 10:33:54,154 | INFO     | mean x: 1763946007.6350496
[2025-11-24 05:34:27] 2025-11-24 10:33:54,155 | INFO     | mean y: 2899529.657633243
[2025-11-24 05:34:27] 2025-11-24 10:33:54,155 | INFO     | intersect: -7640140834.980903
[2025-11-24 05:34:27] 2025-11-24 10:33:54,156 | INFO     | chi2: 0.46490895025389056
[2025-11-24 05:34:27] 2025-11-24 10:33:54,157 | INFO     | current memory leak: 4.33 B/s (using 1107 data points, chi2=0.46)
[2025-11-24 05:34:27] 2025-11-24 10:33:54,158 | INFO     | could have reported an average CPU frequency of 2632 MHz (41 samples)
[2025-11-24 05:34:27] 2025-11-24 10:33:54,158 | INFO     | ..............................
[2025-11-24 05:34:27] 2025-11-24 10:33:54,158 | INFO     | . Timing measurements:
[2025-11-24 05:34:27] 2025-11-24 10:33:54,159 | INFO     | . get job = 0 s
[2025-11-24 05:34:27] 2025-11-24 10:33:54,159 | INFO     | . initial setup = 2 s
[2025-11-24 05:34:27] 2025-11-24 10:33:54,159 | INFO     | . payload setup = 5 s
[2025-11-24 05:34:27] 2025-11-24 10:33:54,159 | INFO     | . stage-in = 0 s
[2025-11-24 05:34:27] 2025-11-24 10:33:54,159 | INFO     | . payload execution = 69370 s
[2025-11-24 05:34:27] 2025-11-24 10:33:54,159 | INFO     | . stage-out = 4 s
[2025-11-24 05:34:27] 2025-11-24 10:33:54,160 | INFO     | . log creation = 0 s
[2025-11-24 05:34:27] 2025-11-24 10:33:54,160 | INFO     | ..............................
[2025-11-24 05:34:27] 2025-11-24 10:33:54,319 | INFO     | 
[2025-11-24 05:34:27] 2025-11-24 10:33:54,320 | INFO     | job summary report
[2025-11-24 05:34:27] 2025-11-24 10:33:54,320 | INFO     | --------------------------------------------------
[2025-11-24 05:34:27] 2025-11-24 10:33:54,320 | INFO     | PanDA job id: 6895344242
[2025-11-24 05:34:27] 2025-11-24 10:33:54,320 | INFO     | task id: 47556137
[2025-11-24 05:34:27] 2025-11-24 10:33:54,320 | INFO     | errors: (none)
[2025-11-24 05:34:27] 2025-11-24 10:33:54,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 05:34:27] 2025-11-24 10:33:54,321 | INFO     | pilot state: finished 
[2025-11-24 05:34:27] 2025-11-24 10:33:54,321 | INFO     | transexitcode: 0
[2025-11-24 05:34:27] 2025-11-24 10:33:54,321 | INFO     | exeerrorcode: 0
[2025-11-24 05:34:27] 2025-11-24 10:33:54,321 | INFO     | exeerrordiag: 
[2025-11-24 05:34:27] 2025-11-24 10:33:54,321 | INFO     | exitcode: 0
[2025-11-24 05:34:27] 2025-11-24 10:33:54,322 | INFO     | exitmsg: OK
[2025-11-24 05:34:27] 2025-11-24 10:33:54,322 | INFO     | cpuconsumptiontime: 537463 s
[2025-11-24 05:34:27] 2025-11-24 10:33:54,322 | INFO     | nevents: 1000
[2025-11-24 05:34:27] 2025-11-24 10:33:54,322 | INFO     | neventsw: 0
[2025-11-24 05:34:27] 2025-11-24 10:33:54,322 | INFO     | pid: 6487
[2025-11-24 05:34:27] 2025-11-24 10:33:54,322 | INFO     | pgrp: 6487
[2025-11-24 05:34:27] 2025-11-24 10:33:54,323 | INFO     | corecount: 8
[2025-11-24 05:34:27] 2025-11-24 10:33:54,323 | INFO     | event service: False
[2025-11-24 05:34:27] 2025-11-24 10:33:54,323 | INFO     | sizes: {0: 2297927, 1: 2298783, 2: 2298783, 5: 2299073, 12: 2299129, 69379: 2355542, 69384: 2364592, 69389: 2364878}
[2025-11-24 05:34:27] 2025-11-24 10:33:54,323 | INFO     | --------------------------------------------------
[2025-11-24 05:34:27] 2025-11-24 10:33:54,323 | INFO     | 
[2025-11-24 05:34:27] 2025-11-24 10:33:54,324 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-24 05:34:27] 2025-11-24 10:33:54,341 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,342 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,342 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,345 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 05:34:27] 2025-11-24 10:33:54,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,345 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 05:34:27] 2025-11-24 10:33:54,345 | INFO     | job 6895344242 has completed (purged errors)
[2025-11-24 05:34:27] 2025-11-24 10:33:54,345 | INFO     | overall cleanup function is called
[2025-11-24 05:34:27] 2025-11-24 10:33:55,362 | INFO     | --- collectZombieJob: --- 10, [6487]
[2025-11-24 05:34:27] 2025-11-24 10:33:55,362 | INFO     | zombie collector waiting for pid 6487
[2025-11-24 05:34:27] 2025-11-24 10:33:55,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 05:34:27] 2025-11-24 10:33:55,363 | INFO     | collected zombie processes
[2025-11-24 05:34:27] 2025-11-24 10:33:55,363 | INFO     | will attempt to kill all subprocesses of pid=6487
[2025-11-24 05:34:27] 2025-11-24 10:33:55,534 | INFO     | process IDs to be killed: [6487] (in reverse order)
[2025-11-24 05:34:27] 2025-11-24 10:33:55,597 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 05:34:27] 2025-11-24 10:33:55,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 05:34:27] 2025-11-24 10:33:55,602 | INFO     | did not find any defunct processes belonging to 6487
[2025-11-24 05:34:27] 2025-11-24 10:33:55,607 | INFO     | did not find any defunct processes belonging to 6487
[2025-11-24 05:34:27] 2025-11-24 10:33:55,609 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 05:34:27] 2025-11-24 10:33:55,609 | INFO     | ready for new job
[2025-11-24 05:34:27] 2025-11-24 10:33:55,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 05:34:27] 2025-11-24 10:33:55,614 | INFO     | ***************************************
[2025-11-24 05:34:27] 2025-11-24 10:33:55,615 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 05:34:27] 2025-11-24 10:33:55,615 | INFO     | ***************************************
[2025-11-24 05:34:27] 2025-11-24 10:33:55,615 | INFO     | 
[2025-11-24 05:34:27] 2025-11-24 10:33:55,616 | INFO     | architecture information:
[2025-11-24 05:34:27] 2025-11-24 10:33:55,617 | INFO     | executing command: cat /etc/os-release
[2025-11-24 05:34:27] 2025-11-24 10:33:55,635 | INFO     | cat /etc/os-release:
[2025-11-24 05:34:27] NAME="CentOS Linux"
[2025-11-24 05:34:27] VERSION="7 (Core)"
[2025-11-24 05:34:27] ID="centos"
[2025-11-24 05:34:27] ID_LIKE="rhel fedora"
[2025-11-24 05:34:27] VERSION_ID="7"
[2025-11-24 05:34:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 05:34:27] ANSI_COLOR="0;31"
[2025-11-24 05:34:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 05:34:27] HOME_URL="https://www.centos.org/"
[2025-11-24 05:34:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 05:34:27] 
[2025-11-24 05:34:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 05:34:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 05:34:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 05:34:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 05:34:27] 
[2025-11-24 05:34:27] 2025-11-24 10:33:55,635 | INFO     | ***************************************
[2025-11-24 05:34:27] 2025-11-24 10:33:56,138 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-24 05:34:27] 2025-11-24 10:33:56,155 | INFO     | sufficient remaining disk space (24968691712 B)
[2025-11-24 05:34:27] 2025-11-24 10:33:56,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 05:34:27] 2025-11-24 10:33:56,155 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 05:34:27] 2025-11-24 10:33:56,156 | INFO     | update_server=False
[2025-11-24 05:34:27] 2025-11-24 10:33:56,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 05:34:27] 2025-11-24 10:33:56,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:34:27] 2025-11-24 10:33:56,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:34:27] 2025-11-24 10:33:56,157 | INFO     | aborting loop
[2025-11-24 05:34:27] 2025-11-24 10:33:56,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 05:34:27] 2025-11-24 10:33:57,077 | INFO     | all data control threads have been joined
[2025-11-24 05:34:27] 2025-11-24 10:33:57,102 | INFO     | all payload control threads have been joined
[2025-11-24 05:34:27] 2025-11-24 10:33:57,161 | INFO     | [job] retrieve thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:57,162 | INFO     | [job] queue monitor thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:57,162 | INFO     | [job] job monitor thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:57,197 | INFO     | all job control threads have been joined
[2025-11-24 05:34:27] 2025-11-24 10:33:57,215 | INFO     | [data] copytool_in thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:57,469 | INFO     | [payload] failed_post thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:57,856 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:57,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:57,996 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:58,025 | INFO     | [payload] validate_post thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:58,085 | INFO     | [data] control thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:58,107 | INFO     | [payload] control thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:58,202 | INFO     | [job] control thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:58,283 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:58,296 | INFO     | [job] validate thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:58,485 | INFO     | [data] copytool_out thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:33:59,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 05:34:27] 2025-11-24 10:34:03,217 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 05:34:27] 2025-11-24 10:34:03,733 | INFO     | [monitor] cgroup control has ended
[2025-11-24 05:34:27] 2025-11-24 10:34:04,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558033237824)>', '<ExcThread(monitor, started 140557603026688)>']
[2025-11-24 05:34:27] 2025-11-24 10:34:09,055 | INFO     | all workflow threads have been joined
[2025-11-24 05:34:27] 2025-11-24 10:34:09,055 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 05:34:27] 2025-11-24 10:34:09,056 | INFO     | traces error code: 0
[2025-11-24 05:34:27] 2025-11-24 10:34:09,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 05:34:27] 2025-11-24 10:34:26,166 | INFO     | 69409s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 05:34:27] 2025-11-24 10:34:27,373 | INFO     | PID=32356 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 05:34:27] 2025-11-24 10:34:27,373 | INFO     | .. there are 3 such processes running
[2025-11-24 05:34:27] 2025-11-24 10:34:27,373 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 05:34:27] 2025-11-24 10:34:27,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 05:34:27] 2025-11-24 10:34:27,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 05:34:27] 2025-11-24 10:34:27,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 05:34:27] 2025-11-24 10:34:27,374 | INFO     | [monitor] control thread has ended
[2025-11-24 05:34:27] 2025-11-24 10:34:27,504 [wrapper] ==== pilot stdout END ====
[2025-11-24 05:34:27] 2025-11-24 10:34:27,506 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 05:34:27] 2025-11-24 10:34:27,509 [wrapper] pilotpid: 32356
[2025-11-24 05:34:27] 2025-11-24 10:34:27,512 [wrapper] Pilot exit status: 0
[2025-11-24 05:34:27] 2025-11-24 10:34:27,523 [wrapper] pandaids: 6895344242
[2025-11-24 05:34:27] 2025-11-24 10:34:27,564 [wrapper] cleanup supervisor_pilot 26941 32357
[2025-11-24 05:34:27] 2025-11-24 10:34:27,567 [wrapper] Test setup, not cleaning
[2025-11-24 05:34:27] 2025-11-24 10:34:27,569 [wrapper] apfmon messages muted
[2025-11-24 05:34:27] 2025-11-24 10:34:27,571 [wrapper] ==== wrapper stdout END ====
[2025-11-24 05:34:27] 2025-11-24 10:34:27,574 [wrapper] ==== wrapper stderr END ====
[2025-11-24 05:34:27]  *** Error codes and diagnostics ***
[2025-11-24 05:34:27]     "exeErrorCode": 0,
[2025-11-24 05:34:27]     "exeErrorDiag": "",
[2025-11-24 05:34:27]     "pilotErrorCode": 0,
[2025-11-24 05:34:27]     "pilotErrorDiag": "",
[2025-11-24 05:34:27]  *** Listing of results directory ***
[2025-11-24 05:34:27] total 1326400
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 11:54 pilot3.tar.gz
[2025-11-24 05:34:27] -rwx------ 1 boincer umatlas     36292 Nov 22 11:55 runpilot2-wrapper.sh
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 11:55 queuedata.json
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas       100 Nov 23 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 05:34:27] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 10:16 run_atlas
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas       105 Nov 23 10:16 job.xml
[2025-11-24 05:34:27] -rw-r--r-- 2 boincer umatlas 411426120 Nov 23 10:16 EVNT.47483658._000438.pool.root.1
[2025-11-24 05:34:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 10:16 start_atlas.sh
[2025-11-24 05:34:27] drwxrwx--x 2 boincer umatlas      4096 Nov 23 10:16 shared
[2025-11-24 05:34:27] -rw-r--r-- 2 boincer umatlas    590098 Nov 23 10:16 input.tar.gz
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas         0 Nov 23 10:16 boinc_lockfile
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 10:16 pandaJob.out
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas        57 Nov 23 10:16 setup.sh.local
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas    989785 Nov 23 10:17 agis_schedconf.cvmfs.json
[2025-11-24 05:34:27] drwx------ 5 boincer umatlas      4096 Nov 23 10:17 pilot3
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas       533 Nov 24 05:13 boinc_task_state.xml
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas      5954 Nov 24 05:27 init_data.xml
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas 919046582 Nov 24 05:33 HITS.47556137._004337.pool.root.1
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas      1067 Nov 24 05:33 memory_monitor_summary.json
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas   1526164 Nov 24 05:33 agis_ddmendpoints.agis.ALL.json
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas   2318647 Nov 24 05:33 log.47556137._004337.job.log.tgz.1
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas        95 Nov 24 05:33 pilot_heartbeat.json
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas      8677 Nov 24 05:33 heartbeat.json
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 05:34 boinc_mmap_file
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas        29 Nov 24 05:34 wrapper_checkpoint.txt
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas       936 Nov 24 05:34 pilotlog.txt
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas   9602699 Nov 24 05:34 log.47556137._004337.job.log.1
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas       353 Nov 24 05:34 output.list
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas       620 Nov 24 05:34 runtime_log
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas  11939840 Nov 24 05:34 result.tar.gz
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 05:34 runtime_log.err
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas       668 Nov 24 05:34 9M6KDmJ45g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxHKKDm0aE8Gm.diag
[2025-11-24 05:34:27] -rw-r--r-- 1 boincer umatlas     21310 Nov 24 05:34 stderr.txt
[2025-11-24 05:34:27] HITS file was successfully produced:
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas 919046582 Nov 24 05:33 shared/HITS.pool.root.1
[2025-11-24 05:34:27]  *** Contents of shared directory: ***
[2025-11-24 05:34:27] total 1311552
[2025-11-24 05:34:27] -rw-r--r-- 2 boincer umatlas 411426120 Nov 23 10:16 ATLAS.root_0
[2025-11-24 05:34:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 10:16 start_atlas.sh
[2025-11-24 05:34:27] -rw-r--r-- 2 boincer umatlas    590098 Nov 23 10:16 input.tar.gz
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas 919046582 Nov 24 05:33 HITS.pool.root.1
[2025-11-24 05:34:27] -rw------- 1 boincer umatlas  11939840 Nov 24 05:34 result.tar.gz
05:34:28 (28613): run_atlas exited; CPU time 536781.503043
05:34:28 (28613): called boinc_finish(0)

</stderr_txt>
]]>

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