Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:17:56 (1216512): wrapper (7.7.26015): starting
09:17:56 (1216512): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 09:17:56] Arguments: --nthreads 9
[2025-11-23 09:17:56] Threads: 9
[2025-11-23 09:17:56] Checking for CVMFS
[2025-11-23 09:17:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 09:17:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 09:17:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 09:17:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 09:17:58] 2.13.3.0 14328 25817 141844 153211 0 276 30397312 40960001 35080 16776704 0 324182958 99.730 221906703 50533 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 09:17:58] CVMFS is ok
[2025-11-23 09:17:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 09:17:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 09:17:58] Further information can be found at the LHC@home message board.
[2025-11-23 09:17:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 09:17:58] Checking for apptainer binary...
[2025-11-23 09:17:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 09:17:58] Running /usr/bin/apptainer --version
[2025-11-23 09:17:58] apptainer version 1.4.4-1.el9
[2025-11-23 09:17:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 09:17:59] c8-16-2.aglt2.org
[2025-11-23 09:17:59] apptainer works
[2025-11-23 09:17:59] Set ATHENA_PROC_NUMBER=9
[2025-11-23 09:17:59] Set ATHENA_CORE_NUMBER=9
[2025-11-23 09:17:59] Starting ATLAS job with PandaID=6895335195
[2025-11-23 09:17:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:11:40]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:11:40] 2025-11-23 22:10:41,639 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:11:40] 2025-11-23 22:10:41,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:11:40] 2025-11-23 22:10:41,643 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:11:40] 2025-11-23 22:10:41,644 | INFO     | sum of square deviations: 30777940029.892014
[2025-11-23 17:11:40] 2025-11-23 22:10:41,646 | INFO     | sum of deviations: 138139160785.95917
[2025-11-23 17:11:40] 2025-11-23 22:10:41,646 | INFO     | mean x: 1763921723.1922247
[2025-11-23 17:11:40] 2025-11-23 22:10:41,646 | INFO     | mean y: 2961206.9330453565
[2025-11-23 17:11:40] 2025-11-23 22:10:41,646 | INFO     | intersect: -7913964561.888521
[2025-11-23 17:11:40] 2025-11-23 22:10:41,647 | INFO     | chi2: 12.032195355106051
[2025-11-23 17:11:40] 2025-11-23 22:10:41,647 | INFO     | sum of square deviations: 29791755005.207527
[2025-11-23 17:11:40] 2025-11-23 22:10:41,650 | INFO     | sum of deviations: 317032951006.906
[2025-11-23 17:11:40] 2025-11-23 22:10:41,650 | INFO     | mean x: 1763921570.7052402
[2025-11-23 17:11:40] 2025-11-23 22:10:41,650 | INFO     | mean y: 2988872.080786026
[2025-11-23 17:11:40] 2025-11-23 22:10:41,650 | INFO     | intersect: -18768018771.06305
[2025-11-23 17:11:40] 2025-11-23 22:10:41,650 | INFO     | chi2: 7.935903759469522
[2025-11-23 17:11:40] 2025-11-23 22:10:41,650 | INFO     | current chi2=7.935903759469522 (change=34.04442393713466 %)
[2025-11-23 17:11:40] 2025-11-23 22:10:41,650 | INFO     | sum of square deviations: 28826872705.364468
[2025-11-23 17:11:40] 2025-11-23 22:10:41,653 | INFO     | sum of deviations: 489943123582.10583
[2025-11-23 17:11:40] 2025-11-23 22:10:41,653 | INFO     | mean x: 1763921418.218543
[2025-11-23 17:11:40] 2025-11-23 22:10:41,653 | INFO     | mean y: 3016200.463576159
[2025-11-23 17:11:40] 2025-11-23 22:10:41,653 | INFO     | intersect: -29976689826.91087
[2025-11-23 17:11:40] 2025-11-23 22:10:41,653 | INFO     | chi2: 4.296998596781681
[2025-11-23 17:11:40] 2025-11-23 22:10:41,654 | INFO     | current chi2=4.296998596781681 (change=45.85369572237711 %)
[2025-11-23 17:11:40] 2025-11-23 22:10:41,654 | INFO     | sum of square deviations: 27883060567.857143
[2025-11-23 17:11:40] 2025-11-23 22:10:41,656 | INFO     | sum of deviations: 557578284839.7504
[2025-11-23 17:11:40] 2025-11-23 22:10:41,656 | INFO     | mean x: 1763921265.732143
[2025-11-23 17:11:40] 2025-11-23 22:10:41,657 | INFO     | mean y: 3027107.15625
[2025-11-23 17:11:40] 2025-11-23 22:10:41,657 | INFO     | intersect: -35270152160.44074
[2025-11-23 17:11:40] 2025-11-23 22:10:41,657 | INFO     | chi2: 3.5620921850861382
[2025-11-23 17:11:40] 2025-11-23 22:10:41,657 | INFO     | current chi2=3.5620921850861382 (change=17.102784540026732 %)
[2025-11-23 17:11:40] 2025-11-23 22:10:41,657 | INFO     | right removable region: 447
[2025-11-23 17:11:40] 2025-11-23 22:10:41,657 | INFO     | sum of square deviations: 29791418285.207527
[2025-11-23 17:11:40] 2025-11-23 22:10:41,660 | INFO     | sum of deviations: -31743293164.390564
[2025-11-23 17:11:40] 2025-11-23 22:10:41,660 | INFO     | mean x: 1763921875.7052402
[2025-11-23 17:11:40] 2025-11-23 22:10:41,660 | INFO     | mean y: 2987447.871179039
[2025-11-23 17:11:40] 2025-11-23 22:10:41,660 | INFO     | intersect: 1882478000.6051338
[2025-11-23 17:11:40] 2025-11-23 22:10:41,660 | INFO     | chi2: 8.788311768868793
[2025-11-23 17:11:40] 2025-11-23 22:10:41,660 | INFO     | current chi2=8.788311768868793 (change=26.960030904590205 %)
[2025-11-23 17:11:40] 2025-11-23 22:10:41,661 | INFO     | sum of square deviations: 28826310901.07731
[2025-11-23 17:11:40] 2025-11-23 22:10:41,663 | INFO     | sum of deviations: -64843550965.86325
[2025-11-23 17:11:40] 2025-11-23 22:10:41,663 | INFO     | mean x: 1763922028.209713
[2025-11-23 17:11:40] 2025-11-23 22:10:41,663 | INFO     | mean y: 2992671.514348786
[2025-11-23 17:11:40] 2025-11-23 22:10:41,663 | INFO     | intersect: 3970859677.755192
[2025-11-23 17:11:40] 2025-11-23 22:10:41,664 | INFO     | chi2: 8.696820361910223
[2025-11-23 17:11:40] 2025-11-23 22:10:41,664 | INFO     | current chi2=8.696820361910223 (change=1.04105782048679 %)
[2025-11-23 17:11:40] 2025-11-23 22:10:41,664 | INFO     | left removable region: 20
[2025-11-23 17:11:40] 2025-11-23 22:10:41,664 | INFO     | sum of square deviations: 24142944489.66295
[2025-11-23 17:11:40] 2025-11-23 22:10:41,666 | INFO     | sum of deviations: 309167070653.7682
[2025-11-23 17:11:40] 2025-11-23 22:10:41,667 | INFO     | mean x: 1763921845.2576113
[2025-11-23 17:11:40] 2025-11-23 22:10:41,667 | INFO     | mean y: 3068022.3021077286
[2025-11-23 17:11:40] 2025-11-23 22:10:41,667 | INFO     | intersect: -22585168884.508526
[2025-11-23 17:11:40] 2025-11-23 22:10:41,667 | INFO     | chi2: 0.03918575108603462
[2025-11-23 17:11:40] 2025-11-23 22:10:41,667 | INFO     | current memory leak: 12.81 B/s (using 427 data points, chi2=0.04)
[2025-11-23 17:11:40] 2025-11-23 22:10:41,667 | INFO     | could have reported an average CPU frequency of 3798 MHz (19 samples)
[2025-11-23 17:11:40] 2025-11-23 22:10:41,667 | INFO     | ..............................
[2025-11-23 17:11:40] 2025-11-23 22:10:41,667 | INFO     | . Timing measurements:
[2025-11-23 17:11:40] 2025-11-23 22:10:41,667 | INFO     | . get job = 0 s
[2025-11-23 17:11:40] 2025-11-23 22:10:41,668 | INFO     | . initial setup = 4 s
[2025-11-23 17:11:40] 2025-11-23 22:10:41,668 | INFO     | . payload setup = 28 s
[2025-11-23 17:11:40] 2025-11-23 22:10:41,668 | INFO     | . stage-in = 0 s
[2025-11-23 17:11:40] 2025-11-23 22:10:41,668 | INFO     | . payload execution = 28212 s
[2025-11-23 17:11:40] 2025-11-23 22:10:41,668 | INFO     | . stage-out = 3 s
[2025-11-23 17:11:40] 2025-11-23 22:10:41,668 | INFO     | . log creation = 0 s
[2025-11-23 17:11:40] 2025-11-23 22:10:41,668 | INFO     | ..............................
[2025-11-23 17:11:40] 2025-11-23 22:10:41,727 | INFO     | 
[2025-11-23 17:11:40] 2025-11-23 22:10:41,727 | INFO     | job summary report
[2025-11-23 17:11:40] 2025-11-23 22:10:41,727 | INFO     | --------------------------------------------------
[2025-11-23 17:11:40] 2025-11-23 22:10:41,727 | INFO     | PanDA job id: 6895335195
[2025-11-23 17:11:40] 2025-11-23 22:10:41,727 | INFO     | task id: 47556137
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | errors: (none)
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | pilot state: finished 
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | transexitcode: 0
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | exeerrorcode: 0
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | exeerrordiag: 
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | exitcode: 0
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | exitmsg: OK
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | cpuconsumptiontime: 140589 s
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | nevents: 1000
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | neventsw: 0
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | pid: 1249174
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | pgrp: 1249174
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | corecount: 9
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | event service: False
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | sizes: {0: 2298756, 11: 2298756, 21: 2298840, 22: 2299074, 32: 2299102, 28245: 2337304, 28249: 2346354, 28261: 2346544}
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | --------------------------------------------------
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | 
[2025-11-23 17:11:40] 2025-11-23 22:10:41,728 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 17:11:40] 2025-11-23 22:10:41,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | job 6895335195 has completed (purged errors)
[2025-11-23 17:11:40] 2025-11-23 22:10:41,753 | INFO     | overall cleanup function is called
[2025-11-23 17:11:40] 2025-11-23 22:10:42,769 | INFO     | --- collectZombieJob: --- 10, [1249174]
[2025-11-23 17:11:40] 2025-11-23 22:10:42,769 | INFO     | zombie collector waiting for pid 1249174
[2025-11-23 17:11:40] 2025-11-23 22:10:42,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:11:40] 2025-11-23 22:10:42,769 | INFO     | collected zombie processes
[2025-11-23 17:11:40] 2025-11-23 22:10:42,769 | INFO     | will attempt to kill all subprocesses of pid=1249174
[2025-11-23 17:11:40] 2025-11-23 22:10:43,524 | INFO     | process IDs to be killed: [1249174] (in reverse order)
[2025-11-23 17:11:40] 2025-11-23 22:10:43,749 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:11:40] 2025-11-23 22:10:43,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:11:40] 2025-11-23 22:10:43,780 | INFO     | did not find any defunct processes belonging to 1249174
[2025-11-23 17:11:40] 2025-11-23 22:10:43,811 | INFO     | did not find any defunct processes belonging to 1249174
[2025-11-23 17:11:40] 2025-11-23 22:10:43,812 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:11:40] 2025-11-23 22:10:43,812 | INFO     | ready for new job
[2025-11-23 17:11:40] 2025-11-23 22:10:43,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:11:40] 2025-11-23 22:10:43,814 | INFO     | ***************************************
[2025-11-23 17:11:40] 2025-11-23 22:10:43,814 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:11:40] 2025-11-23 22:10:43,814 | INFO     | ***************************************
[2025-11-23 17:11:40] 2025-11-23 22:10:43,814 | INFO     | 
[2025-11-23 17:11:40] 2025-11-23 22:10:43,819 | INFO     | architecture information:
[2025-11-23 17:11:40] 2025-11-23 22:10:43,820 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:11:40] 2025-11-23 22:10:43,856 | INFO     | cat /etc/os-release:
[2025-11-23 17:11:40] NAME="CentOS Linux"
[2025-11-23 17:11:40] VERSION="7 (Core)"
[2025-11-23 17:11:40] ID="centos"
[2025-11-23 17:11:40] ID_LIKE="rhel fedora"
[2025-11-23 17:11:40] VERSION_ID="7"
[2025-11-23 17:11:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:11:40] ANSI_COLOR="0;31"
[2025-11-23 17:11:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:11:40] HOME_URL="https://www.centos.org/"
[2025-11-23 17:11:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:11:40] 
[2025-11-23 17:11:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:11:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:11:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:11:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:11:40] 
[2025-11-23 17:11:40] 2025-11-23 22:10:43,856 | INFO     | ***************************************
[2025-11-23 17:11:40] 2025-11-23 22:10:44,359 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 17:11:40] 2025-11-23 22:10:44,406 | INFO     | sufficient remaining disk space (162004992000 B)
[2025-11-23 17:11:40] 2025-11-23 22:10:44,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:11:40] 2025-11-23 22:10:44,406 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:11:40] 2025-11-23 22:10:44,406 | INFO     | update_server=False
[2025-11-23 17:11:40] 2025-11-23 22:10:44,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:11:40] 2025-11-23 22:10:44,655 | INFO     | all payload control threads have been joined
[2025-11-23 17:11:40] 2025-11-23 22:10:44,853 | INFO     | all job control threads have been joined
[2025-11-23 17:11:40] 2025-11-23 22:10:44,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:11:40] 2025-11-23 22:10:45,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:11:40] 2025-11-23 22:10:45,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:11:40] 2025-11-23 22:10:45,372 | INFO     | aborting loop
[2025-11-23 17:11:40] 2025-11-23 22:10:45,411 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:45,477 | INFO     | all data control threads have been joined
[2025-11-23 17:11:40] 2025-11-23 22:10:45,661 | INFO     | [payload] control thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:45,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:45,859 | INFO     | [job] control thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:46,084 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:46,103 | INFO     | [job] validate thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:46,118 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:46,151 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:46,309 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:46,378 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:46,414 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:46,483 | INFO     | [data] control thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:46,552 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:46,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:11:40] 2025-11-23 22:10:47,364 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:47,758 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:10:48,957 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:11:40] 2025-11-23 22:11:14,217 | INFO     | PID=1226654 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 17:11:40] 2025-11-23 22:11:14,218 | INFO     | .. there are 55 such processes running
[2025-11-23 17:11:40] 2025-11-23 22:11:14,218 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:11:40] 2025-11-23 22:11:14,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:11:40] 2025-11-23 22:11:14,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:11:40] 2025-11-23 22:11:34,791 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:11:40] 2025-11-23 22:11:35,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365031352128)>', '<ExcThread(monitor, started 140364522432256)>']
[2025-11-23 17:11:40] 2025-11-23 22:11:35,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:11:40] 2025-11-23 22:11:35,344 | INFO     | [monitor] control thread has ended
[2025-11-23 17:11:40] 2025-11-23 22:11:40,277 | INFO     | all workflow threads have been joined
[2025-11-23 17:11:40] 2025-11-23 22:11:40,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:11:40] 2025-11-23 22:11:40,279 | INFO     | traces error code: 0
[2025-11-23 17:11:40] 2025-11-23 22:11:40,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:11:40] 2025-11-23 22:11:40,382 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:11:40] 2025-11-23 22:11:40,386 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:11:40] 2025-11-23 22:11:40,401 [wrapper] pilotpid: 1226654
[2025-11-23 17:11:40] 2025-11-23 22:11:40,404 [wrapper] Pilot exit status: 0
[2025-11-23 17:11:40] 2025-11-23 22:11:40,479 [wrapper] pandaids: 6895335195
[2025-11-23 17:11:40] 2025-11-23 22:11:40,614 [wrapper] cleanup supervisor_pilot  316664 1226655
[2025-11-23 17:11:40] 2025-11-23 22:11:40,624 [wrapper] Test setup, not cleaning
[2025-11-23 17:11:40] 2025-11-23 22:11:40,629 [wrapper] apfmon messages muted
[2025-11-23 17:11:40] 2025-11-23 22:11:40,632 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:11:40] 2025-11-23 22:11:40,634 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:11:40]  *** Error codes and diagnostics ***
[2025-11-23 17:11:40]     "exeErrorCode": 0,
[2025-11-23 17:11:40]     "exeErrorDiag": "",
[2025-11-23 17:11:40]     "pilotErrorCode": 0,
[2025-11-23 17:11:40]     "pilotErrorDiag": "",
[2025-11-23 17:11:40]  *** Listing of results directory ***
[2025-11-23 17:11:40] total 1320968
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 23:34 pilot3.tar.gz
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 23:37 queuedata.json
[2025-11-23 17:11:40] -rwx------. 1 boincer umatlas     36292 Nov 21 23:40 runpilot2-wrapper.sh
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas       100 Nov 23 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:11:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 09:17 run_atlas
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas       105 Nov 23 09:17 job.xml
[2025-11-23 17:11:40] -rw-r--r--. 2 boincer umatlas 411104548 Nov 23 09:17 EVNT.47483658._000253.pool.root.1
[2025-11-23 17:11:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 09:17 start_atlas.sh
[2025-11-23 17:11:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 09:17 shared
[2025-11-23 17:11:40] -rw-r--r--. 2 boincer umatlas    590098 Nov 23 09:17 input.tar.gz
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas         0 Nov 23 09:17 boinc_lockfile
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 09:17 pandaJob.out
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas        57 Nov 23 09:17 setup.sh.local
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas    989785 Nov 23 09:18 agis_schedconf.cvmfs.json
[2025-11-23 17:11:40] drwx------. 5 boincer umatlas      4096 Nov 23 09:18 pilot3
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas       532 Nov 23 16:55 boinc_task_state.xml
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas      7174 Nov 23 17:01 init_data.xml
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas 926640892 Nov 23 17:09 HITS.47556137._002496.pool.root.1
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas      1076 Nov 23 17:10 memory_monitor_summary.json
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas   1526164 Nov 23 17:10 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas   1840132 Nov 23 17:10 log.47556137._002496.job.log.tgz.1
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas        95 Nov 23 17:10 pilot_heartbeat.json
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas      8639 Nov 23 17:10 heartbeat.json
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 17:11 boinc_mmap_file
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas        29 Nov 23 17:11 wrapper_checkpoint.txt
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas      4825 Nov 23 17:11 pilotlog.txt
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas   3655440 Nov 23 17:11 log.47556137._002496.job.log.1
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas       353 Nov 23 17:11 output.list
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas       620 Nov 23 17:11 runtime_log
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas   5519360 Nov 23 17:11 result.tar.gz
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas       663 Nov 23 17:11 YiNLDm9aug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmewJKDmXnXWwm.diag
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas      9338 Nov 23 17:11 runtime_log.err
[2025-11-23 17:11:40] -rw-r--r--. 1 boincer umatlas     21125 Nov 23 17:11 stderr.txt
[2025-11-23 17:11:40] HITS file was successfully produced:
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas 926640892 Nov 23 17:09 shared/HITS.pool.root.1
[2025-11-23 17:11:40]  *** Contents of shared directory: ***
[2025-11-23 17:11:40] total 1312392
[2025-11-23 17:11:40] -rw-r--r--. 2 boincer umatlas 411104548 Nov 23 09:17 ATLAS.root_0
[2025-11-23 17:11:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 09:17 start_atlas.sh
[2025-11-23 17:11:40] -rw-r--r--. 2 boincer umatlas    590098 Nov 23 09:17 input.tar.gz
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas 926640892 Nov 23 17:09 HITS.pool.root.1
[2025-11-23 17:11:40] -rw-------. 1 boincer umatlas   5519360 Nov 23 17:11 result.tar.gz
17:11:42 (1216512): run_atlas exited; CPU time 140916.235038
17:11:42 (1216512): called boinc_finish(0)

</stderr_txt>
]]>

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