Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
11:45:17 (1631416): wrapper (7.7.26015): starting
11:45:17 (1631416): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 11:45:17] Arguments: --nthreads 12
[2025-11-23 11:45:17] Threads: 12
[2025-11-23 11:45:17] Checking for CVMFS
[2025-11-23 11:45:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 11:45:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 11:45:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 11:45:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 11:45:17] 2.13.2.0 1426759 165 60224 153216 2 89 11855913 16777216 673 130560 0 275728 99.990 8066 1640 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-11-23 11:45:17] CVMFS is ok
[2025-11-23 11:45:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:45:17] Checking for apptainer binary...
[2025-11-23 11:45:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 11:45:17] Running /usr/bin/apptainer --version
[2025-11-23 11:45:17] apptainer version 1.3.0-bp160.1.36
[2025-11-23 11:45:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:45:17] boinc-runner
[2025-11-23 11:45:17] apptainer works
[2025-11-23 11:45:17] Set ATHENA_PROC_NUMBER=12
[2025-11-23 11:45:17] Set ATHENA_CORE_NUMBER=12
[2025-11-23 11:45:18] Starting ATLAS job with PandaID=6891567700
[2025-11-23 11:45:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 14:27:52]  *** The last 200 lines of the pilot log: ***
[2025-11-23 14:27:52] 2025-11-23 20:27:19,674 | INFO     | time since job start (9716s) is within the limit (172800.0s)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,768 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 14:27:52] 2025-11-23 20:27:20,770 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3520.4115625
[2025-11-23 14:27:52] 2025-11-23 20:27:20,772 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6891567700/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,773 | INFO     | extracted standard info from prmon json
[2025-11-23 14:27:52] 2025-11-23 20:27:20,773 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 14:27:52] 2025-11-23 20:27:20,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 14:27:52] 2025-11-23 20:27:20,774 | INFO     | fitting pss+swap vs Time
[2025-11-23 14:27:52] 2025-11-23 20:27:20,774 | INFO     | sum of square deviations: 1246386160.0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,774 | INFO     | sum of deviations: 72880947979.0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,774 | INFO     | mean x: 1763924758.0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,774 | INFO     | mean y: 3481444.396226415
[2025-11-23 14:27:52] 2025-11-23 20:27:20,774 | INFO     | intersect: -103139920377.9316
[2025-11-23 14:27:52] 2025-11-23 20:27:20,774 | INFO     | chi2: 2.480883699517026
[2025-11-23 14:27:52] 2025-11-23 20:27:20,774 | INFO     | sum of square deviations: 1132458442.5
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | sum of deviations: 91409362082.50003
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | mean x: 1763924605.5
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | mean y: 3505635.6948051946
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | intersect: -142376308845.1183
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | chi2: 1.6341415531735644
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | current chi2=1.6341415531735644 (change=34.130666685758136 %)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | sum of square deviations: 1025693650.0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | sum of deviations: 86556318257.00002
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | mean x: 1763924453.0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | mean y: 3498709.013422819
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | intersect: -148850699944.91473
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | chi2: 1.6313733002491473
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | current chi2=1.6313733002491473 (change=0.1694010484612559 %)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | right removable region: 148
[2025-11-23 14:27:52] 2025-11-23 20:27:20,775 | INFO     | sum of square deviations: 1132458442.5
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | sum of deviations: 34089094484.500004
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | mean x: 1763924910.5
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | mean y: 3532736.7337662335
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | intersect: -53093870824.36663
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | chi2: 0.8887359306457274
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | current chi2=0.8887359306457274 (change=64.17663871874588 %)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | sum of square deviations: 1025693650.0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | sum of deviations: 26114267140.000004
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | mean x: 1763925063.0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | mean y: 3544101.899328859
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | intersect: -44906171689.09083
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | chi2: 0.8748175567685758
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | current chi2=0.8748175567685758 (change=1.5660865502578496 %)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | left removable region: 20
[2025-11-23 14:27:52] 2025-11-23 20:27:20,776 | INFO     | sum of square deviations: 650252192.0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | sum of deviations: 30112685563.0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | mean x: 1763925032.5
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | mean y: 3586654.46875
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | intersect: -81682443033.49739
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | chi2: 0.004151539310102636
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | current memory leak: 46.31 B/s (using 128 data points, chi2=0.00)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | could have reported an average CPU frequency of 3887 MHz (9 samples)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | ..............................
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | . Timing measurements:
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | . get job = 0 s
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | . initial setup = 2 s
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | . payload setup = 2 s
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | . stage-in = 0 s
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | . payload execution = 9693 s
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | . stage-out = 0 s
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | . log creation = 0 s
[2025-11-23 14:27:52] 2025-11-23 20:27:20,777 | INFO     | ..............................
[2025-11-23 14:27:52] 2025-11-23 20:27:20,802 | INFO     | 
[2025-11-23 14:27:52] 2025-11-23 20:27:20,802 | INFO     | job summary report
[2025-11-23 14:27:52] 2025-11-23 20:27:20,802 | INFO     | --------------------------------------------------
[2025-11-23 14:27:52] 2025-11-23 20:27:20,802 | INFO     | PanDA job id: 6891567700
[2025-11-23 14:27:52] 2025-11-23 20:27:20,802 | INFO     | task id: 47493068
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | errors: (none)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | pilot state: finished 
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | transexitcode: 0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | exeerrorcode: 0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | exeerrordiag: 
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | exitcode: 0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | exitmsg: OK
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | cpuconsumptiontime: 113508 s
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | nevents: 1000
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | neventsw: 0
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | pid: 1642167
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | pgrp: 1642167
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | corecount: 12
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | event service: False
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | sizes: {0: 2298796, 2: 2299058, 11: 2299086, 9698: 2328675, 9699: 2337724, 9703: 2337724, 9706: 2338162}
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | --------------------------------------------------
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | 
[2025-11-23 14:27:52] 2025-11-23 20:27:20,803 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-23 14:27:52] 2025-11-23 20:27:20,811 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,811 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,811 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,811 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | job 6891567700 has completed (purged errors)
[2025-11-23 14:27:52] 2025-11-23 20:27:20,812 | INFO     | overall cleanup function is called
[2025-11-23 14:27:52] 2025-11-23 20:27:21,824 | INFO     | --- collectZombieJob: --- 10, [1642167]
[2025-11-23 14:27:52] 2025-11-23 20:27:21,824 | INFO     | zombie collector waiting for pid 1642167
[2025-11-23 14:27:52] 2025-11-23 20:27:21,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 14:27:52] 2025-11-23 20:27:21,824 | INFO     | collected zombie processes
[2025-11-23 14:27:52] 2025-11-23 20:27:21,824 | INFO     | will attempt to kill all subprocesses of pid=1642167
[2025-11-23 14:27:52] 2025-11-23 20:27:21,867 | INFO     | process IDs to be killed: [1642167] (in reverse order)
[2025-11-23 14:27:52] 2025-11-23 20:27:21,892 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 14:27:52] 2025-11-23 20:27:21,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 14:27:52] 2025-11-23 20:27:21,894 | INFO     | did not find any defunct processes belonging to 1642167
[2025-11-23 14:27:52] 2025-11-23 20:27:21,896 | INFO     | did not find any defunct processes belonging to 1642167
[2025-11-23 14:27:52] 2025-11-23 20:27:21,897 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 14:27:52] 2025-11-23 20:27:21,897 | INFO     | ready for new job
[2025-11-23 14:27:52] 2025-11-23 20:27:21,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 14:27:52] 2025-11-23 20:27:21,899 | INFO     | ***************************************
[2025-11-23 14:27:52] 2025-11-23 20:27:21,899 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 14:27:52] 2025-11-23 20:27:21,899 | INFO     | ***************************************
[2025-11-23 14:27:52] 2025-11-23 20:27:21,899 | INFO     | 
[2025-11-23 14:27:52] 2025-11-23 20:27:21,899 | INFO     | architecture information:
[2025-11-23 14:27:52] 2025-11-23 20:27:21,900 | INFO     | executing command: cat /etc/os-release
[2025-11-23 14:27:52] 2025-11-23 20:27:21,907 | INFO     | cat /etc/os-release:
[2025-11-23 14:27:52] NAME="CentOS Linux"
[2025-11-23 14:27:52] VERSION="7 (Core)"
[2025-11-23 14:27:52] ID="centos"
[2025-11-23 14:27:52] ID_LIKE="rhel fedora"
[2025-11-23 14:27:52] VERSION_ID="7"
[2025-11-23 14:27:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 14:27:52] ANSI_COLOR="0;31"
[2025-11-23 14:27:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 14:27:52] HOME_URL="https://www.centos.org/"
[2025-11-23 14:27:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 14:27:52] 
[2025-11-23 14:27:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 14:27:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 14:27:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 14:27:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 14:27:52] 
[2025-11-23 14:27:52] 2025-11-23 20:27:21,908 | INFO     | ***************************************
[2025-11-23 14:27:52] 2025-11-23 20:27:22,410 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-23 14:27:52] 2025-11-23 20:27:22,419 | INFO     | sufficient remaining disk space (3849509142528 B)
[2025-11-23 14:27:52] 2025-11-23 20:27:22,419 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 14:27:52] 2025-11-23 20:27:22,419 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 14:27:52] 2025-11-23 20:27:22,419 | INFO     | update_server=False
[2025-11-23 14:27:52] 2025-11-23 20:27:22,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 14:27:52] 2025-11-23 20:27:22,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 14:27:52] 2025-11-23 20:27:22,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:27:52] 2025-11-23 20:27:22,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:27:52] 2025-11-23 20:27:22,420 | INFO     | aborting loop
[2025-11-23 14:27:52] 2025-11-23 20:27:22,932 | INFO     | all data control threads have been joined
[2025-11-23 14:27:52] 2025-11-23 20:27:23,054 | INFO     | all job control threads have been joined
[2025-11-23 14:27:52] 2025-11-23 20:27:23,195 | INFO     | all payload control threads have been joined
[2025-11-23 14:27:52] 2025-11-23 20:27:23,424 | INFO     | [job] retrieve thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:23,425 | INFO     | [job] queue monitor thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:23,425 | INFO     | [job] job monitor thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:23,494 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:23,606 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:23,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 14:27:52] 2025-11-23 20:27:23,937 | INFO     | [data] control thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:24,059 | INFO     | [job] control thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:24,200 | INFO     | [payload] control thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:24,231 | INFO     | [payload] validate_post thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:24,376 | INFO     | [payload] failed_post thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:24,425 | INFO     | [data] copytool_out thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:24,825 | INFO     | [data] copytool_in thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:24,898 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:24,919 | INFO     | [job] validate thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:27,933 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:32,560 | INFO     | job.realtimelogging is not enabled
[2025-11-23 14:27:52] 2025-11-23 20:27:33,565 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 14:27:52] 2025-11-23 20:27:38,606 | INFO     | [monitor] cgroup control has ended
[2025-11-23 14:27:52] 2025-11-23 20:27:39,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875743037248)>', '<ExcThread(monitor, started 139875256882944)>']
[2025-11-23 14:27:52] 2025-11-23 20:27:44,188 | INFO     | all workflow threads have been joined
[2025-11-23 14:27:52] 2025-11-23 20:27:44,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 14:27:52] 2025-11-23 20:27:44,188 | INFO     | traces error code: 0
[2025-11-23 14:27:52] 2025-11-23 20:27:44,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 14:27:52] 2025-11-23 20:27:52,798 | INFO     | PID=1635304 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 14:27:52] 2025-11-23 20:27:52,798 | INFO     | .. there are 2 such processes running
[2025-11-23 14:27:52] 2025-11-23 20:27:52,798 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 14:27:52] 2025-11-23 20:27:52,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 14:27:52] 2025-11-23 20:27:52,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 14:27:52] 2025-11-23 20:27:52,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 14:27:52] 2025-11-23 20:27:52,798 | CRITICAL | thread 'MainThread' is not alive
[2025-11-23 14:27:52] 2025-11-23 20:27:52,798 | INFO     | [monitor] control thread has ended
[2025-11-23 14:27:52] 2025-11-23 20:27:52,840 [wrapper] ==== pilot stdout END ====
[2025-11-23 14:27:52] 2025-11-23 20:27:52,841 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 14:27:52] 2025-11-23 20:27:52,843 [wrapper] pilotpid: 1635304
[2025-11-23 14:27:52] 2025-11-23 20:27:52,843 [wrapper] Pilot exit status: 0
[2025-11-23 14:27:52] 2025-11-23 20:27:52,848 [wrapper] pandaids: 6891567700
[2025-11-23 14:27:52] 2025-11-23 20:27:52,862 [wrapper] cleanup supervisor_pilot 1780325 1635305
[2025-11-23 14:27:52] 2025-11-23 20:27:52,863 [wrapper] Test setup, not cleaning
[2025-11-23 14:27:52] 2025-11-23 20:27:52,864 [wrapper] apfmon messages muted
[2025-11-23 14:27:52] 2025-11-23 20:27:52,865 [wrapper] ==== wrapper stdout END ====
[2025-11-23 14:27:52] 2025-11-23 20:27:52,866 [wrapper] ==== wrapper stderr END ====
[2025-11-23 14:27:52]  *** Error codes and diagnostics ***
[2025-11-23 14:27:52]     "exeErrorCode": 0,
[2025-11-23 14:27:52]     "exeErrorDiag": "",
[2025-11-23 14:27:52]     "pilotErrorCode": 0,
[2025-11-23 14:27:52]     "pilotErrorDiag": "",
[2025-11-23 14:27:52]  *** Listing of results directory ***
[2025-11-23 14:27:52] total 1297212
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc    576529 Nov 18 09:15 pilot3.tar.gz
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc      5112 Nov 18 09:32 queuedata.json
[2025-11-23 14:27:52] -rwx------. 1 boinc boinc     36292 Nov 18 09:33 runpilot2-wrapper.sh
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc       100 Nov 23 11:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 14:27:52] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 11:45 run_atlas
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc       105 Nov 23 11:45 job.xml
[2025-11-23 14:27:52] -rw-r--r--. 2 boinc boinc 410063972 Nov 23 11:45 EVNT.47493065._000167.pool.root.1
[2025-11-23 14:27:52] -rw-r--r--. 2 boinc boinc     15120 Nov 23 11:45 start_atlas.sh
[2025-11-23 14:27:52] drwxrwx--x. 1 boinc boinc        76 Nov 23 11:45 shared
[2025-11-23 14:27:52] -rw-r--r--. 2 boinc boinc    590098 Nov 23 11:45 input.tar.gz
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc     10032 Nov 23 11:45 init_data.xml
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc         0 Nov 23 11:45 boinc_setup_complete
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc         0 Nov 23 11:45 boinc_lockfile
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc      2773 Nov 23 11:45 pandaJob.out
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc    989786 Nov 23 11:45 agis_schedconf.cvmfs.json
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc   1526164 Nov 23 11:45 agis_ddmendpoints.agis.ALL.json
[2025-11-23 14:27:52] drwx------. 1 boinc boinc       414 Nov 23 11:45 pilot3
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc       531 Nov 23 14:23 boinc_task_state.xml
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc 907659616 Nov 23 14:26 HITS.47493068._001669.pool.root.1
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc      1041 Nov 23 14:27 memory_monitor_summary.json
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc   1922351 Nov 23 14:27 log.47493068._001669.job.log.tgz.1
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc      8594 Nov 23 14:27 heartbeat.json
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc      8192 Nov 23 14:27 boinc_mmap_file
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc        28 Nov 23 14:27 wrapper_checkpoint.txt
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc       892 Nov 23 14:27 pilotlog.txt
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc        95 Nov 23 14:27 pilot_heartbeat.json
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc   1437601 Nov 23 14:27 log.47493068._001669.job.log.1
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc       353 Nov 23 14:27 output.list
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc       620 Nov 23 14:27 runtime_log
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc   3379200 Nov 23 14:27 result.tar.gz
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc       658 Nov 23 14:27 y7ZKDmXtcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiWFKDmRgYCKo.diag
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc      8727 Nov 23 14:27 runtime_log.err
[2025-11-23 14:27:52] -rw-r--r--. 1 boinc boinc     20859 Nov 23 14:27 stderr.txt
[2025-11-23 14:27:52] HITS file was successfully produced:
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc 907659616 Nov 23 14:26 shared/HITS.pool.root.1
[2025-11-23 14:27:52]  *** Contents of shared directory: ***
[2025-11-23 14:27:52] total 1290740
[2025-11-23 14:27:52] -rw-r--r--. 2 boinc boinc 410063972 Nov 23 11:45 ATLAS.root_0
[2025-11-23 14:27:52] -rw-r--r--. 2 boinc boinc     15120 Nov 23 11:45 start_atlas.sh
[2025-11-23 14:27:52] -rw-r--r--. 2 boinc boinc    590098 Nov 23 11:45 input.tar.gz
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc 907659616 Nov 23 14:26 HITS.pool.root.1
[2025-11-23 14:27:52] -rw-------. 1 boinc boinc   3379200 Nov 23 14:27 result.tar.gz
14:27:54 (1631416): run_atlas exited; CPU time 113409.444151
14:27:54 (1631416): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN