Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:41:07 (1962673): wrapper (7.7.26015): starting
00:41:07 (1962673): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 00:41:07] Arguments: --nthreads 3
[2025-11-26 00:41:07] Threads: 3
[2025-11-26 00:41:07] Checking for CVMFS
[2025-11-26 00:41:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:41:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:41:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:41:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:41:07] 2.9.2.0 528461 10427 91976 153302 1 81 34947688 36864000 0 130560 1 3877501 99.930 538709 840 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 00:41:07] CVMFS is ok
[2025-11-26 00:41:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:41:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:41:07] Further information can be found at the LHC@home message board.
[2025-11-26 00:41:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:41:07] Checking for apptainer binary...
[2025-11-26 00:41:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:41:07] Running /usr/bin/apptainer --version
[2025-11-26 00:41:07] apptainer version 1.4.1-1.1
[2025-11-26 00:41:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:41:07] magicA246a
[2025-11-26 00:41:07] apptainer works
[2025-11-26 00:41:07] Set ATHENA_PROC_NUMBER=3
[2025-11-26 00:41:07] Set ATHENA_CORE_NUMBER=3
[2025-11-26 00:41:07] Starting ATLAS job with PandaID=6895344016
[2025-11-26 00:41:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:33:55]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:33:55] 2025-11-26 07:33:36,400 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:33:55] 2025-11-26 07:33:36,400 | INFO     | ***************************************
[2025-11-26 08:33:55] 2025-11-26 07:33:36,400 | INFO     | 
[2025-11-26 08:33:55] 2025-11-26 07:33:36,400 | INFO     | architecture information:
[2025-11-26 08:33:55] 2025-11-26 07:33:36,400 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:33:55] 2025-11-26 07:33:36,409 | INFO     | cat /etc/os-release:
[2025-11-26 08:33:55] NAME="CentOS Linux"
[2025-11-26 08:33:55] VERSION="7 (Core)"
[2025-11-26 08:33:55] ID="centos"
[2025-11-26 08:33:55] ID_LIKE="rhel fedora"
[2025-11-26 08:33:55] VERSION_ID="7"
[2025-11-26 08:33:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:33:55] ANSI_COLOR="0;31"
[2025-11-26 08:33:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:33:55] HOME_URL="https://www.centos.org/"
[2025-11-26 08:33:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:33:55] 
[2025-11-26 08:33:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:33:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:33:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:33:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:33:55] 
[2025-11-26 08:33:55] 2025-11-26 07:33:36,409 | INFO     | ***************************************
[2025-11-26 08:33:55] 2025-11-26 07:33:36,912 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 08:33:55] 2025-11-26 07:33:36,925 | INFO     | sufficient remaining disk space (266683285504 B)
[2025-11-26 08:33:55] 2025-11-26 07:33:36,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:33:55] 2025-11-26 07:33:36,926 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:33:55] 2025-11-26 07:33:36,926 | INFO     | update_server=False
[2025-11-26 08:33:55] 2025-11-26 07:33:36,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:33:55] 2025-11-26 07:33:36,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:33:55] 2025-11-26 07:33:36,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:33:55] 2025-11-26 07:33:36,926 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 08:33:55] 2025-11-26 07:33:36,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:33:55] 2025-11-26 07:33:36,926 | INFO     | aborting loop
[2025-11-26 08:33:55] 2025-11-26 07:33:36,926 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:33:55] 2025-11-26 07:33:36,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:33:55] 2025-11-26 07:33:36,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:33:55] 2025-11-26 07:33:37,466 | INFO     | all job control threads have been joined
[2025-11-26 08:33:55] 2025-11-26 07:33:37,569 | INFO     | all data control threads have been joined
[2025-11-26 08:33:55] 2025-11-26 07:33:37,687 | INFO     | all payload control threads have been joined
[2025-11-26 08:33:55] 2025-11-26 07:33:37,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:33:55] 2025-11-26 07:33:37,931 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:37,931 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:37,932 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:38,105 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:38,365 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:38,472 | INFO     | [job] control thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:38,566 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:38,575 | INFO     | [data] control thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:38,581 | INFO     | [job] validate thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:38,587 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:38,692 | INFO     | [payload] control thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:38,925 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:38,932 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:39,449 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:41,703 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:46,880 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:33:55] 2025-11-26 07:33:47,982 | INFO     | job.realtimelogging is not enabled
[2025-11-26 08:33:55] 2025-11-26 07:33:48,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:33:55] 2025-11-26 07:33:50,815 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998097487680)>', '<ExcThread(monitor, started 139997470516992)>']
[2025-11-26 08:33:55] 2025-11-26 07:33:51,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:33:55] 2025-11-26 07:33:51,000 | INFO     | [monitor] control thread has ended
[2025-11-26 08:33:55] 2025-11-26 07:33:55,840 | INFO     | all workflow threads have been joined
[2025-11-26 08:33:55] 2025-11-26 07:33:55,841 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:33:55] 2025-11-26 07:33:55,841 | INFO     | traces error code: 0
[2025-11-26 08:33:55] 2025-11-26 07:33:55,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:33:55] 2025-11-26 07:33:55,893 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:33:55] 2025-11-26 07:33:55,896 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:33:55] 2025-11-26 07:33:55,898 [wrapper] pilotpid: 1966392
[2025-11-26 08:33:55] 2025-11-26 07:33:55,900 [wrapper] Pilot exit status: 0
[2025-11-26 08:33:55] 2025-11-26 07:33:55,907 [wrapper] pandaids: 6895344016
[2025-11-26 08:33:55] 2025-11-26 07:33:55,923 [wrapper] cleanup supervisor_pilot 2025078 1966393
[2025-11-26 08:33:55] 2025-11-26 07:33:55,926 [wrapper] Test setup, not cleaning
[2025-11-26 08:33:55] 2025-11-26 07:33:55,928 [wrapper] apfmon messages muted
[2025-11-26 08:33:55] 2025-11-26 07:33:55,930 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:33:55] 2025-11-26 07:33:55,933 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:33:55]  *** Error codes and diagnostics ***
[2025-11-26 08:33:55]     "exeErrorCode": 0,
[2025-11-26 08:33:55]     "exeErrorDiag": "",
[2025-11-26 08:33:55]     "pilotErrorCode": 0,
[2025-11-26 08:33:55]     "pilotErrorDiag": "",
[2025-11-26 08:33:55]  *** Listing of results directory ***
[2025-11-26 08:33:55] total 1301264
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc    576529 Nov 22 17:22 pilot3.tar.gz
[2025-11-26 08:33:55] -rwx------ 1 boinc boinc     36292 Nov 22 17:24 runpilot2-wrapper.sh
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc      5112 Nov 22 17:24 queuedata.json
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc       100 Nov 26 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:33:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 00:41 run_atlas
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc       105 Nov 26 00:41 job.xml
[2025-11-26 08:33:55] -rw-r--r-- 2 boinc boinc 408111344 Nov 26 00:41 EVNT.47483658._000429.pool.root.1
[2025-11-26 08:33:55] -rw-r--r-- 2 boinc boinc    590097 Nov 26 00:41 input.tar.gz
[2025-11-26 08:33:55] -rw-r--r-- 2 boinc boinc     15847 Nov 26 00:41 start_atlas.sh
[2025-11-26 08:33:55] drwxrwx--x 2 boinc boinc      4096 Nov 26 00:41 shared
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc         0 Nov 26 00:41 boinc_setup_complete
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc      6448 Nov 26 00:41 init_data.xml
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc         0 Nov 26 00:41 boinc_lockfile
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc      2784 Nov 26 00:41 pandaJob.out
[2025-11-26 08:33:55] -rw------- 1 boinc boinc    991877 Nov 26 00:41 agis_schedconf.cvmfs.json
[2025-11-26 08:33:55] drwx------ 5 boinc boinc      4096 Nov 26 00:41 pilot3
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc       531 Nov 26 08:29 boinc_task_state.xml
[2025-11-26 08:33:55] -rw------- 1 boinc boinc 910164157 Nov 26 08:33 HITS.47556137._004243.pool.root.1
[2025-11-26 08:33:55] -rw------- 1 boinc boinc      1023 Nov 26 08:33 memory_monitor_summary.json
[2025-11-26 08:33:55] -rw------- 1 boinc boinc   1516240 Nov 26 08:33 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:33:55] -rw------- 1 boinc boinc   1164340 Nov 26 08:33 log.47556137._004243.job.log.tgz.1
[2025-11-26 08:33:55] -rw------- 1 boinc boinc        95 Nov 26 08:33 pilot_heartbeat.json
[2025-11-26 08:33:55] -rw------- 1 boinc boinc      8565 Nov 26 08:33 heartbeat.json
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc      8192 Nov 26 08:33 boinc_mmap_file
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc        28 Nov 26 08:33 wrapper_checkpoint.txt
[2025-11-26 08:33:55] -rw------- 1 boinc boinc      4628 Nov 26 08:33 pilotlog.txt
[2025-11-26 08:33:55] -rw------- 1 boinc boinc   3990772 Nov 26 08:33 log.47556137._004243.job.log.1
[2025-11-26 08:33:55] -rw------- 1 boinc boinc       353 Nov 26 08:33 output.list
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc       620 Nov 26 08:33 runtime_log
[2025-11-26 08:33:55] -rw------- 1 boinc boinc   5171200 Nov 26 08:33 result.tar.gz
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc      8918 Nov 26 08:33 runtime_log.err
[2025-11-26 08:33:55] -rw------- 1 boinc boinc       669 Nov 26 08:33 iSGMDm8a5g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxBIKDmW7keam.diag
[2025-11-26 08:33:55] -rw-r--r-- 1 boinc boinc      9247 Nov 26 08:33 stderr.txt
[2025-11-26 08:33:55] HITS file was successfully produced:
[2025-11-26 08:33:55] -rw------- 1 boinc boinc 910164157 Nov 26 08:33 shared/HITS.pool.root.1
[2025-11-26 08:33:55]  *** Contents of shared directory: ***
[2025-11-26 08:33:55] total 1293040
[2025-11-26 08:33:55] -rw-r--r-- 2 boinc boinc 408111344 Nov 26 00:41 ATLAS.root_0
[2025-11-26 08:33:55] -rw-r--r-- 2 boinc boinc    590097 Nov 26 00:41 input.tar.gz
[2025-11-26 08:33:55] -rw-r--r-- 2 boinc boinc     15847 Nov 26 00:41 start_atlas.sh
[2025-11-26 08:33:55] -rw------- 1 boinc boinc 910164157 Nov 26 08:33 HITS.pool.root.1
[2025-11-26 08:33:55] -rw------- 1 boinc boinc   5171200 Nov 26 08:33 result.tar.gz
08:33:57 (1962673): run_atlas exited; CPU time 83551.388389
08:33:57 (1962673): called boinc_finish(0)

</stderr_txt>
]]>

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