Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:10:05 (5933): wrapper (7.7.26015): starting
09:10:05 (5933): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 09:10:05] Arguments: --nthreads 12
[2025-11-23 09:10:05] Threads: 12
[2025-11-23 09:10:05] Checking for CVMFS
[2025-11-23 09:10:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 09:10:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 09:10:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 09:10:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 09:10:06] 2.11.2.0 3165 69084 92984 153210 2 82 12405917 20275200 1 130560 0 28794922 99.929 3368819 35656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 09:10:06] CVMFS is ok
[2025-11-23 09:10:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 09:10:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 09:10:06] Further information can be found at the LHC@home message board.
[2025-11-23 09:10:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 09:10:06] Checking for apptainer binary...
[2025-11-23 09:10:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 09:10:06] Running /usr/bin/apptainer --version
[2025-11-23 09:10:06] apptainer version 1.3.2-1.el7
[2025-11-23 09:10:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 09:10:07] c-115-40.aglt2.org
[2025-11-23 09:10:07] apptainer works
[2025-11-23 09:10:07] Set ATHENA_PROC_NUMBER=12
[2025-11-23 09:10:07] Set ATHENA_CORE_NUMBER=12
[2025-11-23 09:10:07] Starting ATLAS job with PandaID=6895344053
[2025-11-23 09:10:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:36:05]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:36:05] 2025-11-23 20:35:44,165 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:36:05] 2025-11-23 20:35:44,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:36:05] 2025-11-23 20:35:44,172 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:36:05] 2025-11-23 20:35:44,173 | INFO     | sum of square deviations: 16880691235.614748
[2025-11-23 15:36:05] 2025-11-23 20:35:44,176 | INFO     | sum of deviations: 234446504380.23193
[2025-11-23 15:36:05] 2025-11-23 20:35:44,176 | INFO     | mean x: 1763918580.2638524
[2025-11-23 15:36:05] 2025-11-23 20:35:44,176 | INFO     | mean y: 4048920.7176781003
[2025-11-23 15:36:05] 2025-11-23 20:35:44,176 | INFO     | intersect: -24494032311.98142
[2025-11-23 15:36:05] 2025-11-23 20:35:44,176 | INFO     | chi2: 7.3915706584203225
[2025-11-23 15:36:05] 2025-11-23 20:35:44,177 | INFO     | sum of square deviations: 16221388442.762005
[2025-11-23 15:36:05] 2025-11-23 20:35:44,180 | INFO     | sum of deviations: 431164067651.08295
[2025-11-23 15:36:05] 2025-11-23 20:35:44,180 | INFO     | mean x: 1763918427.7673798
[2025-11-23 15:36:05] 2025-11-23 20:35:44,180 | INFO     | mean y: 4094389.564171123
[2025-11-23 15:36:05] 2025-11-23 20:35:44,180 | INFO     | intersect: -46880809883.857574
[2025-11-23 15:36:05] 2025-11-23 20:35:44,180 | INFO     | chi2: 3.4888658683730593
[2025-11-23 15:36:05] 2025-11-23 20:35:44,180 | INFO     | current chi2=3.4888658683730593 (change=52.79939772477699 %)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,181 | INFO     | sum of square deviations: 15579481324.899715
[2025-11-23 15:36:05] 2025-11-23 20:35:44,184 | INFO     | sum of deviations: 517061202113.4906
[2025-11-23 15:36:05] 2025-11-23 20:35:44,184 | INFO     | mean x: 1763918275.2710028
[2025-11-23 15:36:05] 2025-11-23 20:35:44,184 | INFO     | mean y: 4114726.485094851
[2025-11-23 15:36:05] 2025-11-23 20:35:44,184 | INFO     | intersect: -58537866538.571594
[2025-11-23 15:36:05] 2025-11-23 20:35:44,184 | INFO     | chi2: 2.5068065576915766
[2025-11-23 15:36:05] 2025-11-23 20:35:44,185 | INFO     | current chi2=2.5068065576915766 (change=28.14838253267215 %)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,185 | INFO     | sum of square deviations: 14954715054.074217
[2025-11-23 15:36:05] 2025-11-23 20:35:44,188 | INFO     | sum of deviations: 511711444745.7222
[2025-11-23 15:36:05] 2025-11-23 20:35:44,188 | INFO     | mean x: 1763918122.7719781
[2025-11-23 15:36:05] 2025-11-23 20:35:44,188 | INFO     | mean y: 4113399.8159340657
[2025-11-23 15:36:05] 2025-11-23 20:35:44,188 | INFO     | intersect: -60352575962.23947
[2025-11-23 15:36:05] 2025-11-23 20:35:44,188 | INFO     | chi2: 2.4738523314906464
[2025-11-23 15:36:05] 2025-11-23 20:35:44,188 | INFO     | current chi2=2.4738523314906464 (change=1.3145899151977822 %)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,189 | INFO     | right removable region: 363
[2025-11-23 15:36:05] 2025-11-23 20:35:44,189 | INFO     | sum of square deviations: 16221327442.762005
[2025-11-23 15:36:05] 2025-11-23 20:35:44,192 | INFO     | sum of deviations: 94568057169.3258
[2025-11-23 15:36:05] 2025-11-23 20:35:44,192 | INFO     | mean x: 1763918732.7673798
[2025-11-23 15:36:05] 2025-11-23 20:35:44,192 | INFO     | mean y: 4081140.026737968
[2025-11-23 15:36:05] 2025-11-23 20:35:44,192 | INFO     | intersect: -10279316945.055473
[2025-11-23 15:36:05] 2025-11-23 20:35:44,193 | INFO     | chi2: 5.1153691166968
[2025-11-23 15:36:05] 2025-11-23 20:35:44,193 | INFO     | current chi2=5.1153691166968 (change=30.794558381587294 %)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,193 | INFO     | sum of square deviations: 15579359324.899715
[2025-11-23 15:36:05] 2025-11-23 20:35:44,196 | INFO     | sum of deviations: 59363796509.97295
[2025-11-23 15:36:05] 2025-11-23 20:35:44,196 | INFO     | mean x: 1763918885.2710028
[2025-11-23 15:36:05] 2025-11-23 20:35:44,196 | INFO     | mean y: 4089494.100271003
[2025-11-23 15:36:05] 2025-11-23 20:35:44,196 | INFO     | intersect: -6717170320.34978
[2025-11-23 15:36:05] 2025-11-23 20:35:44,196 | INFO     | chi2: 5.046104099074152
[2025-11-23 15:36:05] 2025-11-23 20:35:44,197 | INFO     | current chi2=5.046104099074152 (change=1.354057078629257 %)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,197 | INFO     | left removable region: 20
[2025-11-23 15:36:05] 2025-11-23 20:35:44,197 | INFO     | sum of square deviations: 12512762807.56851
[2025-11-23 15:36:05] 2025-11-23 20:35:44,199 | INFO     | sum of deviations: 287814531670.32965
[2025-11-23 15:36:05] 2025-11-23 20:35:44,200 | INFO     | mean x: 1763918702.2827988
[2025-11-23 15:36:05] 2025-11-23 20:35:44,200 | INFO     | mean y: 4169547.6151603498
[2025-11-23 15:36:05] 2025-11-23 20:35:44,200 | INFO     | intersect: -40568919146.67237
[2025-11-23 15:36:05] 2025-11-23 20:35:44,200 | INFO     | chi2: 0.03305721187523963
[2025-11-23 15:36:05] 2025-11-23 20:35:44,200 | INFO     | current memory leak: 23.00 B/s (using 343 data points, chi2=0.03)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,201 | INFO     | could have reported an average CPU frequency of 2573 MHz (16 samples)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,201 | INFO     | ..............................
[2025-11-23 15:36:05] 2025-11-23 20:35:44,201 | INFO     | . Timing measurements:
[2025-11-23 15:36:05] 2025-11-23 20:35:44,201 | INFO     | . get job = 0 s
[2025-11-23 15:36:05] 2025-11-23 20:35:44,201 | INFO     | . initial setup = 2 s
[2025-11-23 15:36:05] 2025-11-23 20:35:44,201 | INFO     | . payload setup = 7 s
[2025-11-23 15:36:05] 2025-11-23 20:35:44,201 | INFO     | . stage-in = 0 s
[2025-11-23 15:36:05] 2025-11-23 20:35:44,202 | INFO     | . payload execution = 23083 s
[2025-11-23 15:36:05] 2025-11-23 20:35:44,202 | INFO     | . stage-out = 3 s
[2025-11-23 15:36:05] 2025-11-23 20:35:44,202 | INFO     | . log creation = 0 s
[2025-11-23 15:36:05] 2025-11-23 20:35:44,202 | INFO     | ..............................
[2025-11-23 15:36:05] 2025-11-23 20:35:44,252 | INFO     | time since job start (23122s) is within the limit (172800.0s)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,279 | INFO     | 
[2025-11-23 15:36:05] 2025-11-23 20:35:44,279 | INFO     | job summary report
[2025-11-23 15:36:05] 2025-11-23 20:35:44,279 | INFO     | --------------------------------------------------
[2025-11-23 15:36:05] 2025-11-23 20:35:44,279 | INFO     | PanDA job id: 6895344053
[2025-11-23 15:36:05] 2025-11-23 20:35:44,279 | INFO     | task id: 47556137
[2025-11-23 15:36:05] 2025-11-23 20:35:44,279 | INFO     | errors: (none)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,280 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:36:05] 2025-11-23 20:35:44,280 | INFO     | pilot state: finished 
[2025-11-23 15:36:05] 2025-11-23 20:35:44,280 | INFO     | transexitcode: 0
[2025-11-23 15:36:05] 2025-11-23 20:35:44,280 | INFO     | exeerrorcode: 0
[2025-11-23 15:36:05] 2025-11-23 20:35:44,280 | INFO     | exeerrordiag: 
[2025-11-23 15:36:05] 2025-11-23 20:35:44,280 | INFO     | exitcode: 0
[2025-11-23 15:36:05] 2025-11-23 20:35:44,281 | INFO     | exitmsg: OK
[2025-11-23 15:36:05] 2025-11-23 20:35:44,281 | INFO     | cpuconsumptiontime: 265759 s
[2025-11-23 15:36:05] 2025-11-23 20:35:44,281 | INFO     | nevents: 1000
[2025-11-23 15:36:05] 2025-11-23 20:35:44,281 | INFO     | neventsw: 0
[2025-11-23 15:36:05] 2025-11-23 20:35:44,281 | INFO     | pid: 15979
[2025-11-23 15:36:05] 2025-11-23 20:35:44,281 | INFO     | pgrp: 15979
[2025-11-23 15:36:05] 2025-11-23 20:35:44,282 | INFO     | corecount: 12
[2025-11-23 15:36:05] 2025-11-23 20:35:44,282 | INFO     | event service: False
[2025-11-23 15:36:05] 2025-11-23 20:35:44,282 | INFO     | sizes: {0: 2298705, 5: 2298967, 11: 2299023, 23094: 2334844, 23097: 2343838, 23100: 2343894, 23106: 2344268}
[2025-11-23 15:36:05] 2025-11-23 20:35:44,282 | INFO     | --------------------------------------------------
[2025-11-23 15:36:05] 2025-11-23 20:35:44,282 | INFO     | 
[2025-11-23 15:36:05] 2025-11-23 20:35:44,282 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 15:36:05] 2025-11-23 20:35:44,307 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,307 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,307 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,307 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:36:05] 2025-11-23 20:35:44,310 | INFO     | job 6895344053 has completed (purged errors)
[2025-11-23 15:36:05] 2025-11-23 20:35:44,311 | INFO     | overall cleanup function is called
[2025-11-23 15:36:05] 2025-11-23 20:35:45,326 | INFO     | --- collectZombieJob: --- 10, [15979]
[2025-11-23 15:36:05] 2025-11-23 20:35:45,327 | INFO     | zombie collector waiting for pid 15979
[2025-11-23 15:36:05] 2025-11-23 20:35:45,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:36:05] 2025-11-23 20:35:45,327 | INFO     | collected zombie processes
[2025-11-23 15:36:05] 2025-11-23 20:35:45,327 | INFO     | will attempt to kill all subprocesses of pid=15979
[2025-11-23 15:36:05] 2025-11-23 20:35:45,414 | INFO     | process IDs to be killed: [15979] (in reverse order)
[2025-11-23 15:36:05] 2025-11-23 20:35:45,468 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:36:05] 2025-11-23 20:35:45,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:36:05] 2025-11-23 20:35:45,473 | INFO     | did not find any defunct processes belonging to 15979
[2025-11-23 15:36:05] 2025-11-23 20:35:45,475 | INFO     | did not find any defunct processes belonging to 15979
[2025-11-23 15:36:05] 2025-11-23 20:35:45,477 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:36:05] 2025-11-23 20:35:45,477 | INFO     | ready for new job
[2025-11-23 15:36:05] 2025-11-23 20:35:45,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:36:05] 2025-11-23 20:35:45,479 | INFO     | ***************************************
[2025-11-23 15:36:05] 2025-11-23 20:35:45,479 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:36:05] 2025-11-23 20:35:45,480 | INFO     | ***************************************
[2025-11-23 15:36:05] 2025-11-23 20:35:45,480 | INFO     | 
[2025-11-23 15:36:05] 2025-11-23 20:35:45,480 | INFO     | architecture information:
[2025-11-23 15:36:05] 2025-11-23 20:35:45,481 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:36:05] 2025-11-23 20:35:45,496 | INFO     | cat /etc/os-release:
[2025-11-23 15:36:05] NAME="CentOS Linux"
[2025-11-23 15:36:05] VERSION="7 (Core)"
[2025-11-23 15:36:05] ID="centos"
[2025-11-23 15:36:05] ID_LIKE="rhel fedora"
[2025-11-23 15:36:05] VERSION_ID="7"
[2025-11-23 15:36:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:36:05] ANSI_COLOR="0;31"
[2025-11-23 15:36:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:36:05] HOME_URL="https://www.centos.org/"
[2025-11-23 15:36:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:36:05] 
[2025-11-23 15:36:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:36:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:36:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:36:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:36:05] 
[2025-11-23 15:36:05] 2025-11-23 20:35:45,497 | INFO     | ***************************************
[2025-11-23 15:36:05] 2025-11-23 20:35:46,000 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 15:36:05] 2025-11-23 20:35:46,017 | INFO     | sufficient remaining disk space (17588813824 B)
[2025-11-23 15:36:05] 2025-11-23 20:35:46,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:36:05] 2025-11-23 20:35:46,017 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:36:05] 2025-11-23 20:35:46,018 | INFO     | update_server=False
[2025-11-23 15:36:05] 2025-11-23 20:35:46,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:36:05] 2025-11-23 20:35:46,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:36:05] 2025-11-23 20:35:46,018 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 15:36:05] 2025-11-23 20:35:46,019 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:36:05] 2025-11-23 20:35:46,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:36:05] 2025-11-23 20:35:46,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:36:05] 2025-11-23 20:35:46,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:36:05] 2025-11-23 20:35:46,225 | INFO     | aborting loop
[2025-11-23 15:36:05] 2025-11-23 20:35:46,451 | INFO     | all payload control threads have been joined
[2025-11-23 15:36:05] 2025-11-23 20:35:46,474 | INFO     | all data control threads have been joined
[2025-11-23 15:36:05] 2025-11-23 20:35:46,563 | INFO     | all job control threads have been joined
[2025-11-23 15:36:05] 2025-11-23 20:35:46,625 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:36:05] 2025-11-23 20:35:47,019 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,023 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,161 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,192 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,230 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,254 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,457 | INFO     | [payload] control thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,480 | INFO     | [data] control thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,568 | INFO     | [job] control thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,872 | INFO     | [job] validate thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:47,961 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:48,263 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:48,488 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:48,626 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:49,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:36:05] 2025-11-23 20:35:53,102 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:36:05] 2025-11-23 20:35:59,737 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:36:05] 2025-11-23 20:35:59,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139841186539328)>', '<ExcThread(monitor, started 139840737748736)>']
[2025-11-23 15:36:05] 2025-11-23 20:36:00,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:36:05] 2025-11-23 20:36:00,087 | INFO     | [monitor] control thread has ended
[2025-11-23 15:36:05] 2025-11-23 20:36:04,915 | INFO     | all workflow threads have been joined
[2025-11-23 15:36:05] 2025-11-23 20:36:04,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:36:05] 2025-11-23 20:36:04,916 | INFO     | traces error code: 0
[2025-11-23 15:36:05] 2025-11-23 20:36:04,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:36:05] 2025-11-23 20:36:04,998 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:36:05] 2025-11-23 20:36:05,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:36:05] 2025-11-23 20:36:05,006 [wrapper] pilotpid: 9610
[2025-11-23 15:36:05] 2025-11-23 20:36:05,009 [wrapper] Pilot exit status: 0
[2025-11-23 15:36:05] 2025-11-23 20:36:05,023 [wrapper] pandaids: 6895344053
[2025-11-23 15:36:05] 2025-11-23 20:36:05,061 [wrapper] cleanup supervisor_pilot 26707 9611
[2025-11-23 15:36:05] 2025-11-23 20:36:05,065 [wrapper] Test setup, not cleaning
[2025-11-23 15:36:05] 2025-11-23 20:36:05,068 [wrapper] apfmon messages muted
[2025-11-23 15:36:05] 2025-11-23 20:36:05,071 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:36:05] 2025-11-23 20:36:05,075 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:36:05]  *** Error codes and diagnostics ***
[2025-11-23 15:36:05]     "exeErrorCode": 0,
[2025-11-23 15:36:05]     "exeErrorDiag": "",
[2025-11-23 15:36:05]     "pilotErrorCode": 0,
[2025-11-23 15:36:05]     "pilotErrorDiag": "",
[2025-11-23 15:36:05]  *** Listing of results directory ***
[2025-11-23 15:36:05] total 1314128
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 11:22 pilot3.tar.gz
[2025-11-23 15:36:05] -rwx------ 1 boincer umatlas     36292 Nov 22 11:32 runpilot2-wrapper.sh
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 11:32 queuedata.json
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas       100 Nov 23 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:36:05] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 09:10 run_atlas
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas       105 Nov 23 09:10 job.xml
[2025-11-23 15:36:05] -rw-r--r-- 2 boincer umatlas 409889727 Nov 23 09:10 EVNT.47483658._000432.pool.root.1
[2025-11-23 15:36:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 09:10 start_atlas.sh
[2025-11-23 15:36:05] drwxrwx--x 2 boincer umatlas      4096 Nov 23 09:10 shared
[2025-11-23 15:36:05] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 09:10 input.tar.gz
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas         0 Nov 23 09:10 boinc_lockfile
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 09:10 pandaJob.out
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas        57 Nov 23 09:10 setup.sh.local
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas    989785 Nov 23 09:10 agis_schedconf.cvmfs.json
[2025-11-23 15:36:05] drwx------ 5 boincer umatlas      4096 Nov 23 09:10 pilot3
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas       533 Nov 23 15:24 boinc_task_state.xml
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas      5957 Nov 23 15:29 init_data.xml
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas 921086524 Nov 23 15:35 HITS.47556137._004280.pool.root.1
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas        95 Nov 23 15:35 pilot_heartbeat.json
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas      1065 Nov 23 15:35 memory_monitor_summary.json
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas   1526164 Nov 23 15:35 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas   2140824 Nov 23 15:35 log.47556137._004280.job.log.tgz.1
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas      8665 Nov 23 15:35 heartbeat.json
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 15:35 boinc_mmap_file
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas        29 Nov 23 15:35 wrapper_checkpoint.txt
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas      4552 Nov 23 15:36 pilotlog.txt
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas   3242401 Nov 23 15:36 log.47556137._004280.job.log.1
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas       353 Nov 23 15:36 output.list
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas       620 Nov 23 15:36 runtime_log
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas   5406720 Nov 23 15:36 result.tar.gz
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 15:36 runtime_log.err
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas       669 Nov 23 15:36 NinLDmmi5g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7BIKDmE3omkn.diag
[2025-11-23 15:36:05] -rw-r--r-- 1 boincer umatlas     21032 Nov 23 15:36 stderr.txt
[2025-11-23 15:36:05] HITS file was successfully produced:
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas 921086524 Nov 23 15:35 shared/HITS.pool.root.1
[2025-11-23 15:36:05]  *** Contents of shared directory: ***
[2025-11-23 15:36:05] total 1305664
[2025-11-23 15:36:05] -rw-r--r-- 2 boincer umatlas 409889727 Nov 23 09:10 ATLAS.root_0
[2025-11-23 15:36:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 09:10 start_atlas.sh
[2025-11-23 15:36:05] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 09:10 input.tar.gz
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas 921086524 Nov 23 15:35 HITS.pool.root.1
[2025-11-23 15:36:05] -rw------- 1 boincer umatlas   5406720 Nov 23 15:36 result.tar.gz
15:36:06 (5933): run_atlas exited; CPU time 262706.144867
15:36:06 (5933): called boinc_finish(0)

</stderr_txt>
]]>

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