Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:58:11 (6516): wrapper (7.7.26015): starting
08:58:11 (6516): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 08:58:11] Arguments: --nthreads 12
[2025-11-23 08:58:11] Threads: 12
[2025-11-23 08:58:11] Checking for CVMFS
[2025-11-23 08:58:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:58:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:58:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:58:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:58:12] 2.11.2.0 3009 68718 95392 153210 0 82 11882180 20275200 1 130560 0 28109098 99.909 3655316 34282 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 08:58:12] CVMFS is ok
[2025-11-23 08:58:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:58:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:58:12] Further information can be found at the LHC@home message board.
[2025-11-23 08:58:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:58:12] Checking for apptainer binary...
[2025-11-23 08:58:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:58:12] Running /usr/bin/apptainer --version
[2025-11-23 08:58:12] apptainer version 1.3.2-1.el7
[2025-11-23 08:58:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:58:13] c-115-42.aglt2.org
[2025-11-23 08:58:13] apptainer works
[2025-11-23 08:58:13] Set ATHENA_PROC_NUMBER=12
[2025-11-23 08:58:13] Set ATHENA_CORE_NUMBER=12
[2025-11-23 08:58:13] Starting ATLAS job with PandaID=6895344144
[2025-11-23 08:58:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:21:10]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:21:10] 2025-11-23 20:20:25,493 | INFO     | time since job start (22917s) is within the limit (172800.0s)
[2025-11-23 15:21:10] 2025-11-23 20:20:26,495 | INFO     | monitor loop #1714: job 0:6895344144 is in state 'finished'
[2025-11-23 15:21:10] 2025-11-23 20:20:26,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 15:21:10] 2025-11-23 20:20:27,496 | INFO     | time since job start (22919s) is within the limit (172800.0s)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,771 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 15:21:10] 2025-11-23 20:20:28,776 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-11-23 15:21:10] 2025-11-23 20:20:28,777 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895344144/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,778 | INFO     | extracted standard info from prmon json
[2025-11-23 15:21:10] 2025-11-23 20:20:28,778 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:21:10] 2025-11-23 20:20:28,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:21:10] 2025-11-23 20:20:28,784 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:21:10] 2025-11-23 20:20:28,785 | INFO     | sum of square deviations: 16482883085.976034
[2025-11-23 15:21:10] 2025-11-23 20:20:28,787 | INFO     | sum of deviations: 258165076922.787
[2025-11-23 15:21:10] 2025-11-23 20:20:28,787 | INFO     | mean x: 1763917773.7420213
[2025-11-23 15:21:10] 2025-11-23 20:20:28,788 | INFO     | mean y: 4060249.595744681
[2025-11-23 15:21:10] 2025-11-23 20:20:28,788 | INFO     | intersect: -27623507413.674778
[2025-11-23 15:21:10] 2025-11-23 20:20:28,788 | INFO     | chi2: 6.44614630177083
[2025-11-23 15:21:10] 2025-11-23 20:20:28,789 | INFO     | sum of square deviations: 15834042860.679146
[2025-11-23 15:21:10] 2025-11-23 20:20:28,791 | INFO     | sum of deviations: 446370354933.1509
[2025-11-23 15:21:10] 2025-11-23 20:20:28,791 | INFO     | mean x: 1763917621.2452831
[2025-11-23 15:21:10] 2025-11-23 20:20:28,792 | INFO     | mean y: 4104447.514824798
[2025-11-23 15:21:10] 2025-11-23 20:20:28,792 | INFO     | intersect: -49721700995.6015
[2025-11-23 15:21:10] 2025-11-23 20:20:28,792 | INFO     | chi2: 2.8744650130353744
[2025-11-23 15:21:10] 2025-11-23 20:20:28,792 | INFO     | current chi2=2.8744650130353744 (change=55.408008467854266 %)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,793 | INFO     | sum of square deviations: 15202458772.874289
[2025-11-23 15:21:10] 2025-11-23 20:20:28,795 | INFO     | sum of deviations: 487742846786.66113
[2025-11-23 15:21:10] 2025-11-23 20:20:28,795 | INFO     | mean x: 1763917468.7486339
[2025-11-23 15:21:10] 2025-11-23 20:20:28,796 | INFO     | mean y: 4114339.3224043716
[2025-11-23 15:21:10] 2025-11-23 20:20:28,796 | INFO     | intersect: -56587923866.976135
[2025-11-23 15:21:10] 2025-11-23 20:20:28,796 | INFO     | chi2: 2.358118498322616
[2025-11-23 15:21:10] 2025-11-23 20:20:28,796 | INFO     | current chi2=2.358118498322616 (change=17.963221412373606 %)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,796 | INFO     | right removable region: 365
[2025-11-23 15:21:10] 2025-11-23 20:20:28,797 | INFO     | sum of square deviations: 15833987350.679146
[2025-11-23 15:21:10] 2025-11-23 20:20:28,800 | INFO     | sum of deviations: 120766450597.22644
[2025-11-23 15:21:10] 2025-11-23 20:20:28,800 | INFO     | mean x: 1763917926.2452831
[2025-11-23 15:21:10] 2025-11-23 20:20:28,800 | INFO     | mean y: 4092407.4150943398
[2025-11-23 15:21:10] 2025-11-23 20:20:28,800 | INFO     | intersect: -13449379695.32258
[2025-11-23 15:21:10] 2025-11-23 20:20:28,800 | INFO     | chi2: 4.2303325582388185
[2025-11-23 15:21:10] 2025-11-23 20:20:28,800 | INFO     | current chi2=4.2303325582388185 (change=34.374239115908715 %)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,801 | INFO     | sum of square deviations: 15202370139.368784
[2025-11-23 15:21:10] 2025-11-23 20:20:28,804 | INFO     | sum of deviations: 95016582035.99191
[2025-11-23 15:21:10] 2025-11-23 20:20:28,804 | INFO     | mean x: 1763918078.7459016
[2025-11-23 15:21:10] 2025-11-23 20:20:28,804 | INFO     | mean y: 4098612.4945355193
[2025-11-23 15:21:10] 2025-11-23 20:20:28,804 | INFO     | intersect: -11020594596.35587
[2025-11-23 15:21:10] 2025-11-23 20:20:28,804 | INFO     | chi2: 4.200334243659602
[2025-11-23 15:21:10] 2025-11-23 20:20:28,804 | INFO     | current chi2=4.200334243659602 (change=0.709124263074623 %)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,804 | INFO     | left removable region: 20
[2025-11-23 15:21:10] 2025-11-23 20:20:28,805 | INFO     | sum of square deviations: 12732860074.057993
[2025-11-23 15:21:10] 2025-11-23 20:20:28,807 | INFO     | sum of deviations: 283184223314.71
[2025-11-23 15:21:10] 2025-11-23 20:20:28,807 | INFO     | mean x: 1763918048.2463768
[2025-11-23 15:21:10] 2025-11-23 20:20:28,808 | INFO     | mean y: 4164866.768115942
[2025-11-23 15:21:10] 2025-11-23 20:20:28,808 | INFO     | intersect: -39226122718.12115
[2025-11-23 15:21:10] 2025-11-23 20:20:28,808 | INFO     | chi2: 0.035528136442124145
[2025-11-23 15:21:10] 2025-11-23 20:20:28,808 | INFO     | current memory leak: 22.24 B/s (using 345 data points, chi2=0.04)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,808 | INFO     | could have reported an average CPU frequency of 2565 MHz (16 samples)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,809 | INFO     | ..............................
[2025-11-23 15:21:10] 2025-11-23 20:20:28,809 | INFO     | . Timing measurements:
[2025-11-23 15:21:10] 2025-11-23 20:20:28,809 | INFO     | . get job = 0 s
[2025-11-23 15:21:10] 2025-11-23 20:20:28,809 | INFO     | . initial setup = 2 s
[2025-11-23 15:21:10] 2025-11-23 20:20:28,809 | INFO     | . payload setup = 7 s
[2025-11-23 15:21:10] 2025-11-23 20:20:28,809 | INFO     | . stage-in = 0 s
[2025-11-23 15:21:10] 2025-11-23 20:20:28,809 | INFO     | . payload execution = 22880 s
[2025-11-23 15:21:10] 2025-11-23 20:20:28,809 | INFO     | . stage-out = 3 s
[2025-11-23 15:21:10] 2025-11-23 20:20:28,809 | INFO     | . log creation = 0 s
[2025-11-23 15:21:10] 2025-11-23 20:20:28,810 | INFO     | ..............................
[2025-11-23 15:21:10] 2025-11-23 20:20:28,885 | INFO     | 
[2025-11-23 15:21:10] 2025-11-23 20:20:28,885 | INFO     | job summary report
[2025-11-23 15:21:10] 2025-11-23 20:20:28,886 | INFO     | --------------------------------------------------
[2025-11-23 15:21:10] 2025-11-23 20:20:28,886 | INFO     | PanDA job id: 6895344144
[2025-11-23 15:21:10] 2025-11-23 20:20:28,886 | INFO     | task id: 47556137
[2025-11-23 15:21:10] 2025-11-23 20:20:28,886 | INFO     | errors: (none)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:21:10] 2025-11-23 20:20:28,886 | INFO     | pilot state: finished 
[2025-11-23 15:21:10] 2025-11-23 20:20:28,886 | INFO     | transexitcode: 0
[2025-11-23 15:21:10] 2025-11-23 20:20:28,887 | INFO     | exeerrorcode: 0
[2025-11-23 15:21:10] 2025-11-23 20:20:28,887 | INFO     | exeerrordiag: 
[2025-11-23 15:21:10] 2025-11-23 20:20:28,887 | INFO     | exitcode: 0
[2025-11-23 15:21:10] 2025-11-23 20:20:28,887 | INFO     | exitmsg: OK
[2025-11-23 15:21:10] 2025-11-23 20:20:28,887 | INFO     | cpuconsumptiontime: 264279 s
[2025-11-23 15:21:10] 2025-11-23 20:20:28,887 | INFO     | nevents: 1000
[2025-11-23 15:21:10] 2025-11-23 20:20:28,888 | INFO     | neventsw: 0
[2025-11-23 15:21:10] 2025-11-23 20:20:28,888 | INFO     | pid: 16634
[2025-11-23 15:21:10] 2025-11-23 20:20:28,888 | INFO     | pgrp: 16634
[2025-11-23 15:21:10] 2025-11-23 20:20:28,888 | INFO     | corecount: 12
[2025-11-23 15:21:10] 2025-11-23 20:20:28,888 | INFO     | event service: False
[2025-11-23 15:21:10] 2025-11-23 20:20:28,888 | INFO     | sizes: {0: 2297927, 1: 2298783, 6: 2299045, 12: 2299073, 22892: 2334838, 22895: 2343832, 22898: 2344016, 22905: 2344262}
[2025-11-23 15:21:10] 2025-11-23 20:20:28,888 | INFO     | --------------------------------------------------
[2025-11-23 15:21:10] 2025-11-23 20:20:28,889 | INFO     | 
[2025-11-23 15:21:10] 2025-11-23 20:20:28,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 15:21:10] 2025-11-23 20:20:28,914 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,914 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,914 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,914 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,917 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,917 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:21:10] 2025-11-23 20:20:28,917 | INFO     | job 6895344144 has completed (purged errors)
[2025-11-23 15:21:10] 2025-11-23 20:20:28,917 | INFO     | overall cleanup function is called
[2025-11-23 15:21:10] 2025-11-23 20:20:29,934 | INFO     | --- collectZombieJob: --- 10, [16634]
[2025-11-23 15:21:10] 2025-11-23 20:20:29,934 | INFO     | zombie collector waiting for pid 16634
[2025-11-23 15:21:10] 2025-11-23 20:20:29,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:21:10] 2025-11-23 20:20:29,934 | INFO     | collected zombie processes
[2025-11-23 15:21:10] 2025-11-23 20:20:29,934 | INFO     | will attempt to kill all subprocesses of pid=16634
[2025-11-23 15:21:10] 2025-11-23 20:20:30,021 | INFO     | process IDs to be killed: [16634] (in reverse order)
[2025-11-23 15:21:10] 2025-11-23 20:20:30,073 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:21:10] 2025-11-23 20:20:30,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:21:10] 2025-11-23 20:20:30,077 | INFO     | did not find any defunct processes belonging to 16634
[2025-11-23 15:21:10] 2025-11-23 20:20:30,080 | INFO     | did not find any defunct processes belonging to 16634
[2025-11-23 15:21:10] 2025-11-23 20:20:30,082 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:21:10] 2025-11-23 20:20:30,083 | INFO     | ready for new job
[2025-11-23 15:21:10] 2025-11-23 20:20:30,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:21:10] 2025-11-23 20:20:30,085 | INFO     | ***************************************
[2025-11-23 15:21:10] 2025-11-23 20:20:30,085 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:21:10] 2025-11-23 20:20:30,085 | INFO     | ***************************************
[2025-11-23 15:21:10] 2025-11-23 20:20:30,086 | INFO     | 
[2025-11-23 15:21:10] 2025-11-23 20:20:30,086 | INFO     | architecture information:
[2025-11-23 15:21:10] 2025-11-23 20:20:30,087 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:21:10] 2025-11-23 20:20:30,105 | INFO     | cat /etc/os-release:
[2025-11-23 15:21:10] NAME="CentOS Linux"
[2025-11-23 15:21:10] VERSION="7 (Core)"
[2025-11-23 15:21:10] ID="centos"
[2025-11-23 15:21:10] ID_LIKE="rhel fedora"
[2025-11-23 15:21:10] VERSION_ID="7"
[2025-11-23 15:21:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:21:10] ANSI_COLOR="0;31"
[2025-11-23 15:21:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:21:10] HOME_URL="https://www.centos.org/"
[2025-11-23 15:21:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:21:10] 
[2025-11-23 15:21:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:21:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:21:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:21:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:21:10] 
[2025-11-23 15:21:10] 2025-11-23 20:20:30,105 | INFO     | ***************************************
[2025-11-23 15:21:10] 2025-11-23 20:20:30,608 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 15:21:10] 2025-11-23 20:20:30,627 | INFO     | sufficient remaining disk space (17480810496 B)
[2025-11-23 15:21:10] 2025-11-23 20:20:30,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:21:10] 2025-11-23 20:20:30,627 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:21:10] 2025-11-23 20:20:30,628 | INFO     | update_server=False
[2025-11-23 15:21:10] 2025-11-23 20:20:30,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:21:10] 2025-11-23 20:20:30,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:21:10] 2025-11-23 20:20:30,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:21:10] 2025-11-23 20:20:30,629 | INFO     | aborting loop
[2025-11-23 15:21:10] 2025-11-23 20:20:30,982 | INFO     | all data control threads have been joined
[2025-11-23 15:21:10] 2025-11-23 20:20:31,137 | INFO     | all job control threads have been joined
[2025-11-23 15:21:10] 2025-11-23 20:20:31,407 | INFO     | all payload control threads have been joined
[2025-11-23 15:21:10] 2025-11-23 20:20:31,633 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:31,634 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:31,635 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:31,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:31,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:21:10] 2025-11-23 20:20:31,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:21:10] 2025-11-23 20:20:31,988 | INFO     | [data] control thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:32,140 | INFO     | [job] control thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:32,370 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:32,373 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:32,414 | INFO     | [payload] control thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:32,717 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:32,752 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:32,764 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:33,022 | INFO     | [job] validate thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:33,023 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:33,671 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:20:35,694 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:21:10] 2025-11-23 20:21:00,692 | INFO     | PID=10245 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 15:21:10] 2025-11-23 20:21:00,692 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:21:10] 2025-11-23 20:21:00,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:21:10] 2025-11-23 20:21:00,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:21:10] 2025-11-23 20:21:04,744 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:21:10] 2025-11-23 20:21:05,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916214134592)>', '<ExcThread(monitor, started 139915765458688)>']
[2025-11-23 15:21:10] 2025-11-23 20:21:05,718 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:21:10] 2025-11-23 20:21:05,718 | INFO     | [monitor] control thread has ended
[2025-11-23 15:21:10] 2025-11-23 20:21:10,078 | INFO     | all workflow threads have been joined
[2025-11-23 15:21:10] 2025-11-23 20:21:10,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:21:10] 2025-11-23 20:21:10,079 | INFO     | traces error code: 0
[2025-11-23 15:21:10] 2025-11-23 20:21:10,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:21:10] 2025-11-23 20:21:10,181 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:21:10] 2025-11-23 20:21:10,185 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:21:10] 2025-11-23 20:21:10,188 [wrapper] pilotpid: 10245
[2025-11-23 15:21:10] 2025-11-23 20:21:10,192 [wrapper] Pilot exit status: 0
[2025-11-23 15:21:10] 2025-11-23 20:21:10,206 [wrapper] pandaids: 6895344144
[2025-11-23 15:21:10] 2025-11-23 20:21:10,283 [wrapper] cleanup supervisor_pilot 26302 10246
[2025-11-23 15:21:10] 2025-11-23 20:21:10,287 [wrapper] Test setup, not cleaning
[2025-11-23 15:21:10] 2025-11-23 20:21:10,291 [wrapper] apfmon messages muted
[2025-11-23 15:21:10] 2025-11-23 20:21:10,294 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:21:10] 2025-11-23 20:21:10,298 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:21:10]  *** Error codes and diagnostics ***
[2025-11-23 15:21:10]     "exeErrorCode": 0,
[2025-11-23 15:21:10]     "exeErrorDiag": "",
[2025-11-23 15:21:10]     "pilotErrorCode": 0,
[2025-11-23 15:21:10]     "pilotErrorDiag": "",
[2025-11-23 15:21:10]  *** Listing of results directory ***
[2025-11-23 15:21:10] total 1305712
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 11:22 pilot3.tar.gz
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 11:32 queuedata.json
[2025-11-23 15:21:10] -rwx------ 1 boincer umatlas     36292 Nov 22 11:34 runpilot2-wrapper.sh
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas       100 Nov 23 08:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:21:10] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 08:58 run_atlas
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas       105 Nov 23 08:58 job.xml
[2025-11-23 15:21:10] -rw-r--r-- 2 boincer umatlas 408180734 Nov 23 08:58 EVNT.47483658._000433.pool.root.1
[2025-11-23 15:21:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 08:58 start_atlas.sh
[2025-11-23 15:21:10] drwxrwx--x 2 boincer umatlas      4096 Nov 23 08:58 shared
[2025-11-23 15:21:10] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 08:58 input.tar.gz
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas         0 Nov 23 08:58 boinc_lockfile
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 08:58 pandaJob.out
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas        57 Nov 23 08:58 setup.sh.local
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas    989785 Nov 23 08:58 agis_schedconf.cvmfs.json
[2025-11-23 15:21:10] drwx------ 5 boincer umatlas      4096 Nov 23 08:58 pilot3
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas       533 Nov 23 15:12 boinc_task_state.xml
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas      5955 Nov 23 15:19 init_data.xml
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas 914251160 Nov 23 15:19 HITS.47556137._004290.pool.root.1
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas      1065 Nov 23 15:20 memory_monitor_summary.json
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas        95 Nov 23 15:20 pilot_heartbeat.json
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas   1526164 Nov 23 15:20 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas   2143021 Nov 23 15:20 log.47556137._004290.job.log.tgz.1
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas      8666 Nov 23 15:20 heartbeat.json
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 15:21 boinc_mmap_file
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas        29 Nov 23 15:21 wrapper_checkpoint.txt
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas      4746 Nov 23 15:21 pilotlog.txt
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas   3205704 Nov 23 15:21 log.47556137._004290.job.log.1
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas       353 Nov 23 15:21 output.list
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas       620 Nov 23 15:21 runtime_log
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas   5365760 Nov 23 15:21 result.tar.gz
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 15:21 runtime_log.err
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas       669 Nov 23 15:21 H5wKDmIk5g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiGKKDmxeGcOn.diag
[2025-11-23 15:21:10] -rw-r--r-- 1 boincer umatlas     21320 Nov 23 15:21 stderr.txt
[2025-11-23 15:21:10] HITS file was successfully produced:
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas 914251160 Nov 23 15:19 shared/HITS.pool.root.1
[2025-11-23 15:21:10]  *** Contents of shared directory: ***
[2025-11-23 15:21:10] total 1297280
[2025-11-23 15:21:10] -rw-r--r-- 2 boincer umatlas 408180734 Nov 23 08:58 ATLAS.root_0
[2025-11-23 15:21:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 08:58 start_atlas.sh
[2025-11-23 15:21:10] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 08:58 input.tar.gz
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas 914251160 Nov 23 15:19 HITS.pool.root.1
[2025-11-23 15:21:10] -rw------- 1 boincer umatlas   5365760 Nov 23 15:21 result.tar.gz
15:21:11 (6516): run_atlas exited; CPU time 260789.498583
15:21:11 (6516): called boinc_finish(0)

</stderr_txt>
]]>

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