Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:11:11 (1559): wrapper (7.7.26015): starting
00:11:11 (1559): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:11:11] Arguments: --nthreads 8
[2025-11-26 00:11:11] Threads: 8
[2025-11-26 00:11:11] Checking for CVMFS
[2025-11-26 00:11:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:11:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:11:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:11:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:11:14] 2.11.2.0 20802 84741 130364 153301 0 252 22654516 25165825 4214 130560 15 26165713 99.850 18399603 1787 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 00:11:14] CVMFS is ok
[2025-11-26 00:11:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:11:14] Checking for apptainer binary...
[2025-11-26 00:11:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:11:14] Running /usr/bin/apptainer --version
[2025-11-26 00:11:15] apptainer version 1.3.2-1.el7
[2025-11-26 00:11:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:11:19] cg-vwn369.simple-grid.lan
[2025-11-26 00:11:19] apptainer works
[2025-11-26 00:11:19] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:11:19] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:11:19] Starting ATLAS job with PandaID=6891603131
[2025-11-26 00:11:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:41:11]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:41:11] 2025-11-26 23:40:23,084 | INFO     | time since job start (87913s) is within the limit (172800.0s)
[2025-11-27 00:41:11] 2025-11-26 23:40:23,744 | INFO     | monitor loop #5927: job 0:6891603131 is in state 'finished'
[2025-11-27 00:41:11] 2025-11-26 23:40:23,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:41:11] 2025-11-26 23:40:25,091 | INFO     | time since job start (87915s) is within the limit (172800.0s)
[2025-11-27 00:41:11] 2025-11-26 23:40:26,250 | INFO     | monitor loop #5928: job 0:6891603131 is in state 'finished'
[2025-11-27 00:41:11] 2025-11-26 23:40:26,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:41:11] 2025-11-26 23:40:27,097 | INFO     | time since job start (87917s) is within the limit (172800.0s)
[2025-11-27 00:41:11] 2025-11-26 23:40:28,763 | INFO     | monitor loop #5929: job 0:6891603131 is in state 'finished'
[2025-11-27 00:41:11] 2025-11-26 23:40:28,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:41:11] 2025-11-26 23:40:29,104 | INFO     | time since job start (87919s) is within the limit (172800.0s)
[2025-11-27 00:41:11] 2025-11-26 23:40:31,112 | INFO     | time since job start (87921s) is within the limit (172800.0s)
[2025-11-27 00:41:11] 2025-11-26 23:40:31,273 | INFO     | monitor loop #5930: job 0:6891603131 is in state 'finished'
[2025-11-27 00:41:11] 2025-11-26 23:40:31,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:41:11] 2025-11-26 23:40:32,680 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 00:41:11] 2025-11-26 23:40:32,681 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 00:41:11] 2025-11-26 23:40:32,683 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6891603131/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:41:11] 2025-11-26 23:40:32,683 | INFO     | extracted standard info from prmon json
[2025-11-27 00:41:11] 2025-11-26 23:40:32,684 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:41:11] 2025-11-26 23:40:32,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:41:11] 2025-11-26 23:40:32,710 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:41:11] 2025-11-26 23:40:32,713 | INFO     | sum of square deviations: 908645414224.5549
[2025-11-27 00:41:11] 2025-11-26 23:40:32,786 | INFO     | sum of deviations: 2217618951139.9653
[2025-11-27 00:41:11] 2025-11-26 23:40:32,786 | INFO     | mean x: 1764156688.1104124
[2025-11-27 00:41:11] 2025-11-26 23:40:32,786 | INFO     | mean y: 2864015.405310971
[2025-11-27 00:41:11] 2025-11-26 23:40:32,786 | INFO     | intersect: -4302695934.702063
[2025-11-27 00:41:11] 2025-11-26 23:40:32,788 | INFO     | chi2: 15.384297170522329
[2025-11-27 00:41:11] 2025-11-26 23:40:32,790 | INFO     | sum of square deviations: 899154492995.8677
[2025-11-27 00:41:11] 2025-11-26 23:40:32,853 | INFO     | sum of deviations: 2693485101957.4956
[2025-11-27 00:41:11] 2025-11-26 23:40:32,854 | INFO     | mean x: 1764156535.6143057
[2025-11-27 00:41:11] 2025-11-26 23:40:32,854 | INFO     | mean y: 2871660.573632539
[2025-11-27 00:41:11] 2025-11-26 23:40:32,854 | INFO     | intersect: -5281792302.307682
[2025-11-27 00:41:11] 2025-11-26 23:40:32,856 | INFO     | chi2: 12.161477960683655
[2025-11-27 00:41:11] 2025-11-26 23:40:32,856 | INFO     | current chi2=12.161477960683655 (change=20.948758166306618 %)
[2025-11-27 00:41:11] 2025-11-26 23:40:32,856 | INFO     | right removable region: 1425
[2025-11-27 00:41:11] 2025-11-26 23:40:32,858 | INFO     | sum of square deviations: 899153523705.8682
[2025-11-27 00:41:11] 2025-11-26 23:40:32,923 | INFO     | sum of deviations: 1763809852708.6123
[2025-11-27 00:41:11] 2025-11-26 23:40:32,924 | INFO     | mean x: 1764156840.6143057
[2025-11-27 00:41:11] 2025-11-26 23:40:32,924 | INFO     | mean y: 2871303.0974754556
[2025-11-27 00:41:11] 2025-11-26 23:40:32,924 | INFO     | intersect: -3457758205.8368526
[2025-11-27 00:41:11] 2025-11-26 23:40:32,926 | INFO     | chi2: 12.728562341425663
[2025-11-27 00:41:11] 2025-11-26 23:40:32,926 | INFO     | current chi2=12.728562341425663 (change=17.262633447989344 %)
[2025-11-27 00:41:11] 2025-11-26 23:40:32,926 | INFO     | left removable region: 10
[2025-11-27 00:41:11] 2025-11-26 23:40:32,928 | INFO     | sum of square deviations: 878506276667.2896
[2025-11-27 00:41:11] 2025-11-26 23:40:32,990 | INFO     | sum of deviations: 2251244384327.032
[2025-11-27 00:41:11] 2025-11-26 23:40:32,991 | INFO     | mean x: 1764156810.1180212
[2025-11-27 00:41:11] 2025-11-26 23:40:32,991 | INFO     | mean y: 2882574.041696113
[2025-11-27 00:41:11] 2025-11-26 23:40:32,991 | INFO     | intersect: -4517913938.553514
[2025-11-27 00:41:11] 2025-11-26 23:40:32,993 | INFO     | chi2: 8.504512007633632
[2025-11-27 00:41:11] 2025-11-26 23:40:32,993 | INFO     | current memory leak: 2.56 B/s (using 1415 data points, chi2=8.50)
[2025-11-27 00:41:11] 2025-11-26 23:40:32,994 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-27 00:41:11] 2025-11-26 23:40:32,994 | INFO     | ..............................
[2025-11-27 00:41:11] 2025-11-26 23:40:32,995 | INFO     | . Timing measurements:
[2025-11-27 00:41:11] 2025-11-26 23:40:32,995 | INFO     | . get job = 0 s
[2025-11-27 00:41:11] 2025-11-26 23:40:32,995 | INFO     | . initial setup = 12 s
[2025-11-27 00:41:11] 2025-11-26 23:40:32,995 | INFO     | . payload setup = 166 s
[2025-11-27 00:41:11] 2025-11-26 23:40:32,995 | INFO     | . stage-in = 0 s
[2025-11-27 00:41:11] 2025-11-26 23:40:32,995 | INFO     | . payload execution = 87412 s
[2025-11-27 00:41:11] 2025-11-26 23:40:32,995 | INFO     | . stage-out = 9 s
[2025-11-27 00:41:11] 2025-11-26 23:40:32,995 | INFO     | . log creation = 2 s
[2025-11-27 00:41:11] 2025-11-26 23:40:32,995 | INFO     | ..............................
[2025-11-27 00:41:11] 2025-11-26 23:40:33,123 | INFO     | time since job start (87923s) is within the limit (172800.0s)
[2025-11-27 00:41:11] 2025-11-26 23:40:33,123 | INFO     | 
[2025-11-27 00:41:11] 2025-11-26 23:40:33,123 | INFO     | job summary report
[2025-11-27 00:41:11] 2025-11-26 23:40:33,124 | INFO     | --------------------------------------------------
[2025-11-27 00:41:11] 2025-11-26 23:40:33,124 | INFO     | PanDA job id: 6891603131
[2025-11-27 00:41:11] 2025-11-26 23:40:33,124 | INFO     | task id: 47493068
[2025-11-27 00:41:11] 2025-11-26 23:40:33,124 | INFO     | errors: (none)
[2025-11-27 00:41:11] 2025-11-26 23:40:33,124 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:41:11] 2025-11-26 23:40:33,124 | INFO     | pilot state: finished 
[2025-11-27 00:41:11] 2025-11-26 23:40:33,124 | INFO     | transexitcode: 0
[2025-11-27 00:41:11] 2025-11-26 23:40:33,124 | INFO     | exeerrorcode: 0
[2025-11-27 00:41:11] 2025-11-26 23:40:33,124 | INFO     | exeerrordiag: 
[2025-11-27 00:41:11] 2025-11-26 23:40:33,125 | INFO     | exitcode: 0
[2025-11-27 00:41:11] 2025-11-26 23:40:33,125 | INFO     | exitmsg: OK
[2025-11-27 00:41:11] 2025-11-26 23:40:33,125 | INFO     | cpuconsumptiontime: 332274 s
[2025-11-27 00:41:11] 2025-11-26 23:40:33,125 | INFO     | nevents: 1000
[2025-11-27 00:41:11] 2025-11-26 23:40:33,125 | INFO     | neventsw: 0
[2025-11-27 00:41:11] 2025-11-26 23:40:33,125 | INFO     | pid: 12032
[2025-11-27 00:41:11] 2025-11-26 23:40:33,125 | INFO     | pgrp: 12032
[2025-11-27 00:41:11] 2025-11-26 23:40:33,125 | INFO     | corecount: 8
[2025-11-27 00:41:11] 2025-11-26 23:40:33,125 | INFO     | event service: False
[2025-11-27 00:41:11] 2025-11-26 23:40:33,126 | INFO     | sizes: {0: 2283476, 1: 2284161, 2: 2284360, 13: 2284360, 24: 2284416, 34: 2284444, 45: 2284600, 56: 2284628, 67: 2284656, 78: 2284684, 88: 2284740, 99: 2285048, 11
[2025-11-27 00:41:11] 2025-11-26 23:40:33,126 | INFO     | --------------------------------------------------
[2025-11-27 00:41:11] 2025-11-26 23:40:33,126 | INFO     | 
[2025-11-27 00:41:11] 2025-11-26 23:40:33,126 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-27 00:41:11] 2025-11-26 23:40:33,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,149 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:41:11] 2025-11-26 23:40:33,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:41:11] 2025-11-26 23:40:33,150 | INFO     | job 6891603131 has completed (purged errors)
[2025-11-27 00:41:11] 2025-11-26 23:40:33,150 | INFO     | overall cleanup function is called
[2025-11-27 00:41:11] 2025-11-26 23:40:34,168 | INFO     | --- collectZombieJob: --- 10, [12032]
[2025-11-27 00:41:11] 2025-11-26 23:40:34,168 | INFO     | zombie collector waiting for pid 12032
[2025-11-27 00:41:11] 2025-11-26 23:40:34,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:41:11] 2025-11-26 23:40:34,168 | INFO     | collected zombie processes
[2025-11-27 00:41:11] 2025-11-26 23:40:34,168 | INFO     | will attempt to kill all subprocesses of pid=12032
[2025-11-27 00:41:11] 2025-11-26 23:40:34,283 | INFO     | process IDs to be killed: [12032] (in reverse order)
[2025-11-27 00:41:11] 2025-11-26 23:40:34,872 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:41:11] 2025-11-26 23:40:34,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:41:11] 2025-11-26 23:40:34,876 | INFO     | did not find any defunct processes belonging to 12032
[2025-11-27 00:41:11] 2025-11-26 23:40:34,879 | INFO     | did not find any defunct processes belonging to 12032
[2025-11-27 00:41:11] 2025-11-26 23:40:34,930 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:41:11] 2025-11-26 23:40:34,930 | INFO     | ready for new job
[2025-11-27 00:41:11] 2025-11-26 23:40:34,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:41:11] 2025-11-26 23:40:34,935 | INFO     | ***************************************
[2025-11-27 00:41:11] 2025-11-26 23:40:34,936 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:41:11] 2025-11-26 23:40:34,936 | INFO     | ***************************************
[2025-11-27 00:41:11] 2025-11-26 23:40:34,936 | INFO     | 
[2025-11-27 00:41:11] 2025-11-26 23:40:34,937 | INFO     | pilot is running in a VM
[2025-11-27 00:41:11] 2025-11-26 23:40:34,937 | INFO     | architecture information:
[2025-11-27 00:41:11] 2025-11-26 23:40:34,964 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:41:11] 2025-11-26 23:40:35,246 | INFO     | cat /etc/os-release:
[2025-11-27 00:41:11] NAME="CentOS Linux"
[2025-11-27 00:41:11] VERSION="7 (Core)"
[2025-11-27 00:41:11] ID="centos"
[2025-11-27 00:41:11] ID_LIKE="rhel fedora"
[2025-11-27 00:41:11] VERSION_ID="7"
[2025-11-27 00:41:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:41:11] ANSI_COLOR="0;31"
[2025-11-27 00:41:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:41:11] HOME_URL="https://www.centos.org/"
[2025-11-27 00:41:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:41:11] 
[2025-11-27 00:41:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:41:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:41:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:41:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:41:11] 
[2025-11-27 00:41:11] 2025-11-26 23:40:35,246 | INFO     | ***************************************
[2025-11-27 00:41:11] 2025-11-26 23:40:35,750 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-27 00:41:11] 2025-11-26 23:40:36,056 | INFO     | sufficient remaining disk space (495548628992 B)
[2025-11-27 00:41:11] 2025-11-26 23:40:36,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:41:11] 2025-11-26 23:40:36,056 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:41:11] 2025-11-26 23:40:36,057 | INFO     | update_server=False
[2025-11-27 00:41:11] 2025-11-26 23:40:36,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:41:11] 2025-11-26 23:40:36,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:41:11] 2025-11-26 23:40:36,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:41:11] 2025-11-26 23:40:36,286 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 00:41:11] 2025-11-26 23:40:36,287 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 00:41:11] 2025-11-26 23:40:36,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:41:11] 2025-11-26 23:40:36,287 | INFO     | will abort loop
[2025-11-27 00:41:11] 2025-11-26 23:40:36,652 | INFO     | all payload control threads have been joined
[2025-11-27 00:41:11] 2025-11-26 23:40:36,885 | INFO     | all data control threads have been joined
[2025-11-27 00:41:11] 2025-11-26 23:40:37,063 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:37,186 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:37,293 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:37,448 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:37,504 | INFO     | [job] validate thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:37,662 | INFO     | [payload] control thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:37,677 | INFO     | all job control threads have been joined
[2025-11-27 00:41:11] 2025-11-26 23:40:37,891 | INFO     | [data] control thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:37,968 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:38,012 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:38,138 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:41:11] 2025-11-26 23:40:38,171 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:38,274 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:38,336 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:38,536 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:38,684 | INFO     | [job] control thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:39,144 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:40,067 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:41:11] 2025-11-26 23:40:43,509 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:41:11] 2025-11-26 23:40:45,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233058953024)>', '<ExcThread(monitor, started 140232477366016)>']
[2025-11-27 00:41:11] 2025-11-26 23:40:50,123 | INFO     | all workflow threads have been joined
[2025-11-27 00:41:11] 2025-11-26 23:40:50,123 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:41:11] 2025-11-26 23:40:50,123 | INFO     | traces error code: 0
[2025-11-27 00:41:11] 2025-11-26 23:40:50,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:41:11] 2025-11-26 23:41:06,344 | INFO     | PID=5384 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 00:41:11] 2025-11-26 23:41:06,344 | INFO     | .. there are 9 such processes running
[2025-11-27 00:41:11] 2025-11-26 23:41:06,346 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:41:11] 2025-11-26 23:41:06,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:41:11] 2025-11-26 23:41:06,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:41:11] 2025-11-26 23:41:06,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:41:11] 2025-11-26 23:41:06,346 | INFO     | [monitor] control thread has ended
[2025-11-27 00:41:11] 2025-11-26 23:41:06,600 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:41:11] 2025-11-26 23:41:06,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:41:11] 2025-11-26 23:41:06,791 [wrapper] pilotpid: 5384
[2025-11-27 00:41:11] 2025-11-26 23:41:06,845 [wrapper] Pilot exit status: 0
[2025-11-27 00:41:11] 2025-11-26 23:41:07,176 [wrapper] pandaids: 6891603131
[2025-11-27 00:41:11] 2025-11-26 23:41:08,077 [wrapper] cleanup supervisor_pilot 13047 5385
[2025-11-27 00:41:11] 2025-11-26 23:41:08,140 [wrapper] Test setup, not cleaning
[2025-11-27 00:41:11] 2025-11-26 23:41:08,266 [wrapper] apfmon messages muted
[2025-11-27 00:41:11] 2025-11-26 23:41:08,364 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:41:11] 2025-11-26 23:41:08,456 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:41:11]  *** Error codes and diagnostics ***
[2025-11-27 00:41:11]     "exeErrorCode": 0,
[2025-11-27 00:41:11]     "exeErrorDiag": "",
[2025-11-27 00:41:11]     "pilotErrorCode": 0,
[2025-11-27 00:41:11]     "pilotErrorDiag": "",
[2025-11-27 00:41:11]  *** Listing of results directory ***
[2025-11-27 00:41:11] total 1327132
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc    576529 Nov 18 20:37 pilot3.tar.gz
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc      5112 Nov 18 20:37 queuedata.json
[2025-11-27 00:41:11] -rwx------. 1 boinc boinc     36292 Nov 18 20:39 runpilot2-wrapper.sh
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc       100 Nov 26 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:41:11] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 00:11 run_atlas
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc       105 Nov 26 00:11 job.xml
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc      6391 Nov 26 00:11 init_data.xml
[2025-11-27 00:41:11] -rw-r--r--. 2 boinc boinc 408062042 Nov 26 00:11 EVNT.47493065._000962.pool.root.1
[2025-11-27 00:41:11] -rw-r--r--. 2 boinc boinc     15120 Nov 26 00:11 start_atlas.sh
[2025-11-27 00:41:11] drwxrwx--x. 2 boinc boinc        68 Nov 26 00:11 shared
[2025-11-27 00:41:11] -rw-r--r--. 2 boinc boinc    590101 Nov 26 00:11 input.tar.gz
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc         0 Nov 26 00:11 boinc_lockfile
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc      2773 Nov 26 00:11 pandaJob.out
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc    991877 Nov 26 00:15 agis_schedconf.cvmfs.json
[2025-11-27 00:41:11] drwx------. 5 boinc boinc      4096 Nov 26 00:15 pilot3
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc       533 Nov 27 00:16 boinc_task_state.xml
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc 918667949 Nov 27 00:37 HITS.47493068._007513.pool.root.1
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc      1028 Nov 27 00:38 memory_monitor_summary.json
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc   1516240 Nov 27 00:38 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc   2500112 Nov 27 00:38 log.47493068._007513.job.log.tgz.1
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc      8641 Nov 27 00:40 heartbeat.json
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc      8192 Nov 27 00:40 boinc_mmap_file
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc        29 Nov 27 00:40 wrapper_checkpoint.txt
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc        95 Nov 27 00:41 pilot_heartbeat.json
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc       819 Nov 27 00:41 pilotlog.txt
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc  11673914 Nov 27 00:41 log.47493068._007513.job.log.1
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc       353 Nov 27 00:41 output.list
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc       620 Nov 27 00:41 runtime_log
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc  14192640 Nov 27 00:41 result.tar.gz
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc      8703 Nov 27 00:41 runtime_log.err
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc       662 Nov 27 00:41 Q6SMDmhigf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBXGKDmd9ha8n.diag
[2025-11-27 00:41:11] -rw-r--r--. 1 boinc boinc     21413 Nov 27 00:41 stderr.txt
[2025-11-27 00:41:11] HITS file was successfully produced:
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc 918667949 Nov 27 00:37 shared/HITS.pool.root.1
[2025-11-27 00:41:11]  *** Contents of shared directory: ***
[2025-11-27 00:41:11] total 1310096
[2025-11-27 00:41:11] -rw-r--r--. 2 boinc boinc 408062042 Nov 26 00:11 ATLAS.root_0
[2025-11-27 00:41:11] -rw-r--r--. 2 boinc boinc     15120 Nov 26 00:11 start_atlas.sh
[2025-11-27 00:41:11] -rw-r--r--. 2 boinc boinc    590101 Nov 26 00:11 input.tar.gz
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc 918667949 Nov 27 00:37 HITS.pool.root.1
[2025-11-27 00:41:11] -rw-------. 1 boinc boinc  14192640 Nov 27 00:41 result.tar.gz
00:41:12 (1559): run_atlas exited; CPU time 332904.970654
00:41:12 (1559): called boinc_finish(0)

</stderr_txt>
]]>

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