Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:24:13 (29921): wrapper (7.7.26015): starting
09:24:13 (29921): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 09:24:13] Arguments: --nthreads 8
[2025-11-23 09:24:13] Threads: 8
[2025-11-23 09:24:13] Checking for CVMFS
[2025-11-23 09:24:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 09:24:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 09:24:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 09:24:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 09:24:13] 2.11.2.0 8318 113545 131668 153211 3 90 12204070 18432001 1060 130560 0 80450721 99.972 4968459 31678 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 09:24:13] CVMFS is ok
[2025-11-23 09:24:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 09:24:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 09:24:13] Further information can be found at the LHC@home message board.
[2025-11-23 09:24:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 09:24:13] Checking for apptainer binary...
[2025-11-23 09:24:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 09:24:13] Running /usr/bin/apptainer --version
[2025-11-23 09:24:13] apptainer version 1.3.2-1.el7
[2025-11-23 09:24:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 09:24:14] c-206-28.aglt2.org
[2025-11-23 09:24:14] apptainer works
[2025-11-23 09:24:14] Set ATHENA_PROC_NUMBER=8
[2025-11-23 09:24:14] Set ATHENA_CORE_NUMBER=8
[2025-11-23 09:24:14] Starting ATLAS job with PandaID=6894052133
[2025-11-23 09:24:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:10:18]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:10:18] 2025-11-23 22:09:20,336 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-23 17:10:18] 2025-11-23 22:09:21,172 | INFO     | monitor loop #1992: job 0:6894052133 is in state 'finished'
[2025-11-23 17:10:18] 2025-11-23 22:09:21,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:10:18] 2025-11-23 22:09:21,605 | INFO     | time since job start (27896s) is within the limit (172800.0s)
[2025-11-23 17:10:18] 2025-11-23 22:09:23,577 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 17:10:18] 2025-11-23 22:09:23,583 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2494.5416666666665
[2025-11-23 17:10:18] 2025-11-23 22:09:23,587 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894052133/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 17:10:18] 2025-11-23 22:09:23,589 | INFO     | extracted standard info from prmon json
[2025-11-23 17:10:18] 2025-11-23 22:09:23,589 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:10:18] 2025-11-23 22:09:23,589 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:10:18] 2025-11-23 22:09:23,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 17:10:18] 2025-11-23 22:09:23,589 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 17:10:18] 2025-11-23 22:09:23,602 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:10:18] 2025-11-23 22:09:23,603 | INFO     | sum of square deviations: 29595449788.0
[2025-11-23 17:10:18] 2025-11-23 22:09:23,610 | INFO     | sum of deviations: 19996887080.999996
[2025-11-23 17:10:18] 2025-11-23 22:09:23,611 | INFO     | mean x: 1763921798.0
[2025-11-23 17:10:18] 2025-11-23 22:09:23,611 | INFO     | mean y: 2568668.4945295407
[2025-11-23 17:10:18] 2025-11-23 22:09:23,611 | INFO     | intersect: -1189268092.4599373
[2025-11-23 17:10:18] 2025-11-23 22:09:23,612 | INFO     | chi2: 1.4399001647773502
[2025-11-23 17:10:18] 2025-11-23 22:09:23,612 | INFO     | sum of square deviations: 28634631773.0
[2025-11-23 17:10:18] 2025-11-23 22:09:23,618 | INFO     | time since job start (27898s) is within the limit (172800.0s)
[2025-11-23 17:10:18] 2025-11-23 22:09:23,620 | INFO     | sum of deviations: 19446583297.500004
[2025-11-23 17:10:18] 2025-11-23 22:09:23,620 | INFO     | mean x: 1763921645.5
[2025-11-23 17:10:18] 2025-11-23 22:09:23,621 | INFO     | mean y: 2568581.1792035396
[2025-11-23 17:10:18] 2025-11-23 22:09:23,621 | INFO     | intersect: -1195360188.4801674
[2025-11-23 17:10:18] 2025-11-23 22:09:23,622 | INFO     | chi2: 1.4399327701449567
[2025-11-23 17:10:18] 2025-11-23 22:09:23,622 | INFO     | current chi2=1.4399327701449567 (change=-0.0022644186315209838 %)
[2025-11-23 17:10:18] 2025-11-23 22:09:23,622 | INFO     | right removable region: 451
[2025-11-23 17:10:18] 2025-11-23 22:09:23,623 | INFO     | sum of square deviations: 28634631773.0
[2025-11-23 17:10:18] 2025-11-23 22:09:23,630 | INFO     | sum of deviations: -43065293681.0
[2025-11-23 17:10:18] 2025-11-23 22:09:23,630 | INFO     | mean x: 1763921950.5
[2025-11-23 17:10:18] 2025-11-23 22:09:23,631 | INFO     | mean y: 2578624.9734513275
[2025-11-23 17:10:18] 2025-11-23 22:09:23,631 | INFO     | intersect: 2655443778.9885345
[2025-11-23 17:10:18] 2025-11-23 22:09:23,631 | INFO     | chi2: 0.21167364403366715
[2025-11-23 17:10:18] 2025-11-23 22:09:23,632 | INFO     | current chi2=0.21167364403366715 (change=85.29942219526046 %)
[2025-11-23 17:10:18] 2025-11-23 22:09:23,632 | INFO     | sum of square deviations: 27694837408.0
[2025-11-23 17:10:18] 2025-11-23 22:09:23,640 | INFO     | sum of deviations: -53979102947.000015
[2025-11-23 17:10:18] 2025-11-23 22:09:23,640 | INFO     | mean x: 1763922103.0
[2025-11-23 17:10:18] 2025-11-23 22:09:23,640 | INFO     | mean y: 2580395.9753914988
[2025-11-23 17:10:18] 2025-11-23 22:09:23,640 | INFO     | intersect: 3440583348.858651
[2025-11-23 17:10:18] 2025-11-23 22:09:23,641 | INFO     | chi2: 0.18597548647245857
[2025-11-23 17:10:18] 2025-11-23 22:09:23,641 | INFO     | current chi2=0.18597548647245857 (change=12.140461642509084 %)
[2025-11-23 17:10:18] 2025-11-23 22:09:23,642 | INFO     | left removable region: 20
[2025-11-23 17:10:18] 2025-11-23 22:09:23,642 | INFO     | sum of square deviations: 24826065480.0
[2025-11-23 17:10:18] 2025-11-23 22:09:23,649 | INFO     | sum of deviations: -46027011796.99999
[2025-11-23 17:10:18] 2025-11-23 22:09:23,650 | INFO     | mean x: 1763922225.0
[2025-11-23 17:10:18] 2025-11-23 22:09:23,650 | INFO     | mean y: 2579100.048723898
[2025-11-23 17:10:18] 2025-11-23 22:09:23,650 | INFO     | intersect: 3272854413.0849752
[2025-11-23 17:10:18] 2025-11-23 22:09:23,651 | INFO     | chi2: 0.1547616893314377
[2025-11-23 17:10:18] 2025-11-23 22:09:23,651 | INFO     | current memory leak: -1.85 B/s (using 431 data points, chi2=0.15)
[2025-11-23 17:10:18] 2025-11-23 22:09:23,652 | INFO     | could have reported an average CPU frequency of 2561 MHz (19 samples)
[2025-11-23 17:10:18] 2025-11-23 22:09:23,652 | INFO     | ..............................
[2025-11-23 17:10:18] 2025-11-23 22:09:23,652 | INFO     | . Timing measurements:
[2025-11-23 17:10:18] 2025-11-23 22:09:23,652 | INFO     | . get job = 0 s
[2025-11-23 17:10:18] 2025-11-23 22:09:23,653 | INFO     | . initial setup = 2 s
[2025-11-23 17:10:18] 2025-11-23 22:09:23,653 | INFO     | . payload setup = 5 s
[2025-11-23 17:10:18] 2025-11-23 22:09:23,653 | INFO     | . stage-in = 0 s
[2025-11-23 17:10:18] 2025-11-23 22:09:23,653 | INFO     | . payload execution = 27866 s
[2025-11-23 17:10:18] 2025-11-23 22:09:23,653 | INFO     | . stage-out = 2 s
[2025-11-23 17:10:18] 2025-11-23 22:09:23,654 | INFO     | . log creation = 0 s
[2025-11-23 17:10:18] 2025-11-23 22:09:23,654 | INFO     | ..............................
[2025-11-23 17:10:18] 2025-11-23 22:09:24,141 | INFO     | 
[2025-11-23 17:10:18] 2025-11-23 22:09:24,141 | INFO     | job summary report
[2025-11-23 17:10:18] 2025-11-23 22:09:24,142 | INFO     | --------------------------------------------------
[2025-11-23 17:10:18] 2025-11-23 22:09:24,142 | INFO     | PanDA job id: 6894052133
[2025-11-23 17:10:18] 2025-11-23 22:09:24,142 | INFO     | task id: 47523659
[2025-11-23 17:10:18] 2025-11-23 22:09:24,142 | INFO     | errors: (none)
[2025-11-23 17:10:18] 2025-11-23 22:09:24,142 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:10:18] 2025-11-23 22:09:24,142 | INFO     | pilot state: finished 
[2025-11-23 17:10:18] 2025-11-23 22:09:24,143 | INFO     | transexitcode: 0
[2025-11-23 17:10:18] 2025-11-23 22:09:24,143 | INFO     | exeerrorcode: 0
[2025-11-23 17:10:18] 2025-11-23 22:09:24,143 | INFO     | exeerrordiag: 
[2025-11-23 17:10:18] 2025-11-23 22:09:24,143 | INFO     | exitcode: 0
[2025-11-23 17:10:18] 2025-11-23 22:09:24,143 | INFO     | exitmsg: OK
[2025-11-23 17:10:18] 2025-11-23 22:09:24,143 | INFO     | cpuconsumptiontime: 213055 s
[2025-11-23 17:10:18] 2025-11-23 22:09:24,144 | INFO     | nevents: 400
[2025-11-23 17:10:18] 2025-11-23 22:09:24,144 | INFO     | neventsw: 0
[2025-11-23 17:10:18] 2025-11-23 22:09:24,144 | INFO     | pid: 7855
[2025-11-23 17:10:18] 2025-11-23 22:09:24,144 | INFO     | pgrp: 7855
[2025-11-23 17:10:18] 2025-11-23 22:09:24,144 | INFO     | corecount: 8
[2025-11-23 17:10:18] 2025-11-23 22:09:24,144 | INFO     | event service: False
[2025-11-23 17:10:18] 2025-11-23 22:09:24,145 | INFO     | sizes: {0: 2298274, 1: 2298473, 4: 2298735, 11: 2298763, 27877: 2335412, 27879: 2344410, 27880: 2344594, 27884: 2344788}
[2025-11-23 17:10:18] 2025-11-23 22:09:24,145 | INFO     | --------------------------------------------------
[2025-11-23 17:10:18] 2025-11-23 22:09:24,145 | INFO     | 
[2025-11-23 17:10:18] 2025-11-23 22:09:24,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 17:10:18] 2025-11-23 22:09:24,163 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,163 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,163 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,163 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:10:18] 2025-11-23 22:09:24,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:10:18] 2025-11-23 22:09:24,166 | INFO     | job 6894052133 has completed (purged errors)
[2025-11-23 17:10:18] 2025-11-23 22:09:24,167 | INFO     | overall cleanup function is called
[2025-11-23 17:10:18] 2025-11-23 22:09:25,175 | INFO     | --- collectZombieJob: --- 10, [7855]
[2025-11-23 17:10:18] 2025-11-23 22:09:25,175 | INFO     | zombie collector waiting for pid 7855
[2025-11-23 17:10:18] 2025-11-23 22:09:25,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:10:18] 2025-11-23 22:09:25,175 | INFO     | collected zombie processes
[2025-11-23 17:10:18] 2025-11-23 22:09:25,176 | INFO     | will attempt to kill all subprocesses of pid=7855
[2025-11-23 17:10:18] 2025-11-23 22:09:25,349 | INFO     | process IDs to be killed: [7855] (in reverse order)
[2025-11-23 17:10:18] 2025-11-23 22:09:25,401 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:10:18] 2025-11-23 22:09:25,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:10:18] 2025-11-23 22:09:25,404 | INFO     | did not find any defunct processes belonging to 7855
[2025-11-23 17:10:18] 2025-11-23 22:09:25,406 | INFO     | did not find any defunct processes belonging to 7855
[2025-11-23 17:10:18] 2025-11-23 22:09:25,407 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:10:18] 2025-11-23 22:09:25,408 | INFO     | ready for new job
[2025-11-23 17:10:18] 2025-11-23 22:09:25,408 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:10:18] 2025-11-23 22:09:25,410 | INFO     | ***************************************
[2025-11-23 17:10:18] 2025-11-23 22:09:25,410 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:10:18] 2025-11-23 22:09:25,410 | INFO     | ***************************************
[2025-11-23 17:10:18] 2025-11-23 22:09:25,410 | INFO     | 
[2025-11-23 17:10:18] 2025-11-23 22:09:25,411 | INFO     | architecture information:
[2025-11-23 17:10:18] 2025-11-23 22:09:25,411 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:10:18] 2025-11-23 22:09:25,421 | INFO     | cat /etc/os-release:
[2025-11-23 17:10:18] NAME="CentOS Linux"
[2025-11-23 17:10:18] VERSION="7 (Core)"
[2025-11-23 17:10:18] ID="centos"
[2025-11-23 17:10:18] ID_LIKE="rhel fedora"
[2025-11-23 17:10:18] VERSION_ID="7"
[2025-11-23 17:10:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:10:18] ANSI_COLOR="0;31"
[2025-11-23 17:10:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:10:18] HOME_URL="https://www.centos.org/"
[2025-11-23 17:10:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:10:18] 
[2025-11-23 17:10:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:10:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:10:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:10:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:10:18] 
[2025-11-23 17:10:18] 2025-11-23 22:09:25,421 | INFO     | ***************************************
[2025-11-23 17:10:18] 2025-11-23 22:09:25,704 [wrapper] supervise_pilot (15 min periods counter: 32)
[2025-11-23 17:10:18] 2025-11-23 22:09:25,925 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 17:10:18] 2025-11-23 22:09:25,975 | INFO     | sufficient remaining disk space (26484932608 B)
[2025-11-23 17:10:18] 2025-11-23 22:09:25,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:10:18] 2025-11-23 22:09:25,976 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:10:18] 2025-11-23 22:09:25,976 | INFO     | update_server=False
[2025-11-23 17:10:18] 2025-11-23 22:09:25,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:10:18] 2025-11-23 22:09:25,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:10:18] 2025-11-23 22:09:26,206 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 17:10:18] 2025-11-23 22:09:26,207 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 17:10:18] 2025-11-23 22:09:26,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:10:18] 2025-11-23 22:09:26,240 | INFO     | will abort loop
[2025-11-23 17:10:18] 2025-11-23 22:09:26,867 | INFO     | all data control threads have been joined
[2025-11-23 17:10:18] 2025-11-23 22:09:26,920 | INFO     | all payload control threads have been joined
[2025-11-23 17:10:18] 2025-11-23 22:09:26,977 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:27,172 | INFO     | all job control threads have been joined
[2025-11-23 17:10:18] 2025-11-23 22:09:27,204 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:27,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:10:18] 2025-11-23 22:09:27,245 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:27,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:27,346 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:27,589 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:27,589 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:27,873 | INFO     | [data] control thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:27,926 | INFO     | [payload] control thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:27,985 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:28,178 | INFO     | [job] control thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:28,296 | INFO     | [job] validate thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:28,314 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:28,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:10:18] 2025-11-23 22:09:29,245 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:29,788 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:29,978 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:10:18] 2025-11-23 22:09:56,883 | INFO     | PID=1195 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 17:10:18] 2025-11-23 22:09:56,883 | INFO     | .. there are 3 such processes running
[2025-11-23 17:10:18] 2025-11-23 22:09:56,884 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:10:18] 2025-11-23 22:09:56,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:10:18] 2025-11-23 22:09:56,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:10:18] 2025-11-23 22:10:11,860 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:10:18] 2025-11-23 22:10:13,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372033468224)>', '<ExcThread(monitor, started 140371594041088)>']
[2025-11-23 17:10:18] 2025-11-23 22:10:13,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:10:18] 2025-11-23 22:10:13,968 | INFO     | [monitor] control thread has ended
[2025-11-23 17:10:18] 2025-11-23 22:10:18,710 | INFO     | all workflow threads have been joined
[2025-11-23 17:10:18] 2025-11-23 22:10:18,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:10:18] 2025-11-23 22:10:18,711 | INFO     | traces error code: 0
[2025-11-23 17:10:18] 2025-11-23 22:10:18,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:10:18] 2025-11-23 22:10:18,805 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:10:18] 2025-11-23 22:10:18,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:10:18] 2025-11-23 22:10:18,810 [wrapper] pilotpid: 1195
[2025-11-23 17:10:18] 2025-11-23 22:10:18,812 [wrapper] Pilot exit status: 0
[2025-11-23 17:10:18] 2025-11-23 22:10:18,822 [wrapper] pandaids: 6894052133
[2025-11-23 17:10:18] 2025-11-23 22:10:18,858 [wrapper] cleanup supervisor_pilot   674 1196
[2025-11-23 17:10:18] 2025-11-23 22:10:18,861 [wrapper] Test setup, not cleaning
[2025-11-23 17:10:18] 2025-11-23 22:10:18,863 [wrapper] apfmon messages muted
[2025-11-23 17:10:18] 2025-11-23 22:10:18,865 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:10:18] 2025-11-23 22:10:18,867 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:10:18]  *** Error codes and diagnostics ***
[2025-11-23 17:10:18]     "exeErrorCode": 0,
[2025-11-23 17:10:18]     "exeErrorDiag": "",
[2025-11-23 17:10:18]     "pilotErrorCode": 0,
[2025-11-23 17:10:18]     "pilotErrorDiag": "",
[2025-11-23 17:10:18]  *** Listing of results directory ***
[2025-11-23 17:10:18] total 623508
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 11:22 pilot3.tar.gz
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 11:42 queuedata.json
[2025-11-23 17:10:18] -rwx------ 1 boincer umatlas     36292 Nov 22 11:43 runpilot2-wrapper.sh
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas       100 Nov 23 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:10:18] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 09:23 run_atlas
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas       105 Nov 23 09:23 job.xml
[2025-11-23 17:10:18] -rw-r--r-- 2 boincer umatlas 302121022 Nov 23 09:24 EVNT.47523657._000005.pool.root.1
[2025-11-23 17:10:18] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 09:24 start_atlas.sh
[2025-11-23 17:10:18] drwxrwx--x 2 boincer umatlas      4096 Nov 23 09:24 shared
[2025-11-23 17:10:18] -rw-r--r-- 2 boincer umatlas    589950 Nov 23 09:24 input.tar.gz
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas         0 Nov 23 09:24 boinc_lockfile
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas      2614 Nov 23 09:24 pandaJob.out
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas        57 Nov 23 09:24 setup.sh.local
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas    989785 Nov 23 09:24 agis_schedconf.cvmfs.json
[2025-11-23 17:10:18] drwx------ 5 boincer umatlas      4096 Nov 23 09:24 pilot3
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 17:00 init_data.xml
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas 323468729 Nov 23 17:08 HITS.47523659._000107.pool.root.1
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas       532 Nov 23 17:08 boinc_task_state.xml
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas      1052 Nov 23 17:09 memory_monitor_summary.json
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas   1526164 Nov 23 17:09 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas    648199 Nov 23 17:09 log.47523659._000107.job.log.tgz.1
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas      7850 Nov 23 17:09 heartbeat.json
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas        95 Nov 23 17:09 pilot_heartbeat.json
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas        29 Nov 23 17:10 wrapper_checkpoint.txt
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 17:10 boinc_mmap_file
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas      5006 Nov 23 17:10 pilotlog.txt
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas   3830026 Nov 23 17:10 log.47523659._000107.job.log.1
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas       357 Nov 23 17:10 output.list
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas       620 Nov 23 17:10 runtime_log
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas   4495360 Nov 23 17:10 result.tar.gz
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 17:10 runtime_log.err
[2025-11-23 17:10:18] -rw------- 1 boincer umatlas       664 Nov 23 17:10 Qs3MDmFt5g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMCIKDmqrwfPn.diag
[2025-11-23 17:10:18] -rw-r--r-- 1 boincer umatlas     21473 Nov 23 17:10 stderr.txt
[2025-11-23 17:10:19] HITS file was successfully produced:
[2025-11-23 17:10:19] -rw------- 1 boincer umatlas 323468729 Nov 23 17:08 shared/HITS.pool.root.1
[2025-11-23 17:10:19]  *** Contents of shared directory: ***
[2025-11-23 17:10:19] total 615928
[2025-11-23 17:10:19] -rw-r--r-- 2 boincer umatlas 302121022 Nov 23 09:24 ATLAS.root_0
[2025-11-23 17:10:19] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 09:24 start_atlas.sh
[2025-11-23 17:10:19] -rw-r--r-- 2 boincer umatlas    589950 Nov 23 09:24 input.tar.gz
[2025-11-23 17:10:19] -rw------- 1 boincer umatlas 323468729 Nov 23 17:08 HITS.pool.root.1
[2025-11-23 17:10:19] -rw------- 1 boincer umatlas   4495360 Nov 23 17:10 result.tar.gz
17:10:20 (29921): run_atlas exited; CPU time 213435.641405
17:10:20 (29921): called boinc_finish(0)

</stderr_txt>
]]>

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