Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:47:45 (24098): wrapper (7.7.26015): starting
01:47:45 (24098): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 01:47:45] Arguments: --nthreads 8
[2025-11-26 01:47:45] Threads: 8
[2025-11-26 01:47:45] Checking for CVMFS
[2025-11-26 01:47:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:47:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:47:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:47:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:47:48] 2.11.2.0 27053 171475 134164 153303 2 85 16733456 25165825 4632 130560 12 58941066 99.898 31750265 2237 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 01:47:48] CVMFS is ok
[2025-11-26 01:47:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:47:48] Checking for apptainer binary...
[2025-11-26 01:47:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 01:47:48] Running /usr/bin/apptainer --version
[2025-11-26 01:47:48] apptainer version 1.3.2-1.el7
[2025-11-26 01:47:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:48:08] cg-vwn373.simple-grid.lan
[2025-11-26 01:48:08] apptainer works
[2025-11-26 01:48:08] Set ATHENA_PROC_NUMBER=8
[2025-11-26 01:48:08] Set ATHENA_CORE_NUMBER=8
[2025-11-26 01:48:08] Starting ATLAS job with PandaID=6895344132
[2025-11-26 01:48:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:38:29]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:38:29] 2025-11-27 00:37:20,827 | INFO     | monitor loop #5762: job 0:6895344132 is in state 'finished'
[2025-11-27 01:38:29] 2025-11-27 00:37:20,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:38:29] 2025-11-27 00:37:21,513 | INFO     | time since job start (85529s) is within the limit (172800.0s)
[2025-11-27 01:38:29] 2025-11-27 00:37:23,332 | INFO     | monitor loop #5763: job 0:6895344132 is in state 'finished'
[2025-11-27 01:38:29] 2025-11-27 00:37:23,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:38:29] 2025-11-27 00:37:23,525 | INFO     | time since job start (85531s) is within the limit (172800.0s)
[2025-11-27 01:38:29] 2025-11-27 00:37:24,691 | INFO     | PID=27848 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:38:29] 2025-11-27 00:37:24,692 | INFO     | .. there are 9 such processes running
[2025-11-27 01:38:29] 2025-11-27 00:37:25,692 | INFO     | time since job start (85533s) is within the limit (172800.0s)
[2025-11-27 01:38:29] 2025-11-27 00:37:25,837 | INFO     | monitor loop #5764: job 0:6895344132 is in state 'finished'
[2025-11-27 01:38:29] 2025-11-27 00:37:25,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:38:29] 2025-11-27 00:37:27,704 | INFO     | time since job start (85535s) is within the limit (172800.0s)
[2025-11-27 01:38:29] 2025-11-27 00:37:28,347 | INFO     | monitor loop #5765: job 0:6895344132 is in state 'finished'
[2025-11-27 01:38:29] 2025-11-27 00:37:28,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:38:29] 2025-11-27 00:37:29,710 | INFO     | time since job start (85537s) is within the limit (172800.0s)
[2025-11-27 01:38:29] 2025-11-27 00:37:30,469 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 01:38:29] 2025-11-27 00:37:30,470 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 01:38:29] 2025-11-27 00:37:30,471 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6895344132/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:38:29] 2025-11-27 00:37:30,472 | INFO     | extracted standard info from prmon json
[2025-11-27 01:38:29] 2025-11-27 00:37:30,472 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:38:29] 2025-11-27 00:37:30,472 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:38:29] 2025-11-27 00:37:30,497 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:38:29] 2025-11-27 00:37:30,499 | INFO     | sum of square deviations: 836363288233.6194
[2025-11-27 01:38:29] 2025-11-27 00:37:30,566 | INFO     | sum of deviations: 4077547638177.1753
[2025-11-27 01:38:29] 2025-11-27 00:37:30,566 | INFO     | mean x: 1764161283.608477
[2025-11-27 01:38:29] 2025-11-27 00:37:30,566 | INFO     | mean y: 2839855.8333333335
[2025-11-27 01:38:29] 2025-11-27 00:37:30,566 | INFO     | intersect: -8598029857.773739
[2025-11-27 01:38:29] 2025-11-27 00:37:30,568 | INFO     | chi2: 20.30312606443052
[2025-11-27 01:38:29] 2025-11-27 00:37:30,570 | INFO     | sum of square deviations: 827383534652.4543
[2025-11-27 01:38:29] 2025-11-27 00:37:30,622 | INFO     | sum of deviations: 4539148412727.066
[2025-11-27 01:38:29] 2025-11-27 00:37:30,622 | INFO     | mean x: 1764161131.112473
[2025-11-27 01:38:29] 2025-11-27 00:37:30,622 | INFO     | mean y: 2847694.2624369143
[2025-11-27 01:38:29] 2025-11-27 00:37:30,622 | INFO     | intersect: -9675601129.894634
[2025-11-27 01:38:29] 2025-11-27 00:37:30,624 | INFO     | chi2: 17.151651039670654
[2025-11-27 01:38:29] 2025-11-27 00:37:30,624 | INFO     | current chi2=17.151651039670654 (change=15.522117208743541 %)
[2025-11-27 01:38:29] 2025-11-27 00:37:30,624 | INFO     | right removable region: 1386
[2025-11-27 01:38:29] 2025-11-27 00:37:30,626 | INFO     | sum of square deviations: 827382593422.4537
[2025-11-27 01:38:29] 2025-11-27 00:37:30,693 | INFO     | sum of deviations: 3486877654124.3574
[2025-11-27 01:38:29] 2025-11-27 00:37:30,693 | INFO     | mean x: 1764161436.112473
[2025-11-27 01:38:29] 2025-11-27 00:37:30,693 | INFO     | mean y: 2849885.754145638
[2025-11-27 01:38:29] 2025-11-27 00:37:30,693 | INFO     | intersect: -7431939217.559348
[2025-11-27 01:38:29] 2025-11-27 00:37:30,695 | INFO     | chi2: 15.401713541622607
[2025-11-27 01:38:29] 2025-11-27 00:37:30,695 | INFO     | current chi2=15.401713541622607 (change=24.14117169569666 %)
[2025-11-27 01:38:29] 2025-11-27 00:37:30,695 | INFO     | left removable region: 10
[2025-11-27 01:38:29] 2025-11-27 00:37:30,697 | INFO     | sum of square deviations: 807852952053.7316
[2025-11-27 01:38:29] 2025-11-27 00:37:30,749 | INFO     | sum of deviations: 3559376369391.627
[2025-11-27 01:38:29] 2025-11-27 00:37:30,749 | INFO     | mean x: 1764161405.6213663
[2025-11-27 01:38:29] 2025-11-27 00:37:30,749 | INFO     | mean y: 2868022.699854651
[2025-11-27 01:38:29] 2025-11-27 00:37:30,749 | INFO     | intersect: -7769975293.646361
[2025-11-27 01:38:29] 2025-11-27 00:37:30,751 | INFO     | chi2: 8.15129584236487
[2025-11-27 01:38:29] 2025-11-27 00:37:30,751 | INFO     | current memory leak: 4.41 B/s (using 1376 data points, chi2=8.15)
[2025-11-27 01:38:29] 2025-11-27 00:37:30,752 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 01:38:29] 2025-11-27 00:37:30,752 | INFO     | ..............................
[2025-11-27 01:38:29] 2025-11-27 00:37:30,753 | INFO     | . Timing measurements:
[2025-11-27 01:38:29] 2025-11-27 00:37:30,753 | INFO     | . get job = 0 s
[2025-11-27 01:38:29] 2025-11-27 00:37:30,753 | INFO     | . initial setup = 12 s
[2025-11-27 01:38:29] 2025-11-27 00:37:30,753 | INFO     | . payload setup = 163 s
[2025-11-27 01:38:29] 2025-11-27 00:37:30,753 | INFO     | . stage-in = 0 s
[2025-11-27 01:38:29] 2025-11-27 00:37:30,753 | INFO     | . payload execution = 85053 s
[2025-11-27 01:38:29] 2025-11-27 00:37:30,753 | INFO     | . stage-out = 3 s
[2025-11-27 01:38:29] 2025-11-27 00:37:30,753 | INFO     | . log creation = 1 s
[2025-11-27 01:38:29] 2025-11-27 00:37:30,753 | INFO     | ..............................
[2025-11-27 01:38:29] 2025-11-27 00:37:30,924 | INFO     | 
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | job summary report
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | --------------------------------------------------
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | PanDA job id: 6895344132
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | task id: 47556149
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | errors: (none)
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | pilot state: finished 
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | transexitcode: 0
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | exeerrorcode: 0
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | exeerrordiag: 
[2025-11-27 01:38:29] 2025-11-27 00:37:30,925 | INFO     | exitcode: 0
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | exitmsg: OK
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | cpuconsumptiontime: 320721 s
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | nevents: 1000
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | neventsw: 0
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | pid: 2005
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | pgrp: 2005
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | corecount: 8
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | event service: False
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | sizes: {0: 2284085, 1: 2284340, 12: 2284340, 23: 2284368, 34: 2284396, 44: 2284424, 55: 2284580, 66: 2284608, 77: 2284636, 87: 2284692, 98: 2284720, 104: 2285290, 
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | --------------------------------------------------
[2025-11-27 01:38:29] 2025-11-27 00:37:30,926 | INFO     | 
[2025-11-27 01:38:29] 2025-11-27 00:37:30,927 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-11-27 01:38:29] 2025-11-27 00:37:31,409 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,409 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,409 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,409 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,409 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,411 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:38:29] 2025-11-27 00:37:31,411 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,411 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:38:29] 2025-11-27 00:37:31,411 | INFO     | job 6895344132 has completed (purged errors)
[2025-11-27 01:38:29] 2025-11-27 00:37:31,411 | INFO     | overall cleanup function is called
[2025-11-27 01:38:29] 2025-11-27 00:37:32,433 | INFO     | --- collectZombieJob: --- 10, [2005]
[2025-11-27 01:38:29] 2025-11-27 00:37:32,434 | INFO     | zombie collector waiting for pid 2005
[2025-11-27 01:38:29] 2025-11-27 00:37:32,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:38:29] 2025-11-27 00:37:32,434 | INFO     | collected zombie processes
[2025-11-27 01:38:29] 2025-11-27 00:37:32,434 | INFO     | will attempt to kill all subprocesses of pid=2005
[2025-11-27 01:38:29] 2025-11-27 00:37:32,555 | INFO     | process IDs to be killed: [2005] (in reverse order)
[2025-11-27 01:38:29] 2025-11-27 00:37:33,128 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:38:29] 2025-11-27 00:37:33,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:38:29] 2025-11-27 00:37:33,132 | INFO     | did not find any defunct processes belonging to 2005
[2025-11-27 01:38:29] 2025-11-27 00:37:33,134 | INFO     | did not find any defunct processes belonging to 2005
[2025-11-27 01:38:29] 2025-11-27 00:37:33,202 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:38:29] 2025-11-27 00:37:33,202 | INFO     | ready for new job
[2025-11-27 01:38:29] 2025-11-27 00:37:33,202 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:38:29] 2025-11-27 00:37:33,207 | INFO     | ***************************************
[2025-11-27 01:38:29] 2025-11-27 00:37:33,207 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:38:29] 2025-11-27 00:37:33,207 | INFO     | ***************************************
[2025-11-27 01:38:29] 2025-11-27 00:37:33,207 | INFO     | 
[2025-11-27 01:38:29] 2025-11-27 00:37:33,208 | INFO     | pilot is running in a VM
[2025-11-27 01:38:29] 2025-11-27 00:37:33,208 | INFO     | architecture information:
[2025-11-27 01:38:29] 2025-11-27 00:37:33,218 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:38:29] 2025-11-27 00:37:33,461 | INFO     | cat /etc/os-release:
[2025-11-27 01:38:29] NAME="CentOS Linux"
[2025-11-27 01:38:29] VERSION="7 (Core)"
[2025-11-27 01:38:29] ID="centos"
[2025-11-27 01:38:29] ID_LIKE="rhel fedora"
[2025-11-27 01:38:29] VERSION_ID="7"
[2025-11-27 01:38:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:38:29] ANSI_COLOR="0;31"
[2025-11-27 01:38:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:38:29] HOME_URL="https://www.centos.org/"
[2025-11-27 01:38:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:38:29] 
[2025-11-27 01:38:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:38:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:38:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:38:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:38:29] 
[2025-11-27 01:38:29] 2025-11-27 00:37:33,461 | INFO     | ***************************************
[2025-11-27 01:38:29] 2025-11-27 00:37:33,965 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-11-27 01:38:29] 2025-11-27 00:37:34,088 | INFO     | sufficient remaining disk space (495757295616 B)
[2025-11-27 01:38:29] 2025-11-27 00:37:34,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:38:29] 2025-11-27 00:37:34,089 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:38:29] 2025-11-27 00:37:34,089 | INFO     | update_server=False
[2025-11-27 01:38:29] 2025-11-27 00:37:34,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:38:29] 2025-11-27 00:37:34,158 | INFO     | all payload control threads have been joined
[2025-11-27 01:38:29] 2025-11-27 00:37:34,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:38:29] 2025-11-27 00:37:34,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:38:29] 2025-11-27 00:37:34,379 | INFO     | aborting loop
[2025-11-27 01:38:29] 2025-11-27 00:37:35,020 | INFO     | all data control threads have been joined
[2025-11-27 01:38:29] 2025-11-27 00:37:35,095 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:35,147 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:35,164 | INFO     | [payload] control thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:35,337 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:35,384 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:35,429 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:35,444 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:35,570 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:35,654 | INFO     | all job control threads have been joined
[2025-11-27 01:38:29] 2025-11-27 00:37:35,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:38:29] 2025-11-27 00:37:36,026 | INFO     | [data] control thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:36,171 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:36,220 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:36,389 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:36,557 | INFO     | [job] validate thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:36,660 | INFO     | [job] control thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:36,885 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:36,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:38:29] 2025-11-27 00:37:41,004 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:38:29] 2025-11-27 00:37:44,319 [wrapper] supervise_pilot (15 min periods counter: 96)
[2025-11-27 01:38:29] 2025-11-27 00:38:02,907 | INFO     | PID=27848 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:38:29] 2025-11-27 00:38:02,907 | INFO     | .. there are 9 such processes running
[2025-11-27 01:38:29] 2025-11-27 00:38:02,908 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:38:29] 2025-11-27 00:38:02,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:38:29] 2025-11-27 00:38:02,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:38:29] 2025-11-27 00:38:20,211 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:38:29] 2025-11-27 00:38:21,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606805006144)>', '<ExcThread(monitor, started 140606122735360)>']
[2025-11-27 01:38:29] 2025-11-27 00:38:22,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:38:29] 2025-11-27 00:38:22,020 | INFO     | [monitor] control thread has ended
[2025-11-27 01:38:29] 2025-11-27 00:38:26,220 | INFO     | all workflow threads have been joined
[2025-11-27 01:38:29] 2025-11-27 00:38:26,221 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:38:29] 2025-11-27 00:38:26,221 | INFO     | traces error code: 0
[2025-11-27 01:38:29] 2025-11-27 00:38:26,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:38:29] 2025-11-27 00:38:26,382 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:38:29] 2025-11-27 00:38:26,386 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:38:29] 2025-11-27 00:38:26,399 [wrapper] pilotpid: 27848
[2025-11-27 01:38:29] 2025-11-27 00:38:26,448 [wrapper] Pilot exit status: 0
[2025-11-27 01:38:29] 2025-11-27 00:38:26,866 [wrapper] pandaids: 6895344132
[2025-11-27 01:38:29] 2025-11-27 00:38:27,311 [wrapper] cleanup supervisor_pilot  3664 27849
[2025-11-27 01:38:29] 2025-11-27 00:38:27,393 [wrapper] Test setup, not cleaning
[2025-11-27 01:38:29] 2025-11-27 00:38:27,474 [wrapper] apfmon messages muted
[2025-11-27 01:38:29] 2025-11-27 00:38:27,562 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:38:29] 2025-11-27 00:38:27,670 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:38:29]  *** Error codes and diagnostics ***
[2025-11-27 01:38:29]     "exeErrorCode": 0,
[2025-11-27 01:38:29]     "exeErrorDiag": "",
[2025-11-27 01:38:29]     "pilotErrorCode": 0,
[2025-11-27 01:38:29]     "pilotErrorDiag": "",
[2025-11-27 01:38:29]  *** Listing of results directory ***
[2025-11-27 01:38:29] total 1323612
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc    576529 Nov 22 17:22 pilot3.tar.gz
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc      5112 Nov 22 17:35 queuedata.json
[2025-11-27 01:38:29] -rwx------. 1 boinc boinc     36292 Nov 22 17:37 runpilot2-wrapper.sh
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc       100 Nov 26 01:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:38:29] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 01:47 run_atlas
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc       105 Nov 26 01:47 job.xml
[2025-11-27 01:38:29] -rw-r--r--. 2 boinc boinc 409708603 Nov 26 01:47 EVNT.47483658._001101.pool.root.1
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc      6393 Nov 26 01:47 init_data.xml
[2025-11-27 01:38:29] -rw-r--r--. 2 boinc boinc     15847 Nov 26 01:47 start_atlas.sh
[2025-11-27 01:38:29] drwxrwx--x. 2 boinc boinc        68 Nov 26 01:47 shared
[2025-11-27 01:38:29] -rw-r--r--. 2 boinc boinc    590104 Nov 26 01:47 input.tar.gz
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc         0 Nov 26 01:47 boinc_lockfile
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc      2783 Nov 26 01:48 pandaJob.out
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc    991877 Nov 26 01:51 agis_schedconf.cvmfs.json
[2025-11-27 01:38:29] drwx------. 5 boinc boinc      4096 Nov 26 01:51 pilot3
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc       533 Nov 27 01:17 boinc_task_state.xml
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc 913924489 Nov 27 01:34 HITS.47556149._000876.pool.root.1
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc      1031 Nov 27 01:35 memory_monitor_summary.json
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc   1516240 Nov 27 01:35 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc   2483277 Nov 27 01:35 log.47556149._000876.job.log.tgz.1
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc      7944 Nov 27 01:37 heartbeat.json
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc        95 Nov 27 01:38 pilot_heartbeat.json
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc      8192 Nov 27 01:38 boinc_mmap_file
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc        29 Nov 27 01:38 wrapper_checkpoint.txt
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc      4885 Nov 27 01:38 pilotlog.txt
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc  11439065 Nov 27 01:38 log.47556149._000876.job.log.1
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc       353 Nov 27 01:38 output.list
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc       620 Nov 27 01:38 runtime_log
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc  13936640 Nov 27 01:38 result.tar.gz
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc      8833 Nov 27 01:38 runtime_log.err
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc       662 Nov 27 01:38 61wLDmIn5g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3GKKDmd10OLn.diag
[2025-11-27 01:38:29] -rw-r--r--. 1 boinc boinc     21476 Nov 27 01:38 stderr.txt
[2025-11-27 01:38:29] HITS file was successfully produced:
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc 913924489 Nov 27 01:34 shared/HITS.pool.root.1
[2025-11-27 01:38:29]  *** Contents of shared directory: ***
[2025-11-27 01:38:29] total 1306824
[2025-11-27 01:38:29] -rw-r--r--. 2 boinc boinc 409708603 Nov 26 01:47 ATLAS.root_0
[2025-11-27 01:38:29] -rw-r--r--. 2 boinc boinc     15847 Nov 26 01:47 start_atlas.sh
[2025-11-27 01:38:29] -rw-r--r--. 2 boinc boinc    590104 Nov 26 01:47 input.tar.gz
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc 913924489 Nov 27 01:34 HITS.pool.root.1
[2025-11-27 01:38:29] -rw-------. 1 boinc boinc  13936640 Nov 27 01:38 result.tar.gz
01:38:31 (24098): run_atlas exited; CPU time 321318.774859
01:38:31 (24098): called boinc_finish(0)

</stderr_txt>
]]>

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