Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:55:56 (454857): wrapper (7.7.26015): starting
04:55:56 (454857): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 04:55:56] Arguments: --nthreads 4
[2025-11-26 04:55:56] Threads: 4
[2025-11-26 04:55:56] Checking for CVMFS
[2025-11-26 04:55:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:55:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:55:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:55:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:55:56] 2.9.2.0 3057 2918 82652 153307 1 81 35570732 36864001 651 130560 0 1281312 99.982 108357 16309 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 04:55:56] CVMFS is ok
[2025-11-26 04:55:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 04:55:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 04:55:56] Further information can be found at the LHC@home message board.
[2025-11-26 04:55:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:55:56] Checking for apptainer binary...
[2025-11-26 04:55:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:55:56] Running /usr/bin/apptainer --version
[2025-11-26 04:55:56] apptainer version 1.4.1-1.1
[2025-11-26 04:55:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:55:57] thA383a
[2025-11-26 04:55:57] apptainer works
[2025-11-26 04:55:57] Set ATHENA_PROC_NUMBER=4
[2025-11-26 04:55:57] Set ATHENA_CORE_NUMBER=4
[2025-11-26 04:55:57] Starting ATLAS job with PandaID=6895343968
[2025-11-26 04:55:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:42:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:42:43] 2025-11-26 10:42:12,480 | INFO     | 
[2025-11-26 11:42:43] 2025-11-26 10:42:12,481 | INFO     | architecture information:
[2025-11-26 11:42:43] 2025-11-26 10:42:12,481 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:42:43] 2025-11-26 10:42:12,496 | INFO     | cat /etc/os-release:
[2025-11-26 11:42:43] NAME="CentOS Linux"
[2025-11-26 11:42:43] VERSION="7 (Core)"
[2025-11-26 11:42:43] ID="centos"
[2025-11-26 11:42:43] ID_LIKE="rhel fedora"
[2025-11-26 11:42:43] VERSION_ID="7"
[2025-11-26 11:42:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:42:43] ANSI_COLOR="0;31"
[2025-11-26 11:42:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:42:43] HOME_URL="https://www.centos.org/"
[2025-11-26 11:42:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:42:43] 
[2025-11-26 11:42:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:42:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:42:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:42:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:42:43] 
[2025-11-26 11:42:43] 2025-11-26 10:42:12,496 | INFO     | ***************************************
[2025-11-26 11:42:43] 2025-11-26 10:42:12,999 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 11:42:43] 2025-11-26 10:42:13,016 | INFO     | sufficient remaining disk space (220246048768 B)
[2025-11-26 11:42:43] 2025-11-26 10:42:13,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:42:43] 2025-11-26 10:42:13,016 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:42:43] 2025-11-26 10:42:13,016 | INFO     | update_server=False
[2025-11-26 11:42:43] 2025-11-26 10:42:13,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:42:43] 2025-11-26 10:42:13,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:42:43] 2025-11-26 10:42:13,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:42:43] 2025-11-26 10:42:13,017 | INFO     | aborting loop
[2025-11-26 11:42:43] 2025-11-26 10:42:13,201 | INFO     | all data control threads have been joined
[2025-11-26 11:42:43] 2025-11-26 10:42:13,545 | INFO     | all job control threads have been joined
[2025-11-26 11:42:43] 2025-11-26 10:42:13,754 | INFO     | all payload control threads have been joined
[2025-11-26 11:42:43] 2025-11-26 10:42:14,017 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,022 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,022 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,096 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,178 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,207 | INFO     | [data] control thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,341 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,396 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:42:43] 2025-11-26 10:42:14,551 | INFO     | [job] control thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,693 | INFO     | [job] validate thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,759 | INFO     | [payload] control thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,793 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:14,946 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:15,103 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:15,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:42:43] 2025-11-26 10:42:16,497 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:19,348 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:42:43] 2025-11-26 10:42:35,434 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:42:43] 2025-11-26 10:42:36,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479308154688)>', '<ExcThread(monitor, started 140478414567168)>']
[2025-11-26 11:42:43] 2025-11-26 10:42:41,450 | INFO     | all workflow threads have been joined
[2025-11-26 11:42:43] 2025-11-26 10:42:41,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:42:43] 2025-11-26 10:42:41,450 | INFO     | traces error code: 0
[2025-11-26 11:42:43] 2025-11-26 10:42:41,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:42:43] 2025-11-26 10:42:43,480 | INFO     | PID=458636 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 11:42:43] 2025-11-26 10:42:43,480 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:42:43] 2025-11-26 10:42:43,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:42:43] 2025-11-26 10:42:43,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:42:43] 2025-11-26 10:42:43,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:42:43] 2025-11-26 10:42:43,480 | INFO     | [monitor] control thread has ended
[2025-11-26 11:42:43] 2025-11-26 10:42:43,557 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:42:43] 2025-11-26 10:42:43,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:42:43] 2025-11-26 10:42:43,565 [wrapper] pilotpid: 458636
[2025-11-26 11:42:43] 2025-11-26 10:42:43,569 [wrapper] Pilot exit status: 0
[2025-11-26 11:42:43] 2025-11-26 10:42:43,581 [wrapper] pandaids: 6895343968
[2025-11-26 11:42:43] 2025-11-26 10:42:43,604 [wrapper] cleanup supervisor_pilot  512520 458637
[2025-11-26 11:42:43] 2025-11-26 10:42:43,608 [wrapper] Test setup, not cleaning
[2025-11-26 11:42:43] 2025-11-26 10:42:43,612 [wrapper] apfmon messages muted
[2025-11-26 11:42:43] 2025-11-26 10:42:43,616 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:42:43] 2025-11-26 10:42:43,620 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:42:43]  *** Error codes and diagnostics ***
[2025-11-26 11:42:43]     "exeErrorCode": 0,
[2025-11-26 11:42:43]     "exeErrorDiag": "",
[2025-11-26 11:42:43]     "pilotErrorCode": 0,
[2025-11-26 11:42:43]     "pilotErrorDiag": "",
[2025-11-26 11:42:43]  *** Listing of results directory ***
[2025-11-26 11:42:43] total 1299244
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc    576529 Nov 22 16:48 pilot3.tar.gz
[2025-11-26 11:42:43] -rwx------ 1 boinc boinc     36292 Nov 22 17:17 runpilot2-wrapper.sh
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc      5112 Nov 22 17:17 queuedata.json
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc       100 Nov 26 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:42:43] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 04:55 run_atlas
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc       105 Nov 26 04:55 job.xml
[2025-11-26 11:42:43] -rw-r--r-- 2 boinc boinc 408706151 Nov 26 04:55 EVNT.47483658._000427.pool.root.1
[2025-11-26 11:42:43] drwxrwx--x 2 boinc boinc      4096 Nov 26 04:55 shared
[2025-11-26 11:42:43] -rw-r--r-- 2 boinc boinc    590096 Nov 26 04:55 input.tar.gz
[2025-11-26 11:42:43] -rw-r--r-- 2 boinc boinc     15847 Nov 26 04:55 start_atlas.sh
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc         0 Nov 26 04:55 boinc_setup_complete
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc      6379 Nov 26 04:55 init_data.xml
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc         0 Nov 26 04:55 boinc_lockfile
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc      2784 Nov 26 04:55 pandaJob.out
[2025-11-26 11:42:43] -rw------- 1 boinc boinc    991877 Nov 26 04:56 agis_schedconf.cvmfs.json
[2025-11-26 11:42:43] drwx------ 5 boinc boinc      4096 Nov 26 04:56 pilot3
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc       531 Nov 26 11:38 boinc_task_state.xml
[2025-11-26 11:42:43] -rw------- 1 boinc boinc 908440920 Nov 26 11:41 HITS.47556137._004222.pool.root.1
[2025-11-26 11:42:43] -rw------- 1 boinc boinc      1032 Nov 26 11:41 memory_monitor_summary.json
[2025-11-26 11:42:43] -rw------- 1 boinc boinc   1516240 Nov 26 11:42 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:42:43] -rw------- 1 boinc boinc   1253130 Nov 26 11:42 log.47556137._004222.job.log.tgz.1
[2025-11-26 11:42:43] -rw------- 1 boinc boinc      8572 Nov 26 11:42 heartbeat.json
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc      8192 Nov 26 11:42 boinc_mmap_file
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc        28 Nov 26 11:42 wrapper_checkpoint.txt
[2025-11-26 11:42:43] -rw------- 1 boinc boinc       746 Nov 26 11:42 pilotlog.txt
[2025-11-26 11:42:43] -rw------- 1 boinc boinc        95 Nov 26 11:42 pilot_heartbeat.json
[2025-11-26 11:42:43] -rw------- 1 boinc boinc   3434088 Nov 26 11:42 log.47556137._004222.job.log.1
[2025-11-26 11:42:43] -rw------- 1 boinc boinc       353 Nov 26 11:42 output.list
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc       620 Nov 26 11:42 runtime_log
[2025-11-26 11:42:43] -rw------- 1 boinc boinc   4710400 Nov 26 11:42 result.tar.gz
[2025-11-26 11:42:43] -rw------- 1 boinc boinc       666 Nov 26 11:42 uxTNDm2T5g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVBIKDmoiwHan.diag
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc      8903 Nov 26 11:42 runtime_log.err
[2025-11-26 11:42:43] -rw-r--r-- 1 boinc boinc      9027 Nov 26 11:42 stderr.txt
[2025-11-26 11:42:43] HITS file was successfully produced:
[2025-11-26 11:42:43] -rw------- 1 boinc boinc 908440920 Nov 26 11:41 shared/HITS.pool.root.1
[2025-11-26 11:42:43]  *** Contents of shared directory: ***
[2025-11-26 11:42:43] total 1291484
[2025-11-26 11:42:43] -rw-r--r-- 2 boinc boinc 408706151 Nov 26 04:55 ATLAS.root_0
[2025-11-26 11:42:43] -rw-r--r-- 2 boinc boinc    590096 Nov 26 04:55 input.tar.gz
[2025-11-26 11:42:43] -rw-r--r-- 2 boinc boinc     15847 Nov 26 04:55 start_atlas.sh
[2025-11-26 11:42:43] -rw------- 1 boinc boinc 908440920 Nov 26 11:41 HITS.pool.root.1
[2025-11-26 11:42:43] -rw------- 1 boinc boinc   4710400 Nov 26 11:42 result.tar.gz
11:42:45 (454857): run_atlas exited; CPU time 95339.047170
11:42:45 (454857): called boinc_finish(0)

</stderr_txt>
]]>

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