Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
17:41:05 (414897): wrapper (7.7.26015): starting
17:41:05 (414897): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 17:41:05] Arguments: --nthreads 12
[2025-11-23 17:41:05] Threads: 12
[2025-11-23 17:41:05] Checking for CVMFS
[2025-11-23 17:41:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 17:41:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 17:41:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 17:41:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 17:41:06] 2.13.0.0 371123 235 58124 153215 0 81 4057697 6144001 0 130560 0 145935 99.974 12053 1461 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-23 17:41:06] CVMFS is ok
[2025-11-23 17:41:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 17:41:06] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-23 17:41:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-23 17:41:06] Further information can be found at the LHC@home message board.
[2025-11-23 17:41:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 17:41:06] Checking for apptainer binary...
[2025-11-23 17:41:06] apptainer is not installed, using version from CVMFS
[2025-11-23 17:41:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 17:41:06] Debian-bookworm-latest-amd64-base
[2025-11-23 17:41:06] apptainer works
[2025-11-23 17:41:06] Set ATHENA_PROC_NUMBER=12
[2025-11-23 17:41:06] Set ATHENA_CORE_NUMBER=12
[2025-11-23 17:41:06] Starting ATLAS job with PandaID=6895343280
[2025-11-23 17:41:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 21:41:41]  *** The last 200 lines of the pilot log: ***
[2025-11-23 21:41:41] 2025-11-23 20:41:07,066 | INFO     | number of running child processes to parent process 425470: 1
[2025-11-23 21:41:41] 2025-11-23 20:41:07,066 | INFO     | maximum number of monitored processes: 20
[2025-11-23 21:41:41] 2025-11-23 20:41:08,862 | INFO     | time since job start (14397s) is within the limit (172800.0s)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,071 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 21:41:41] 2025-11-23 20:41:09,073 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3804.4826875
[2025-11-23 21:41:41] 2025-11-23 20:41:09,074 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895343280/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,074 | INFO     | extracted standard info from prmon json
[2025-11-23 21:41:41] 2025-11-23 20:41:09,074 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 21:41:41] 2025-11-23 20:41:09,074 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 21:41:41] 2025-11-23 20:41:09,076 | INFO     | fitting pss+swap vs Time
[2025-11-23 21:41:41] 2025-11-23 20:41:09,076 | INFO     | sum of square deviations: 4075728976.8474545
[2025-11-23 21:41:41] 2025-11-23 20:41:09,077 | INFO     | sum of deviations: 165745299074.52533
[2025-11-23 21:41:41] 2025-11-23 20:41:09,077 | INFO     | mean x: 1763923257.5254238
[2025-11-23 21:41:41] 2025-11-23 20:41:09,077 | INFO     | mean y: 3605689.995762712
[2025-11-23 21:41:41] 2025-11-23 20:41:09,077 | INFO     | intersect: -71728835187.17024
[2025-11-23 21:41:41] 2025-11-23 20:41:09,077 | INFO     | chi2: 3.6890869568760056
[2025-11-23 21:41:41] 2025-11-23 20:41:09,077 | INFO     | sum of square deviations: 3822126051.84417
[2025-11-23 21:41:41] 2025-11-23 20:41:09,078 | INFO     | sum of deviations: 234332958609.68842
[2025-11-23 21:41:41] 2025-11-23 20:41:09,078 | INFO     | mean x: 1763923105.025974
[2025-11-23 21:41:41] 2025-11-23 20:41:09,078 | INFO     | mean y: 3646745.7186147184
[2025-11-23 21:41:41] 2025-11-23 20:41:09,078 | INFO     | intersect: -108141745204.73424
[2025-11-23 21:41:41] 2025-11-23 20:41:09,078 | INFO     | chi2: 1.8156330650494639
[2025-11-23 21:41:41] 2025-11-23 20:41:09,078 | INFO     | current chi2=1.8156330650494639 (change=50.78367394768652 %)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,079 | INFO     | sum of square deviations: 3579267514.3407073
[2025-11-23 21:41:41] 2025-11-23 20:41:09,079 | INFO     | sum of deviations: 222783710531.9557
[2025-11-23 21:41:41] 2025-11-23 20:41:09,079 | INFO     | mean x: 1763922952.5265486
[2025-11-23 21:41:41] 2025-11-23 20:41:09,079 | INFO     | mean y: 3639493.8407079647
[2025-11-23 21:41:41] 2025-11-23 20:41:09,079 | INFO     | intersect: -109787902737.03722
[2025-11-23 21:41:41] 2025-11-23 20:41:09,079 | INFO     | chi2: 1.8158743653244611
[2025-11-23 21:41:41] 2025-11-23 20:41:09,079 | INFO     | current chi2=1.8158743653244611 (change=-0.01329014543974904 %)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,079 | INFO     | right removable region: 225
[2025-11-23 21:41:41] 2025-11-23 20:41:09,080 | INFO     | sum of square deviations: 3822122391.84417
[2025-11-23 21:41:41] 2025-11-23 20:41:09,080 | INFO     | sum of deviations: 98047779224.92195
[2025-11-23 21:41:41] 2025-11-23 20:41:09,080 | INFO     | mean x: 1763923410.025974
[2025-11-23 21:41:41] 2025-11-23 20:41:09,080 | INFO     | mean y: 3646111.3463203465
[2025-11-23 21:41:41] 2025-11-23 20:41:09,080 | INFO     | intersect: -45245761245.39993
[2025-11-23 21:41:41] 2025-11-23 20:41:09,080 | INFO     | chi2: 1.9390666418861437
[2025-11-23 21:41:41] 2025-11-23 20:41:09,081 | INFO     | current chi2=1.9390666418861437 (change=47.437762661789215 %)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,081 | INFO     | sum of square deviations: 3579260194.3407073
[2025-11-23 21:41:41] 2025-11-23 20:41:09,081 | INFO     | sum of deviations: 84925357798.23453
[2025-11-23 21:41:41] 2025-11-23 20:41:09,081 | INFO     | mean x: 1763923562.5265486
[2025-11-23 21:41:41] 2025-11-23 20:41:09,081 | INFO     | mean y: 3654338.5442477874
[2025-11-23 21:41:41] 2025-11-23 20:41:09,081 | INFO     | intersect: -41849083809.17705
[2025-11-23 21:41:41] 2025-11-23 20:41:09,082 | INFO     | chi2: 1.9300785211794351
[2025-11-23 21:41:41] 2025-11-23 20:41:09,082 | INFO     | current chi2=1.9300785211794351 (change=0.4635282002461667 %)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,082 | INFO     | left removable region: 20
[2025-11-23 21:41:41] 2025-11-23 20:41:09,082 | INFO     | sum of square deviations: 2671327257.8243876
[2025-11-23 21:41:41] 2025-11-23 20:41:09,082 | INFO     | sum of deviations: 123185669507.22934
[2025-11-23 21:41:41] 2025-11-23 20:41:09,082 | INFO     | mean x: 1763923532.0292683
[2025-11-23 21:41:41] 2025-11-23 20:41:09,082 | INFO     | mean y: 3704152.795121951
[2025-11-23 21:41:41] 2025-11-23 20:41:09,082 | INFO     | intersect: -81337921294.30565
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | chi2: 0.021759820161294168
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | current memory leak: 46.11 B/s (using 205 data points, chi2=0.02)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | could have reported an average CPU frequency of 3893 MHz (11 samples)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | ..............................
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | . Timing measurements:
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | . get job = 0 s
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | . initial setup = 1 s
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | . payload setup = 2 s
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | . stage-in = 0 s
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | . payload execution = 14370 s
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | . stage-out = 1 s
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | . log creation = 0 s
[2025-11-23 21:41:41] 2025-11-23 20:41:09,083 | INFO     | ..............................
[2025-11-23 21:41:41] 2025-11-23 20:41:09,136 | INFO     | 
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | job summary report
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | --------------------------------------------------
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | PanDA job id: 6895343280
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | task id: 47556137
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | errors: (none)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | pilot state: finished 
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | transexitcode: 0
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | exeerrorcode: 0
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | exeerrordiag: 
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | exitcode: 0
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | exitmsg: OK
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | cpuconsumptiontime: 165883 s
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | nevents: 1000
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | neventsw: 0
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | pid: 425470
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | pgrp: 425470
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | corecount: 12
[2025-11-23 21:41:41] 2025-11-23 20:41:09,137 | INFO     | event service: False
[2025-11-23 21:41:41] 2025-11-23 20:41:09,138 | INFO     | sizes: {0: 2298763, 2: 2299025, 11: 2299053, 14376: 2330978, 14379: 2339986, 14381: 2340042, 14385: 2340416}
[2025-11-23 21:41:41] 2025-11-23 20:41:09,138 | INFO     | --------------------------------------------------
[2025-11-23 21:41:41] 2025-11-23 20:41:09,138 | INFO     | 
[2025-11-23 21:41:41] 2025-11-23 20:41:09,138 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-23 21:41:41] 2025-11-23 20:41:09,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | job 6895343280 has completed (purged errors)
[2025-11-23 21:41:41] 2025-11-23 20:41:09,153 | INFO     | overall cleanup function is called
[2025-11-23 21:41:41] 2025-11-23 20:41:10,166 | INFO     | --- collectZombieJob: --- 10, [425470]
[2025-11-23 21:41:41] 2025-11-23 20:41:10,166 | INFO     | zombie collector waiting for pid 425470
[2025-11-23 21:41:41] 2025-11-23 20:41:10,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 21:41:41] 2025-11-23 20:41:10,166 | INFO     | collected zombie processes
[2025-11-23 21:41:41] 2025-11-23 20:41:10,166 | INFO     | will attempt to kill all subprocesses of pid=425470
[2025-11-23 21:41:41] 2025-11-23 20:41:10,212 | INFO     | process IDs to be killed: [425470] (in reverse order)
[2025-11-23 21:41:41] 2025-11-23 20:41:10,241 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 21:41:41] 2025-11-23 20:41:10,241 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 21:41:41] 2025-11-23 20:41:10,242 | INFO     | did not find any defunct processes belonging to 425470
[2025-11-23 21:41:41] 2025-11-23 20:41:10,244 | INFO     | did not find any defunct processes belonging to 425470
[2025-11-23 21:41:41] 2025-11-23 20:41:10,244 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 21:41:41] 2025-11-23 20:41:10,244 | INFO     | ready for new job
[2025-11-23 21:41:41] 2025-11-23 20:41:10,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 21:41:41] 2025-11-23 20:41:10,246 | INFO     | ***************************************
[2025-11-23 21:41:41] 2025-11-23 20:41:10,246 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 21:41:41] 2025-11-23 20:41:10,246 | INFO     | ***************************************
[2025-11-23 21:41:41] 2025-11-23 20:41:10,246 | INFO     | 
[2025-11-23 21:41:41] 2025-11-23 20:41:10,246 | INFO     | architecture information:
[2025-11-23 21:41:41] 2025-11-23 20:41:10,246 | INFO     | executing command: cat /etc/os-release
[2025-11-23 21:41:41] 2025-11-23 20:41:10,255 | INFO     | cat /etc/os-release:
[2025-11-23 21:41:41] NAME="CentOS Linux"
[2025-11-23 21:41:41] VERSION="7 (Core)"
[2025-11-23 21:41:41] ID="centos"
[2025-11-23 21:41:41] ID_LIKE="rhel fedora"
[2025-11-23 21:41:41] VERSION_ID="7"
[2025-11-23 21:41:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 21:41:41] ANSI_COLOR="0;31"
[2025-11-23 21:41:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 21:41:41] HOME_URL="https://www.centos.org/"
[2025-11-23 21:41:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 21:41:41] 
[2025-11-23 21:41:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 21:41:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 21:41:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 21:41:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 21:41:41] 
[2025-11-23 21:41:41] 2025-11-23 20:41:10,255 | INFO     | ***************************************
[2025-11-23 21:41:41] 2025-11-23 20:41:10,758 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-23 21:41:41] 2025-11-23 20:41:10,771 | INFO     | sufficient remaining disk space (760342380544 B)
[2025-11-23 21:41:41] 2025-11-23 20:41:10,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 21:41:41] 2025-11-23 20:41:10,771 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 21:41:41] 2025-11-23 20:41:10,771 | INFO     | update_server=False
[2025-11-23 21:41:41] 2025-11-23 20:41:10,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 21:41:41] 2025-11-23 20:41:10,771 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 21:41:41] 2025-11-23 20:41:10,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:41:41] 2025-11-23 20:41:10,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:41:41] 2025-11-23 20:41:10,772 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 21:41:41] 2025-11-23 20:41:10,772 | INFO     | aborting loop
[2025-11-23 21:41:41] 2025-11-23 20:41:10,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 21:41:41] 2025-11-23 20:41:10,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 21:41:41] 2025-11-23 20:41:10,908 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-11-23 21:41:41] 2025-11-23 20:41:11,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 21:41:41] 2025-11-23 20:41:11,389 | INFO     | all payload control threads have been joined
[2025-11-23 21:41:41] 2025-11-23 20:41:11,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 21:41:41] 2025-11-23 20:41:11,430 | INFO     | all job control threads have been joined
[2025-11-23 21:41:41] 2025-11-23 20:41:11,524 | INFO     | all data control threads have been joined
[2025-11-23 21:41:41] 2025-11-23 20:41:11,777 | INFO     | [job] retrieve thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:11,777 | INFO     | [job] queue monitor thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:11,777 | INFO     | [job] job monitor thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:12,033 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:12,169 | INFO     | [payload] failed_post thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:12,395 | INFO     | [payload] control thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:12,435 | INFO     | [job] control thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:12,453 | INFO     | [data] copytool_in thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:12,529 | INFO     | [data] control thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:12,545 | INFO     | [job] validate thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:12,689 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:12,804 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:12,811 | INFO     | [payload] validate_post thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:13,013 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:13,384 | INFO     | [data] copytool_out thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:15,418 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 21:41:41] 2025-11-23 20:41:35,193 | INFO     | [monitor] cgroup control has ended
[2025-11-23 21:41:41] 2025-11-23 20:41:36,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212507166528)>', '<ExcThread(monitor, started 140212118202112)>']
[2025-11-23 21:41:41] 2025-11-23 20:41:36,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 21:41:41] 2025-11-23 20:41:36,897 | INFO     | [monitor] control thread has ended
[2025-11-23 21:41:41] 2025-11-23 20:41:41,201 | INFO     | all workflow threads have been joined
[2025-11-23 21:41:41] 2025-11-23 20:41:41,201 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 21:41:41] 2025-11-23 20:41:41,201 | INFO     | traces error code: 0
[2025-11-23 21:41:41] 2025-11-23 20:41:41,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 21:41:41] 2025-11-23 20:41:41,257 [wrapper] ==== pilot stdout END ====
[2025-11-23 21:41:41] 2025-11-23 20:41:41,259 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 21:41:41] 2025-11-23 20:41:41,260 [wrapper] pilotpid: 418735
[2025-11-23 21:41:41] 2025-11-23 20:41:41,262 [wrapper] Pilot exit status: 0
[2025-11-23 21:41:41] 2025-11-23 20:41:41,267 [wrapper] pandaids: 6895343280
[2025-11-23 21:41:41] 2025-11-23 20:41:41,282 [wrapper] cleanup supervisor_pilot  457787 418736
[2025-11-23 21:41:41] 2025-11-23 20:41:41,283 [wrapper] Test setup, not cleaning
[2025-11-23 21:41:41] 2025-11-23 20:41:41,284 [wrapper] apfmon messages muted
[2025-11-23 21:41:41] 2025-11-23 20:41:41,285 [wrapper] ==== wrapper stdout END ====
[2025-11-23 21:41:41] 2025-11-23 20:41:41,287 [wrapper] ==== wrapper stderr END ====
[2025-11-23 21:41:41]  *** Error codes and diagnostics ***
[2025-11-23 21:41:41]     "exeErrorCode": 0,
[2025-11-23 21:41:41]     "exeErrorDiag": "",
[2025-11-23 21:41:41]     "pilotErrorCode": 0,
[2025-11-23 21:41:41]     "pilotErrorDiag": "",
[2025-11-23 21:41:41]  *** Listing of results directory ***
[2025-11-23 21:41:41] total 1322160
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc    576529 Nov 22 16:48 pilot3.tar.gz
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc      5112 Nov 22 17:00 queuedata.json
[2025-11-23 21:41:41] -rwx------ 1 boinc boinc     36292 Nov 22 17:01 runpilot2-wrapper.sh
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc       100 Nov 23 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 21:41:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 17:41 run_atlas
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc       105 Nov 23 17:41 job.xml
[2025-11-23 21:41:41] -rw-r--r-- 2 boinc boinc     15847 Nov 23 17:41 start_atlas.sh
[2025-11-23 21:41:41] drwxrwx--x 2 boinc boinc      4096 Nov 23 17:41 shared
[2025-11-23 21:41:41] -rw-r--r-- 2 boinc boinc    590098 Nov 23 17:41 input.tar.gz
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc      6727 Nov 23 17:41 init_data.xml
[2025-11-23 21:41:41] -rw-r--r-- 2 boinc boinc 410867841 Nov 23 17:41 EVNT.47483658._000419.pool.root.1
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc         0 Nov 23 17:41 boinc_lockfile
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc      2785 Nov 23 17:41 pandaJob.out
[2025-11-23 21:41:41] -rw------- 1 boinc boinc    989785 Nov 23 17:41 agis_schedconf.cvmfs.json
[2025-11-23 21:41:41] drwx------ 5 boinc boinc      4096 Nov 23 17:41 pilot3
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc       533 Nov 23 21:35 boinc_task_state.xml
[2025-11-23 21:41:41] -rw------- 1 boinc boinc 931069664 Nov 23 21:40 HITS.47556137._004142.pool.root.1
[2025-11-23 21:41:41] -rw------- 1 boinc boinc      1030 Nov 23 21:40 memory_monitor_summary.json
[2025-11-23 21:41:41] -rw------- 1 boinc boinc        95 Nov 23 21:40 pilot_heartbeat.json
[2025-11-23 21:41:41] -rw------- 1 boinc boinc   1526164 Nov 23 21:41 agis_ddmendpoints.agis.ALL.json
[2025-11-23 21:41:41] -rw------- 1 boinc boinc   1968648 Nov 23 21:41 log.47556137._004142.job.log.tgz.1
[2025-11-23 21:41:41] -rw------- 1 boinc boinc      8604 Nov 23 21:41 heartbeat.json
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc        29 Nov 23 21:41 wrapper_checkpoint.txt
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc      8192 Nov 23 21:41 boinc_mmap_file
[2025-11-23 21:41:41] -rw------- 1 boinc boinc      4560 Nov 23 21:41 pilotlog.txt
[2025-11-23 21:41:41] -rw------- 1 boinc boinc   2048358 Nov 23 21:41 log.47556137._004142.job.log.1
[2025-11-23 21:41:41] -rw------- 1 boinc boinc       353 Nov 23 21:41 output.list
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc       620 Nov 23 21:41 runtime_log
[2025-11-23 21:41:41] -rw------- 1 boinc boinc   4034560 Nov 23 21:41 result.tar.gz
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc      9133 Nov 23 21:41 runtime_log.err
[2025-11-23 21:41:41] -rw------- 1 boinc boinc       714 Nov 23 21:41 fOfKDmtE5g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3EKKDmrTJFAo.diag
[2025-11-23 21:41:41] -rw-r--r-- 1 boinc boinc     21327 Nov 23 21:41 stderr.txt
[2025-11-23 21:41:41] HITS file was successfully produced:
[2025-11-23 21:41:41] -rw------- 1 boinc boinc 931069664 Nov 23 21:40 shared/HITS.pool.root.1
[2025-11-23 21:41:41]  *** Contents of shared directory: ***
[2025-11-23 21:41:41] total 1315032
[2025-11-23 21:41:41] -rw-r--r-- 2 boinc boinc     15847 Nov 23 17:41 start_atlas.sh
[2025-11-23 21:41:41] -rw-r--r-- 2 boinc boinc    590098 Nov 23 17:41 input.tar.gz
[2025-11-23 21:41:41] -rw-r--r-- 2 boinc boinc 410867841 Nov 23 17:41 ATLAS.root_0
[2025-11-23 21:41:41] -rw------- 1 boinc boinc 931069664 Nov 23 21:40 HITS.pool.root.1
[2025-11-23 21:41:41] -rw------- 1 boinc boinc   4034560 Nov 23 21:41 result.tar.gz
21:41:43 (414897): run_atlas exited; CPU time 165750.457367
21:41:43 (414897): called boinc_finish(0)

</stderr_txt>
]]>

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