Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:51:49 (27257): wrapper (7.7.26015): starting
03:51:49 (27257): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 03:51:49] Arguments: --nthreads 8
[2025-11-26 03:51:49] Threads: 8
[2025-11-26 03:51:49] Checking for CVMFS
[2025-11-26 03:51:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 03:51:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 03:51:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 03:51:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 03:51:52] 2.11.2.0 32354 284766 137984 153305 1 85 21648977 25165824 4632 130560 12 133503801 99.860 86340277 2739 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 03:51:52] CVMFS is ok
[2025-11-26 03:51:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 03:51:52] Checking for apptainer binary...
[2025-11-26 03:51:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 03:51:52] Running /usr/bin/apptainer --version
[2025-11-26 03:51:53] apptainer version 1.3.2-1.el7
[2025-11-26 03:51:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 03:52:01] cg-vwn392.simple-grid.lan
[2025-11-26 03:52:01] apptainer works
[2025-11-26 03:52:01] Set ATHENA_PROC_NUMBER=8
[2025-11-26 03:52:01] Set ATHENA_CORE_NUMBER=8
[2025-11-26 03:52:02] Starting ATLAS job with PandaID=6895335995
[2025-11-26 03:52:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:33:17]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:33:17] 2025-11-27 00:32:30,659 | INFO     | time since job start (77808s) is within the limit (172800.0s)
[2025-11-27 01:33:17] 2025-11-27 00:32:31,026 | INFO     | monitor loop #5266: job 0:6895335995 is in state 'finished'
[2025-11-27 01:33:17] 2025-11-27 00:32:31,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:33:17] 2025-11-27 00:32:32,666 | INFO     | time since job start (77810s) is within the limit (172800.0s)
[2025-11-27 01:33:17] 2025-11-27 00:32:33,532 | INFO     | monitor loop #5267: job 0:6895335995 is in state 'finished'
[2025-11-27 01:33:17] 2025-11-27 00:32:33,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:33:17] 2025-11-27 00:32:33,884 | INFO     | PID=31043 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:33:17] 2025-11-27 00:32:33,885 | INFO     | .. there are 9 such processes running
[2025-11-27 01:33:17] 2025-11-27 00:32:34,885 | INFO     | time since job start (77812s) is within the limit (172800.0s)
[2025-11-27 01:33:17] 2025-11-27 00:32:36,039 | INFO     | monitor loop #5268: job 0:6895335995 is in state 'finished'
[2025-11-27 01:33:17] 2025-11-27 00:32:36,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:33:17] 2025-11-27 00:32:36,894 | INFO     | time since job start (77814s) is within the limit (172800.0s)
[2025-11-27 01:33:17] 2025-11-27 00:32:38,545 | INFO     | monitor loop #5269: job 0:6895335995 is in state 'finished'
[2025-11-27 01:33:17] 2025-11-27 00:32:38,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:33:17] 2025-11-27 00:32:38,906 | INFO     | time since job start (77816s) is within the limit (172800.0s)
[2025-11-27 01:33:17] 2025-11-27 00:32:40,258 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 01:33:17] 2025-11-27 00:32:40,259 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 01:33:17] 2025-11-27 00:32:40,261 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6895335995/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:33:17] 2025-11-27 00:32:40,262 | INFO     | extracted standard info from prmon json
[2025-11-27 01:33:17] 2025-11-27 00:32:40,262 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:33:17] 2025-11-27 00:32:40,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:33:17] 2025-11-27 00:32:40,284 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:33:17] 2025-11-27 00:32:40,286 | INFO     | sum of square deviations: 629183325052.4617
[2025-11-27 01:33:17] 2025-11-27 00:32:40,332 | INFO     | sum of deviations: 2920815584311.96
[2025-11-27 01:33:17] 2025-11-27 00:32:40,333 | INFO     | mean x: 1764164828.5055292
[2025-11-27 01:33:17] 2025-11-27 00:32:40,333 | INFO     | mean y: 2832098.4344391786
[2025-11-27 01:33:17] 2025-11-27 00:32:40,333 | INFO     | intersect: -8186832057.023499
[2025-11-27 01:33:17] 2025-11-27 00:32:40,335 | INFO     | chi2: 21.54690167099337
[2025-11-27 01:33:17] 2025-11-27 00:32:40,336 | INFO     | sum of square deviations: 621758299669.8859
[2025-11-27 01:33:17] 2025-11-27 00:32:40,391 | INFO     | sum of deviations: 3338683067414.9634
[2025-11-27 01:33:17] 2025-11-27 00:32:40,391 | INFO     | mean x: 1764164676.0095162
[2025-11-27 01:33:17] 2025-11-27 00:32:40,392 | INFO     | mean y: 2840679.9199048374
[2025-11-27 01:33:17] 2025-11-27 00:32:40,392 | INFO     | intersect: -9470272481.660383
[2025-11-27 01:33:17] 2025-11-27 00:32:40,393 | INFO     | chi2: 18.318857701998613
[2025-11-27 01:33:17] 2025-11-27 00:32:40,393 | INFO     | current chi2=18.318857701998613 (change=14.98147630821734 %)
[2025-11-27 01:33:17] 2025-11-27 00:32:40,393 | INFO     | right removable region: 1260
[2025-11-27 01:33:17] 2025-11-27 00:32:40,395 | INFO     | sum of square deviations: 621757523139.8857
[2025-11-27 01:33:17] 2025-11-27 00:32:40,437 | INFO     | sum of deviations: 2410610135442.2456
[2025-11-27 01:33:17] 2025-11-27 00:32:40,437 | INFO     | mean x: 1764164981.0095162
[2025-11-27 01:33:17] 2025-11-27 00:32:40,437 | INFO     | mean y: 2842575.146708961
[2025-11-27 01:33:17] 2025-11-27 00:32:40,437 | INFO     | intersect: -6836984568.942423
[2025-11-27 01:33:17] 2025-11-27 00:32:40,439 | INFO     | chi2: 17.17448471019335
[2025-11-27 01:33:17] 2025-11-27 00:32:40,439 | INFO     | current chi2=17.17448471019335 (change=20.29255541035028 %)
[2025-11-27 01:33:17] 2025-11-27 00:32:40,439 | INFO     | left removable region: 10
[2025-11-27 01:33:17] 2025-11-27 00:32:40,441 | INFO     | sum of square deviations: 605627819284.077
[2025-11-27 01:33:17] 2025-11-27 00:32:40,487 | INFO     | sum of deviations: 2471855410197.947
[2025-11-27 01:33:17] 2025-11-27 00:32:40,488 | INFO     | mean x: 1764164950.5184
[2025-11-27 01:33:17] 2025-11-27 00:32:40,488 | INFO     | mean y: 2863005.1328
[2025-11-27 01:33:17] 2025-11-27 00:32:40,488 | INFO     | intersect: -7197533902.947528
[2025-11-27 01:33:17] 2025-11-27 00:32:40,489 | INFO     | chi2: 9.496439026521603
[2025-11-27 01:33:17] 2025-11-27 00:32:40,490 | INFO     | current memory leak: 4.08 B/s (using 1250 data points, chi2=9.50)
[2025-11-27 01:33:17] 2025-11-27 00:32:40,491 | INFO     | could have reported an average CPU frequency of 1999 MHz (43 samples)
[2025-11-27 01:33:17] 2025-11-27 00:32:40,491 | INFO     | ..............................
[2025-11-27 01:33:17] 2025-11-27 00:32:40,491 | INFO     | . Timing measurements:
[2025-11-27 01:33:17] 2025-11-27 00:32:40,491 | INFO     | . get job = 0 s
[2025-11-27 01:33:17] 2025-11-27 00:32:40,491 | INFO     | . initial setup = 9 s
[2025-11-27 01:33:17] 2025-11-27 00:32:40,491 | INFO     | . payload setup = 159 s
[2025-11-27 01:33:17] 2025-11-27 00:32:40,491 | INFO     | . stage-in = 0 s
[2025-11-27 01:33:17] 2025-11-27 00:32:40,491 | INFO     | . payload execution = 77356 s
[2025-11-27 01:33:17] 2025-11-27 00:32:40,492 | INFO     | . stage-out = 5 s
[2025-11-27 01:33:17] 2025-11-27 00:32:40,492 | INFO     | . log creation = 1 s
[2025-11-27 01:33:17] 2025-11-27 00:32:40,492 | INFO     | ..............................
[2025-11-27 01:33:17] 2025-11-27 00:32:40,606 | INFO     | 
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | job summary report
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | --------------------------------------------------
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | PanDA job id: 6895335995
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | task id: 47556137
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | errors: (none)
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | pilot state: finished 
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | transexitcode: 0
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | exeerrorcode: 0
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | exeerrordiag: 
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | exitcode: 0
[2025-11-27 01:33:17] 2025-11-27 00:32:40,607 | INFO     | exitmsg: OK
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | cpuconsumptiontime: 324305 s
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | nevents: 1000
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | neventsw: 0
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | pid: 5287
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | pgrp: 5287
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | corecount: 8
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | event service: False
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | sizes: {0: 2284037, 1: 2284292, 2: 2284292, 12: 2284320, 23: 2284348, 34: 2284376, 45: 2284532, 55: 2284560, 66: 2284588, 77: 2284616, 88: 2284672, 97: 2285242, 98
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | --------------------------------------------------
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | 
[2025-11-27 01:33:17] 2025-11-27 00:32:40,608 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-27 01:33:17] 2025-11-27 00:32:40,925 | INFO     | time since job start (77818s) is within the limit (172800.0s)
[2025-11-27 01:33:17] 2025-11-27 00:32:41,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,089 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:33:17] 2025-11-27 00:32:41,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,092 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:33:17] 2025-11-27 00:32:41,092 | INFO     | job 6895335995 has completed (purged errors)
[2025-11-27 01:33:17] 2025-11-27 00:32:41,092 | INFO     | overall cleanup function is called
[2025-11-27 01:33:17] 2025-11-27 00:32:42,110 | INFO     | --- collectZombieJob: --- 10, [5287]
[2025-11-27 01:33:17] 2025-11-27 00:32:42,111 | INFO     | zombie collector waiting for pid 5287
[2025-11-27 01:33:17] 2025-11-27 00:32:42,111 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:33:17] 2025-11-27 00:32:42,111 | INFO     | collected zombie processes
[2025-11-27 01:33:17] 2025-11-27 00:32:42,111 | INFO     | will attempt to kill all subprocesses of pid=5287
[2025-11-27 01:33:17] 2025-11-27 00:32:42,256 | INFO     | process IDs to be killed: [5287] (in reverse order)
[2025-11-27 01:33:17] 2025-11-27 00:32:43,178 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:33:17] 2025-11-27 00:32:43,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:33:17] 2025-11-27 00:32:43,181 | INFO     | did not find any defunct processes belonging to 5287
[2025-11-27 01:33:17] 2025-11-27 00:32:43,187 | INFO     | did not find any defunct processes belonging to 5287
[2025-11-27 01:33:17] 2025-11-27 00:32:43,230 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:33:17] 2025-11-27 00:32:43,230 | INFO     | ready for new job
[2025-11-27 01:33:17] 2025-11-27 00:32:43,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:33:17] 2025-11-27 00:32:43,235 | INFO     | ***************************************
[2025-11-27 01:33:17] 2025-11-27 00:32:43,236 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:33:17] 2025-11-27 00:32:43,236 | INFO     | ***************************************
[2025-11-27 01:33:17] 2025-11-27 00:32:43,236 | INFO     | 
[2025-11-27 01:33:17] 2025-11-27 00:32:43,236 | INFO     | pilot is running in a VM
[2025-11-27 01:33:17] 2025-11-27 00:32:43,237 | INFO     | architecture information:
[2025-11-27 01:33:17] 2025-11-27 00:32:43,246 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:33:17] 2025-11-27 00:32:43,475 | INFO     | cat /etc/os-release:
[2025-11-27 01:33:17] NAME="CentOS Linux"
[2025-11-27 01:33:17] VERSION="7 (Core)"
[2025-11-27 01:33:17] ID="centos"
[2025-11-27 01:33:17] ID_LIKE="rhel fedora"
[2025-11-27 01:33:17] VERSION_ID="7"
[2025-11-27 01:33:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:33:17] ANSI_COLOR="0;31"
[2025-11-27 01:33:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:33:17] HOME_URL="https://www.centos.org/"
[2025-11-27 01:33:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:33:17] 
[2025-11-27 01:33:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:33:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:33:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:33:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:33:17] 
[2025-11-27 01:33:17] 2025-11-27 00:32:43,475 | INFO     | ***************************************
[2025-11-27 01:33:17] 2025-11-27 00:32:43,978 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-27 01:33:17] 2025-11-27 00:32:44,114 | INFO     | sufficient remaining disk space (495618883584 B)
[2025-11-27 01:33:17] 2025-11-27 00:32:44,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:33:17] 2025-11-27 00:32:44,115 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:33:17] 2025-11-27 00:32:44,115 | INFO     | update_server=False
[2025-11-27 01:33:17] 2025-11-27 00:32:44,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:33:17] 2025-11-27 00:32:44,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:33:17] 2025-11-27 00:32:44,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:33:17] 2025-11-27 00:32:44,574 | INFO     | aborting loop
[2025-11-27 01:33:17] 2025-11-27 00:32:44,722 | INFO     | all payload control threads have been joined
[2025-11-27 01:33:17] 2025-11-27 00:32:44,990 | INFO     | all data control threads have been joined
[2025-11-27 01:33:17] 2025-11-27 00:32:45,120 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:45,315 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:45,440 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:45,453 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:45,575 | INFO     | all job control threads have been joined
[2025-11-27 01:33:17] 2025-11-27 00:32:45,579 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:45,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:33:17] 2025-11-27 00:32:45,728 | INFO     | [payload] control thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:45,885 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:45,996 | INFO     | [data] control thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:46,014 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:46,037 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:46,128 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:46,339 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:46,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:33:17] 2025-11-27 00:32:46,549 | INFO     | [job] validate thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:46,581 | INFO     | [job] control thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:46,632 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:50,472 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:33:17] 2025-11-27 00:32:56,836 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:33:17] 2025-11-27 00:32:57,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884792059712)>', '<ExcThread(monitor, started 139884492728064)>']
[2025-11-27 01:33:17] 2025-11-27 00:33:03,003 | INFO     | all workflow threads have been joined
[2025-11-27 01:33:17] 2025-11-27 00:33:03,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:33:17] 2025-11-27 00:33:03,004 | INFO     | traces error code: 0
[2025-11-27 01:33:17] 2025-11-27 00:33:03,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:33:17] 2025-11-27 00:33:14,081 | INFO     | PID=31043 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:33:17] 2025-11-27 00:33:14,082 | INFO     | .. there are 9 such processes running
[2025-11-27 01:33:17] 2025-11-27 00:33:14,083 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:33:17] 2025-11-27 00:33:14,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:33:17] 2025-11-27 00:33:14,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:33:17] 2025-11-27 00:33:14,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:33:17] 2025-11-27 00:33:14,084 | INFO     | [monitor] control thread has ended
[2025-11-27 01:33:17] 2025-11-27 00:33:14,395 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:33:17] 2025-11-27 00:33:14,513 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:33:17] 2025-11-27 00:33:14,622 [wrapper] pilotpid: 31043
[2025-11-27 01:33:17] 2025-11-27 00:33:14,700 [wrapper] Pilot exit status: 0
[2025-11-27 01:33:17] 2025-11-27 00:33:15,039 [wrapper] pandaids: 6895335995
[2025-11-27 01:33:17] 2025-11-27 00:33:15,845 [wrapper] cleanup supervisor_pilot  8137 31044
[2025-11-27 01:33:17] 2025-11-27 00:33:15,955 [wrapper] Test setup, not cleaning
[2025-11-27 01:33:17] 2025-11-27 00:33:16,081 [wrapper] apfmon messages muted
[2025-11-27 01:33:17] 2025-11-27 00:33:16,160 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:33:17] 2025-11-27 00:33:16,258 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:33:17]  *** Error codes and diagnostics ***
[2025-11-27 01:33:17]     "exeErrorCode": 0,
[2025-11-27 01:33:17]     "exeErrorDiag": "",
[2025-11-27 01:33:17]     "pilotErrorCode": 0,
[2025-11-27 01:33:17]     "pilotErrorDiag": "",
[2025-11-27 01:33:17]  *** Listing of results directory ***
[2025-11-27 01:33:18] total 1349524
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc    576529 Nov 22 05:55 pilot3.tar.gz
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc      5112 Nov 22 06:01 queuedata.json
[2025-11-27 01:33:18] -rwx------. 1 boinc boinc     36292 Nov 22 06:02 runpilot2-wrapper.sh
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc       100 Nov 26 03:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:33:18] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 03:51 run_atlas
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc       105 Nov 26 03:51 job.xml
[2025-11-27 01:33:18] -rw-r--r--. 2 boinc boinc 412390553 Nov 26 03:51 EVNT.47483658._000262.pool.root.1
[2025-11-27 01:33:18] drwxrwx--x. 2 boinc boinc        68 Nov 26 03:51 shared
[2025-11-27 01:33:18] -rw-r--r--. 2 boinc boinc    590100 Nov 26 03:51 input.tar.gz
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc      6392 Nov 26 03:51 init_data.xml
[2025-11-27 01:33:18] -rw-r--r--. 2 boinc boinc     15847 Nov 26 03:51 start_atlas.sh
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc         0 Nov 26 03:51 boinc_lockfile
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc      2785 Nov 26 03:52 pandaJob.out
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc    991877 Nov 26 03:55 agis_schedconf.cvmfs.json
[2025-11-27 01:33:18] drwx------. 5 boinc boinc      4096 Nov 26 03:55 pilot3
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc       533 Nov 27 01:08 boinc_task_state.xml
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc 940021128 Nov 27 01:29 HITS.47556137._002589.pool.root.1
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc      1030 Nov 27 01:30 memory_monitor_summary.json
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc   1516240 Nov 27 01:30 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc   2380664 Nov 27 01:30 log.47556137._002589.job.log.tgz.1
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc      7940 Nov 27 01:32 heartbeat.json
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc      8192 Nov 27 01:32 boinc_mmap_file
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc        29 Nov 27 01:32 wrapper_checkpoint.txt
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc        95 Nov 27 01:33 pilot_heartbeat.json
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc       820 Nov 27 01:33 pilotlog.txt
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc  10419006 Nov 27 01:33 log.47556137._002589.job.log.1
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc       353 Nov 27 01:33 output.list
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc       620 Nov 27 01:33 runtime_log
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc  12820480 Nov 27 01:33 result.tar.gz
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc      8817 Nov 27 01:33 runtime_log.err
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc       662 Nov 27 01:33 5ohLDmywug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXxJKDmTBbBTn.diag
[2025-11-27 01:33:18] -rw-r--r--. 1 boinc boinc     21483 Nov 27 01:33 stderr.txt
[2025-11-27 01:33:18] HITS file was successfully produced:
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc 940021128 Nov 27 01:29 shared/HITS.pool.root.1
[2025-11-27 01:33:18]  *** Contents of shared directory: ***
[2025-11-27 01:33:18] total 1333836
[2025-11-27 01:33:18] -rw-r--r--. 2 boinc boinc 412390553 Nov 26 03:51 ATLAS.root_0
[2025-11-27 01:33:18] -rw-r--r--. 2 boinc boinc    590100 Nov 26 03:51 input.tar.gz
[2025-11-27 01:33:18] -rw-r--r--. 2 boinc boinc     15847 Nov 26 03:51 start_atlas.sh
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc 940021128 Nov 27 01:29 HITS.pool.root.1
[2025-11-27 01:33:18] -rw-------. 1 boinc boinc  12820480 Nov 27 01:33 result.tar.gz
01:33:19 (27257): run_atlas exited; CPU time 324798.183035
01:33:19 (27257): called boinc_finish(0)

</stderr_txt>
]]>

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