Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:43:15 (15782): wrapper (7.7.26015): starting
08:43:15 (15782): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 08:43:15] Arguments: --nthreads 8
[2025-11-23 08:43:15] Threads: 8
[2025-11-23 08:43:15] Checking for CVMFS
[2025-11-23 08:43:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:43:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:43:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:43:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:43:16] 2.11.2.0 2934 172579 82192 153210 3 82 15178758 20275201 1 130560 1 65166023 99.950 7890476 22987 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 08:43:16] CVMFS is ok
[2025-11-23 08:43:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:43:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:43:16] Further information can be found at the LHC@home message board.
[2025-11-23 08:43:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:43:16] Checking for apptainer binary...
[2025-11-23 08:43:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:43:16] Running /usr/bin/apptainer --version
[2025-11-23 08:43:16] apptainer version 1.3.2-1.el7
[2025-11-23 08:43:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:43:17] c-204-33.aglt2.org
[2025-11-23 08:43:17] apptainer works
[2025-11-23 08:43:17] Set ATHENA_PROC_NUMBER=8
[2025-11-23 08:43:17] Set ATHENA_CORE_NUMBER=8
[2025-11-23 08:43:17] Starting ATLAS job with PandaID=6895334454
[2025-11-23 08:43:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 21:31:56]  *** The last 200 lines of the pilot log: ***
[2025-11-23 21:31:56] 2025-11-24 02:31:20,409 | INFO     | monitor loop #3383: job 0:6895334454 is in state 'finished'
[2025-11-23 21:31:56] 2025-11-24 02:31:20,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 21:31:56] 2025-11-24 02:31:20,798 | INFO     | time since job start (46066s) is within the limit (172800.0s)
[2025-11-23 21:31:56] 2025-11-24 02:31:22,704 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 21:31:56] 2025-11-24 02:31:22,709 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.375
[2025-11-23 21:31:56] 2025-11-24 02:31:22,712 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895334454/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 21:31:56] 2025-11-24 02:31:22,712 | INFO     | extracted standard info from prmon json
[2025-11-23 21:31:56] 2025-11-24 02:31:22,712 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 21:31:56] 2025-11-24 02:31:22,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 21:31:56] 2025-11-24 02:31:22,725 | INFO     | fitting pss+swap vs Time
[2025-11-23 21:31:56] 2025-11-24 02:31:22,726 | INFO     | sum of square deviations: 133450397382.37088
[2025-11-23 21:31:56] 2025-11-24 02:31:22,738 | INFO     | sum of deviations: 848671821586.5505
[2025-11-23 21:31:56] 2025-11-24 02:31:22,738 | INFO     | mean x: 1763928442.576159
[2025-11-23 21:31:56] 2025-11-24 02:31:22,738 | INFO     | mean y: 2879447.6860927152
[2025-11-23 21:31:56] 2025-11-24 02:31:22,739 | INFO     | intersect: -11214744432.594633
[2025-11-23 21:31:56] 2025-11-24 02:31:22,739 | INFO     | chi2: 5.5103386926557505
[2025-11-23 21:31:56] 2025-11-24 02:31:22,740 | INFO     | sum of square deviations: 130816722533.19946
[2025-11-23 21:31:56] 2025-11-24 02:31:22,752 | INFO     | sum of deviations: 1077032572296.84
[2025-11-23 21:31:56] 2025-11-24 02:31:22,752 | INFO     | mean x: 1763928290.08
[2025-11-23 21:31:56] 2025-11-24 02:31:22,752 | INFO     | mean y: 2892658.8693333333
[2025-11-23 21:31:56] 2025-11-24 02:31:22,753 | INFO     | intersect: -14519778348.500416
[2025-11-23 21:31:56] 2025-11-24 02:31:22,753 | INFO     | chi2: 2.8042698743506365
[2025-11-23 21:31:56] 2025-11-24 02:31:22,753 | INFO     | current chi2=2.8042698743506365 (change=49.10893811140497 %)
[2025-11-23 21:31:56] 2025-11-24 02:31:22,754 | INFO     | sum of square deviations: 128217932059.00685
[2025-11-23 21:31:56] 2025-11-24 02:31:22,766 | INFO     | sum of deviations: 1144353387116.0454
[2025-11-23 21:31:56] 2025-11-24 02:31:22,766 | INFO     | mean x: 1763928137.5838926
[2025-11-23 21:31:56] 2025-11-24 02:31:22,766 | INFO     | mean y: 2896604.087248322
[2025-11-23 21:31:56] 2025-11-24 02:31:22,766 | INFO     | intersect: -15740276807.448278
[2025-11-23 21:31:56] 2025-11-24 02:31:22,767 | INFO     | chi2: 2.4613283999030244
[2025-11-23 21:31:56] 2025-11-24 02:31:22,767 | INFO     | current chi2=2.4613283999030244 (change=12.229260727875713 %)
[2025-11-23 21:31:56] 2025-11-24 02:31:22,768 | INFO     | right removable region: 744
[2025-11-23 21:31:56] 2025-11-24 02:31:22,768 | INFO     | sum of square deviations: 130816457183.19945
[2025-11-23 21:31:56] 2025-11-24 02:31:22,780 | INFO     | sum of deviations: 642874556675.2802
[2025-11-23 21:31:56] 2025-11-24 02:31:22,780 | INFO     | mean x: 1763928595.08
[2025-11-23 21:31:56] 2025-11-24 02:31:22,780 | INFO     | mean y: 2891342.445333333
[2025-11-23 21:31:56] 2025-11-24 02:31:22,780 | INFO     | intersect: -8665626655.87377
[2025-11-23 21:31:56] 2025-11-24 02:31:22,781 | INFO     | chi2: 3.2282074055749606
[2025-11-23 21:31:56] 2025-11-24 02:31:22,781 | INFO     | current chi2=3.2282074055749606 (change=41.41544493666866 %)
[2025-11-23 21:31:56] 2025-11-24 02:31:22,782 | INFO     | sum of square deviations: 128217492493.33685
[2025-11-23 21:31:56] 2025-11-24 02:31:22,794 | INFO     | sum of deviations: 601418691073.3026
[2025-11-23 21:31:56] 2025-11-24 02:31:22,794 | INFO     | mean x: 1763928747.581208
[2025-11-23 21:31:56] 2025-11-24 02:31:22,794 | INFO     | mean y: 2893773.5073825503
[2025-11-23 21:31:56] 2025-11-24 02:31:22,794 | INFO     | intersect: -8271014083.269572
[2025-11-23 21:31:56] 2025-11-24 02:31:22,795 | INFO     | chi2: 3.1918169487621024
[2025-11-23 21:31:56] 2025-11-24 02:31:22,795 | INFO     | current chi2=3.1918169487621024 (change=1.127265142568397 %)
[2025-11-23 21:31:56] 2025-11-24 02:31:22,795 | INFO     | left removable region: 20
[2025-11-23 21:31:56] 2025-11-24 02:31:22,796 | INFO     | sum of square deviations: 117677909192.79948
[2025-11-23 21:31:56] 2025-11-24 02:31:22,807 | INFO     | sum of deviations: 849967028380.3771
[2025-11-23 21:31:56] 2025-11-24 02:31:22,807 | INFO     | mean x: 1763928717.0925415
[2025-11-23 21:31:56] 2025-11-24 02:31:22,807 | INFO     | time since job start (46068s) is within the limit (172800.0s)
[2025-11-23 21:31:56] 2025-11-24 02:31:22,808 | INFO     | mean y: 2914393.143646409
[2025-11-23 21:31:56] 2025-11-24 02:31:22,808 | INFO     | intersect: -12737635300.729542
[2025-11-23 21:31:56] 2025-11-24 02:31:22,809 | INFO     | chi2: 0.11193199067465906
[2025-11-23 21:31:56] 2025-11-24 02:31:22,809 | INFO     | current memory leak: 7.22 B/s (using 724 data points, chi2=0.11)
[2025-11-23 21:31:56] 2025-11-24 02:31:22,810 | INFO     | could have reported an average CPU frequency of 2153 MHz (29 samples)
[2025-11-23 21:31:56] 2025-11-24 02:31:22,810 | INFO     | ..............................
[2025-11-23 21:31:56] 2025-11-24 02:31:22,810 | INFO     | . Timing measurements:
[2025-11-23 21:31:56] 2025-11-24 02:31:22,810 | INFO     | . get job = 0 s
[2025-11-23 21:31:56] 2025-11-24 02:31:22,810 | INFO     | . initial setup = 2 s
[2025-11-23 21:31:56] 2025-11-24 02:31:22,810 | INFO     | . payload setup = 8 s
[2025-11-23 21:31:56] 2025-11-24 02:31:22,811 | INFO     | . stage-in = 0 s
[2025-11-23 21:31:56] 2025-11-24 02:31:22,811 | INFO     | . payload execution = 46028 s
[2025-11-23 21:31:56] 2025-11-24 02:31:22,811 | INFO     | . stage-out = 3 s
[2025-11-23 21:31:56] 2025-11-24 02:31:22,811 | INFO     | . log creation = 0 s
[2025-11-23 21:31:56] 2025-11-24 02:31:22,811 | INFO     | ..............................
[2025-11-23 21:31:56] 2025-11-24 02:31:23,113 | INFO     | 
[2025-11-23 21:31:56] 2025-11-24 02:31:23,113 | INFO     | job summary report
[2025-11-23 21:31:56] 2025-11-24 02:31:23,113 | INFO     | --------------------------------------------------
[2025-11-23 21:31:56] 2025-11-24 02:31:23,113 | INFO     | PanDA job id: 6895334454
[2025-11-23 21:31:56] 2025-11-24 02:31:23,114 | INFO     | task id: 47556137
[2025-11-23 21:31:56] 2025-11-24 02:31:23,114 | INFO     | errors: (none)
[2025-11-23 21:31:56] 2025-11-24 02:31:23,114 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 21:31:56] 2025-11-24 02:31:23,114 | INFO     | pilot state: finished 
[2025-11-23 21:31:56] 2025-11-24 02:31:23,114 | INFO     | transexitcode: 0
[2025-11-23 21:31:56] 2025-11-24 02:31:23,114 | INFO     | exeerrorcode: 0
[2025-11-23 21:31:56] 2025-11-24 02:31:23,115 | INFO     | exeerrordiag: 
[2025-11-23 21:31:56] 2025-11-24 02:31:23,115 | INFO     | exitcode: 0
[2025-11-23 21:31:56] 2025-11-24 02:31:23,115 | INFO     | exitmsg: OK
[2025-11-23 21:31:56] 2025-11-24 02:31:23,115 | INFO     | cpuconsumptiontime: 355892 s
[2025-11-23 21:31:56] 2025-11-24 02:31:23,115 | INFO     | nevents: 1000
[2025-11-23 21:31:56] 2025-11-24 02:31:23,115 | INFO     | neventsw: 0
[2025-11-23 21:31:56] 2025-11-24 02:31:23,115 | INFO     | pid: 25900
[2025-11-23 21:31:56] 2025-11-24 02:31:23,115 | INFO     | pgrp: 25900
[2025-11-23 21:31:56] 2025-11-24 02:31:23,116 | INFO     | corecount: 8
[2025-11-23 21:31:56] 2025-11-24 02:31:23,116 | INFO     | event service: False
[2025-11-23 21:31:56] 2025-11-24 02:31:23,116 | INFO     | sizes: {0: 2298585, 1: 2298784, 6: 2299046, 12: 2299074, 46040: 2345416, 46045: 2354594, 46052: 2354784}
[2025-11-23 21:31:56] 2025-11-24 02:31:23,116 | INFO     | --------------------------------------------------
[2025-11-23 21:31:56] 2025-11-24 02:31:23,116 | INFO     | 
[2025-11-23 21:31:56] 2025-11-24 02:31:23,116 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 21:31:56] 2025-11-24 02:31:23,142 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,142 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,143 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,143 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,144 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,144 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,144 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,144 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,144 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,145 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 21:31:56] 2025-11-24 02:31:23,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,146 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 21:31:56] 2025-11-24 02:31:23,146 | INFO     | job 6895334454 has completed (purged errors)
[2025-11-23 21:31:56] 2025-11-24 02:31:23,146 | INFO     | overall cleanup function is called
[2025-11-23 21:31:56] 2025-11-24 02:31:24,161 | INFO     | --- collectZombieJob: --- 10, [25900]
[2025-11-23 21:31:56] 2025-11-24 02:31:24,161 | INFO     | zombie collector waiting for pid 25900
[2025-11-23 21:31:56] 2025-11-24 02:31:24,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 21:31:56] 2025-11-24 02:31:24,162 | INFO     | collected zombie processes
[2025-11-23 21:31:56] 2025-11-24 02:31:24,162 | INFO     | will attempt to kill all subprocesses of pid=25900
[2025-11-23 21:31:56] 2025-11-24 02:31:24,257 | INFO     | process IDs to be killed: [25900] (in reverse order)
[2025-11-23 21:31:56] 2025-11-24 02:31:24,313 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 21:31:56] 2025-11-24 02:31:24,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 21:31:56] 2025-11-24 02:31:24,318 | INFO     | did not find any defunct processes belonging to 25900
[2025-11-23 21:31:56] 2025-11-24 02:31:24,320 | INFO     | did not find any defunct processes belonging to 25900
[2025-11-23 21:31:56] 2025-11-24 02:31:24,323 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 21:31:56] 2025-11-24 02:31:24,323 | INFO     | ready for new job
[2025-11-23 21:31:56] 2025-11-24 02:31:24,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 21:31:56] 2025-11-24 02:31:24,327 | INFO     | ***************************************
[2025-11-23 21:31:56] 2025-11-24 02:31:24,327 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 21:31:56] 2025-11-24 02:31:24,327 | INFO     | ***************************************
[2025-11-23 21:31:56] 2025-11-24 02:31:24,328 | INFO     | 
[2025-11-23 21:31:56] 2025-11-24 02:31:24,328 | INFO     | architecture information:
[2025-11-23 21:31:56] 2025-11-24 02:31:24,329 | INFO     | executing command: cat /etc/os-release
[2025-11-23 21:31:56] 2025-11-24 02:31:24,345 | INFO     | cat /etc/os-release:
[2025-11-23 21:31:56] NAME="CentOS Linux"
[2025-11-23 21:31:56] VERSION="7 (Core)"
[2025-11-23 21:31:56] ID="centos"
[2025-11-23 21:31:56] ID_LIKE="rhel fedora"
[2025-11-23 21:31:56] VERSION_ID="7"
[2025-11-23 21:31:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 21:31:56] ANSI_COLOR="0;31"
[2025-11-23 21:31:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 21:31:56] HOME_URL="https://www.centos.org/"
[2025-11-23 21:31:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 21:31:56] 
[2025-11-23 21:31:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 21:31:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 21:31:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 21:31:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 21:31:56] 
[2025-11-23 21:31:56] 2025-11-24 02:31:24,346 | INFO     | ***************************************
[2025-11-23 21:31:56] 2025-11-24 02:31:24,849 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 21:31:56] 2025-11-24 02:31:24,869 | INFO     | sufficient remaining disk space (17458790400 B)
[2025-11-23 21:31:56] 2025-11-24 02:31:24,870 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 21:31:56] 2025-11-24 02:31:24,870 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 21:31:56] 2025-11-24 02:31:24,870 | INFO     | update_server=False
[2025-11-23 21:31:56] 2025-11-24 02:31:24,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 21:31:56] 2025-11-24 02:31:24,871 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:31:56] 2025-11-24 02:31:24,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:31:56] 2025-11-24 02:31:24,872 | INFO     | aborting loop
[2025-11-23 21:31:56] 2025-11-24 02:31:25,150 | INFO     | all data control threads have been joined
[2025-11-23 21:31:56] 2025-11-24 02:31:25,876 | INFO     | [job] retrieve thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:25,877 | INFO     | [job] job monitor thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:25,878 | INFO     | [job] queue monitor thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:26,083 | INFO     | all job control threads have been joined
[2025-11-23 21:31:56] 2025-11-24 02:31:26,135 | INFO     | [payload] failed_post thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:26,152 | INFO     | [data] control thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:26,183 | INFO     | all payload control threads have been joined
[2025-11-23 21:31:56] 2025-11-24 02:31:26,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 21:31:56] 2025-11-24 02:31:26,374 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:26,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 21:31:56] 2025-11-24 02:31:26,538 | INFO     | [payload] validate_post thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:26,564 | INFO     | [data] copytool_in thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:26,616 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:26,664 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:27,015 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:27,088 | INFO     | [job] control thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:27,189 | INFO     | [payload] control thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:27,242 | INFO     | [job] validate thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:28,344 | INFO     | [data] copytool_out thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:30,448 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 21:31:56] 2025-11-24 02:31:50,014 | INFO     | [monitor] cgroup control has ended
[2025-11-23 21:31:56] 2025-11-24 02:31:50,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140322663024448)>', '<ExcThread(monitor, started 140321899910912)>']
[2025-11-23 21:31:56] 2025-11-24 02:31:55,594 | INFO     | all workflow threads have been joined
[2025-11-23 21:31:56] 2025-11-24 02:31:55,595 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 21:31:56] 2025-11-24 02:31:55,595 | INFO     | traces error code: 0
[2025-11-23 21:31:56] 2025-11-24 02:31:55,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 21:31:56] 2025-11-24 02:31:56,031 | INFO     | PID=19454 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 21:31:56] 2025-11-24 02:31:56,031 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 21:31:56] 2025-11-24 02:31:56,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 21:31:56] 2025-11-24 02:31:56,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 21:31:56] 2025-11-24 02:31:56,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 21:31:56] 2025-11-24 02:31:56,032 | INFO     | [monitor] control thread has ended
[2025-11-23 21:31:56] 2025-11-24 02:31:56,154 [wrapper] ==== pilot stdout END ====
[2025-11-23 21:31:56] 2025-11-24 02:31:56,159 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 21:31:56] 2025-11-24 02:31:56,164 [wrapper] pilotpid: 19454
[2025-11-23 21:31:56] 2025-11-24 02:31:56,168 [wrapper] Pilot exit status: 0
[2025-11-23 21:31:56] 2025-11-24 02:31:56,184 [wrapper] pandaids: 6895334454
[2025-11-23 21:31:56] 2025-11-24 02:31:56,228 [wrapper] cleanup supervisor_pilot 15364 19455
[2025-11-23 21:31:56] 2025-11-24 02:31:56,233 [wrapper] Test setup, not cleaning
[2025-11-23 21:31:56] 2025-11-24 02:31:56,237 [wrapper] apfmon messages muted
[2025-11-23 21:31:56] 2025-11-24 02:31:56,241 [wrapper] ==== wrapper stdout END ====
[2025-11-23 21:31:56] 2025-11-24 02:31:56,246 [wrapper] ==== wrapper stderr END ====
[2025-11-23 21:31:56]  *** Error codes and diagnostics ***
[2025-11-23 21:31:56]     "exeErrorCode": 0,
[2025-11-23 21:31:56]     "exeErrorDiag": "",
[2025-11-23 21:31:56]     "pilotErrorCode": 0,
[2025-11-23 21:31:56]     "pilotErrorDiag": "",
[2025-11-23 21:31:56]  *** Listing of results directory ***
[2025-11-23 21:31:56] total 1326480
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 22:44 pilot3.tar.gz
[2025-11-23 21:31:56] -rwx------ 1 boincer umatlas     36292 Nov 21 22:47 runpilot2-wrapper.sh
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 22:47 queuedata.json
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas       100 Nov 23 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 21:31:56] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 08:43 run_atlas
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas       105 Nov 23 08:43 job.xml
[2025-11-23 21:31:56] -rw-r--r-- 2 boincer umatlas 411156688 Nov 23 08:43 EVNT.47483658._000235.pool.root.1
[2025-11-23 21:31:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 08:43 start_atlas.sh
[2025-11-23 21:31:56] drwxrwx--x 2 boincer umatlas      4096 Nov 23 08:43 shared
[2025-11-23 21:31:56] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 08:43 input.tar.gz
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas         0 Nov 23 08:43 boinc_lockfile
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 08:43 pandaJob.out
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas        57 Nov 23 08:43 setup.sh.local
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas    989785 Nov 23 08:43 agis_schedconf.cvmfs.json
[2025-11-23 21:31:56] drwx------ 5 boincer umatlas      4096 Nov 23 08:43 pilot3
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas       532 Nov 23 21:19 boinc_task_state.xml
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 21:27 init_data.xml
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas 926565728 Nov 23 21:30 HITS.47556137._002316.pool.root.1
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas        95 Nov 23 21:31 pilot_heartbeat.json
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas      1063 Nov 23 21:31 memory_monitor_summary.json
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas   1526164 Nov 23 21:31 agis_ddmendpoints.agis.ALL.json
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas   1995306 Nov 23 21:31 log.47556137._002316.job.log.tgz.1
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas      8658 Nov 23 21:31 heartbeat.json
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 21:31 boinc_mmap_file
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas        29 Nov 23 21:31 wrapper_checkpoint.txt
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas       745 Nov 23 21:31 pilotlog.txt
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas   6337644 Nov 23 21:31 log.47556137._002316.job.log.1
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas       353 Nov 23 21:31 output.list
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas       620 Nov 23 21:31 runtime_log
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas   8355840 Nov 23 21:31 result.tar.gz
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 21:31 runtime_log.err
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas       668 Nov 23 21:31 lsPKDmrltg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmovHKDmsQ4tUo.diag
[2025-11-23 21:31:56] -rw-r--r-- 1 boincer umatlas     21295 Nov 23 21:31 stderr.txt
[2025-11-23 21:31:56] HITS file was successfully produced:
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas 926565728 Nov 23 21:30 shared/HITS.pool.root.1
[2025-11-23 21:31:56]  *** Contents of shared directory: ***
[2025-11-23 21:31:56] total 1315136
[2025-11-23 21:31:56] -rw-r--r-- 2 boincer umatlas 411156688 Nov 23 08:43 ATLAS.root_0
[2025-11-23 21:31:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 08:43 start_atlas.sh
[2025-11-23 21:31:56] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 08:43 input.tar.gz
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas 926565728 Nov 23 21:30 HITS.pool.root.1
[2025-11-23 21:31:56] -rw------- 1 boincer umatlas   8355840 Nov 23 21:31 result.tar.gz
21:31:57 (15782): run_atlas exited; CPU time 352081.338562
21:31:57 (15782): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN