Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:56:52 (502750): wrapper (7.7.26015): starting
10:56:52 (502750): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 10:56:52] Arguments: --nthreads 8
[2025-11-23 10:56:52] Threads: 8
[2025-11-23 10:56:52] Checking for CVMFS
[2025-11-23 10:56:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:56:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:56:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:56:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:56:53] 2.13.2.0 1657905 26147 161828 153213 3 625 33629857 40960001 41175 16776704 0 331944176 99.704 238633429 46777 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 10:56:53] CVMFS is ok
[2025-11-23 10:56:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:56:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:56:54] Further information can be found at the LHC@home message board.
[2025-11-23 10:56:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:56:54] Checking for apptainer binary...
[2025-11-23 10:56:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:56:54] Running /usr/bin/apptainer --version
[2025-11-23 10:56:55] apptainer version 1.4.4-1.el9
[2025-11-23 10:56:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:56:57] c-208-39.aglt2.org
[2025-11-23 10:56:57] apptainer works
[2025-11-23 10:56:57] Set ATHENA_PROC_NUMBER=8
[2025-11-23 10:56:57] Set ATHENA_CORE_NUMBER=8
[2025-11-23 10:56:57] Starting ATLAS job with PandaID=6892527808
[2025-11-23 10:56:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:27:24]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:27:24] 2025-11-24 03:26:35,647 | INFO     | time since job start (41313s) is within the limit (172800.0s)
[2025-11-23 22:27:24] 2025-11-24 03:26:36,383 | INFO     | monitor loop #2401: job 0:6892527808 is in state 'finished'
[2025-11-23 22:27:24] 2025-11-24 03:26:36,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:27:24] 2025-11-24 03:26:37,669 | INFO     | time since job start (41315s) is within the limit (172800.0s)
[2025-11-23 22:27:24] 2025-11-24 03:26:38,914 | INFO     | monitor loop #2402: job 0:6892527808 is in state 'finished'
[2025-11-23 22:27:24] 2025-11-24 03:26:38,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:27:24] 2025-11-24 03:26:39,676 | INFO     | time since job start (41317s) is within the limit (172800.0s)
[2025-11-23 22:27:24] 2025-11-24 03:26:39,676 | INFO     | 41326s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-23 22:27:24] 2025-11-24 03:26:41,419 | INFO     | monitor loop #2403: job 0:6892527808 is in state 'finished'
[2025-11-23 22:27:24] 2025-11-24 03:26:41,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:27:24] 2025-11-24 03:26:41,700 | INFO     | time since job start (41319s) is within the limit (172800.0s)
[2025-11-23 22:27:24] 2025-11-24 03:26:43,711 | INFO     | time since job start (41321s) is within the limit (172800.0s)
[2025-11-23 22:27:24] 2025-11-24 03:26:43,965 | INFO     | monitor loop #2404: job 0:6892527808 is in state 'finished'
[2025-11-23 22:27:24] 2025-11-24 03:26:43,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:27:24] 2025-11-24 03:26:45,718 | INFO     | time since job start (41323s) is within the limit (172800.0s)
[2025-11-23 22:27:24] 2025-11-24 03:26:46,225 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 22:27:24] 2025-11-24 03:26:46,234 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3782.921359375
[2025-11-23 22:27:24] 2025-11-24 03:26:46,259 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892527808/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:27:24] 2025-11-24 03:26:46,260 | INFO     | extracted standard info from prmon json
[2025-11-23 22:27:24] 2025-11-24 03:26:46,260 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:27:24] 2025-11-24 03:26:46,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:27:24] 2025-11-24 03:26:46,277 | INFO     | fitting pss+swap vs Time
[2025-11-23 22:27:24] 2025-11-24 03:26:46,279 | INFO     | sum of square deviations: 95359523838.47974
[2025-11-23 22:27:24] 2025-11-24 03:26:46,311 | INFO     | sum of deviations: 60232822141.319725
[2025-11-23 22:27:24] 2025-11-24 03:26:46,311 | INFO     | mean x: 1763934163.52
[2025-11-23 22:27:24] 2025-11-24 03:26:46,311 | INFO     | mean y: 2748772.642962963
[2025-11-23 22:27:24] 2025-11-24 03:26:46,311 | INFO     | intersect: -1111421353.8800972
[2025-11-23 22:27:24] 2025-11-24 03:26:46,312 | INFO     | chi2: 31.711325701301895
[2025-11-23 22:27:24] 2025-11-24 03:26:46,312 | INFO     | sum of square deviations: 93256271734.34184
[2025-11-23 22:27:24] 2025-11-24 03:26:46,352 | INFO     | sum of deviations: 273395337879.29996
[2025-11-23 22:27:24] 2025-11-24 03:26:46,366 | INFO     | mean x: 1763934011.0313432
[2025-11-23 22:27:24] 2025-11-24 03:26:46,366 | INFO     | mean y: 2764222.223880597
[2025-11-23 22:27:24] 2025-11-24 03:26:46,366 | INFO     | intersect: -5168484059.248138
[2025-11-23 22:27:24] 2025-11-24 03:26:46,366 | INFO     | chi2: 27.988744984366132
[2025-11-23 22:27:24] 2025-11-24 03:26:46,366 | INFO     | current chi2=27.988744984366132 (change=11.738962766803956 %)
[2025-11-23 22:27:24] 2025-11-24 03:26:46,367 | INFO     | right removable region: 669
[2025-11-23 22:27:24] 2025-11-24 03:26:46,367 | INFO     | sum of square deviations: 93255645874.34193
[2025-11-23 22:27:24] 2025-11-24 03:26:46,386 | INFO     | sum of deviations: -175172591200.2807
[2025-11-23 22:27:24] 2025-11-24 03:26:46,387 | INFO     | mean x: 1763934316.0313432
[2025-11-23 22:27:24] 2025-11-24 03:26:46,387 | INFO     | mean y: 2765828.489552239
[2025-11-23 22:27:24] 2025-11-24 03:26:46,387 | INFO     | intersect: 3316162480.770104
[2025-11-23 22:27:24] 2025-11-24 03:26:46,387 | INFO     | chi2: 28.443209419861684
[2025-11-23 22:27:24] 2025-11-24 03:26:46,387 | INFO     | current chi2=28.443209419861684 (change=10.305833039663932 %)
[2025-11-23 22:27:24] 2025-11-24 03:26:46,387 | INFO     | left removable region: 10
[2025-11-23 22:27:24] 2025-11-24 03:26:46,388 | INFO     | sum of square deviations: 88737233016.61584
[2025-11-23 22:27:24] 2025-11-24 03:26:46,443 | INFO     | sum of deviations: -133194782125.53723
[2025-11-23 22:27:24] 2025-11-24 03:26:46,443 | INFO     | mean x: 1763934285.5569043
[2025-11-23 22:27:24] 2025-11-24 03:26:46,443 | INFO     | mean y: 2800352.8543247343
[2025-11-23 22:27:24] 2025-11-24 03:26:46,443 | INFO     | intersect: 2650469599.0266027
[2025-11-23 22:27:24] 2025-11-24 03:26:46,444 | INFO     | chi2: 21.436247908496714
[2025-11-23 22:27:24] 2025-11-24 03:26:46,444 | INFO     | current memory leak: -1.50 B/s (using 659 data points, chi2=21.44)
[2025-11-23 22:27:24] 2025-11-24 03:26:46,444 | INFO     | could have reported an average CPU frequency of 3759 MHz (26 samples)
[2025-11-23 22:27:24] 2025-11-24 03:26:46,445 | INFO     | ..............................
[2025-11-23 22:27:24] 2025-11-24 03:26:46,445 | INFO     | . Timing measurements:
[2025-11-23 22:27:24] 2025-11-24 03:26:46,445 | INFO     | . get job = 0 s
[2025-11-23 22:27:24] 2025-11-24 03:26:46,445 | INFO     | . initial setup = 8 s
[2025-11-23 22:27:24] 2025-11-24 03:26:46,445 | INFO     | . payload setup = 35 s
[2025-11-23 22:27:24] 2025-11-24 03:26:46,445 | INFO     | . stage-in = 0 s
[2025-11-23 22:27:24] 2025-11-24 03:26:46,445 | INFO     | . payload execution = 41176 s
[2025-11-23 22:27:24] 2025-11-24 03:26:46,445 | INFO     | . stage-out = 10 s
[2025-11-23 22:27:24] 2025-11-24 03:26:46,445 | INFO     | . log creation = 3 s
[2025-11-23 22:27:24] 2025-11-24 03:26:46,445 | INFO     | ..............................
[2025-11-23 22:27:24] 2025-11-24 03:26:46,474 | INFO     | monitor loop #2405: job 0:6892527808 is in state 'finished'
[2025-11-23 22:27:24] 2025-11-24 03:26:46,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | 
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | job summary report
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | --------------------------------------------------
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | PanDA job id: 6892527808
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | task id: 47493029
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | errors: (none)
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | pilot state: finished 
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | transexitcode: 0
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | exeerrorcode: 0
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | exeerrordiag: 
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | exitcode: 0
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | exitmsg: OK
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | cpuconsumptiontime: 141019 s
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | nevents: 1000
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | neventsw: 0
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | pid: 526115
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | pgrp: 526115
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | corecount: 8
[2025-11-23 22:27:24] 2025-11-24 03:26:47,290 | INFO     | event service: False
[2025-11-23 22:27:24] 2025-11-24 03:26:47,291 | INFO     | sizes: {0: 2297968, 1: 2298824, 2: 2298824, 12: 2298852, 23: 2298880, 27: 2299170, 34: 2299326, 41216: 2342997, 41228: 2351991, 41230: 2352047, 41264: 2352293}
[2025-11-23 22:27:24] 2025-11-24 03:26:47,291 | INFO     | --------------------------------------------------
[2025-11-23 22:27:24] 2025-11-24 03:26:47,291 | INFO     | 
[2025-11-23 22:27:24] 2025-11-24 03:26:47,319 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 22:27:24] 2025-11-24 03:26:47,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | job 6892527808 has completed (purged errors)
[2025-11-23 22:27:24] 2025-11-24 03:26:47,398 | INFO     | overall cleanup function is called
[2025-11-23 22:27:24] 2025-11-24 03:26:48,467 | INFO     | --- collectZombieJob: --- 10, [526115]
[2025-11-23 22:27:24] 2025-11-24 03:26:48,467 | INFO     | zombie collector waiting for pid 526115
[2025-11-23 22:27:24] 2025-11-24 03:26:48,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:27:24] 2025-11-24 03:26:48,467 | INFO     | collected zombie processes
[2025-11-23 22:27:24] 2025-11-24 03:26:48,467 | INFO     | will attempt to kill all subprocesses of pid=526115
[2025-11-23 22:27:24] 2025-11-24 03:26:51,256 | INFO     | process IDs to be killed: [526115] (in reverse order)
[2025-11-23 22:27:24] 2025-11-24 03:26:51,597 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:27:24] 2025-11-24 03:26:51,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:27:24] 2025-11-24 03:26:51,706 | INFO     | did not find any defunct processes belonging to 526115
[2025-11-23 22:27:24] 2025-11-24 03:26:51,755 | INFO     | did not find any defunct processes belonging to 526115
[2025-11-23 22:27:24] 2025-11-24 03:26:51,758 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:27:24] 2025-11-24 03:26:51,758 | INFO     | ready for new job
[2025-11-23 22:27:24] 2025-11-24 03:26:51,758 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:27:24] 2025-11-24 03:26:51,774 | INFO     | ***************************************
[2025-11-23 22:27:24] 2025-11-24 03:26:51,774 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:27:24] 2025-11-24 03:26:51,774 | INFO     | ***************************************
[2025-11-23 22:27:24] 2025-11-24 03:26:51,774 | INFO     | 
[2025-11-23 22:27:24] 2025-11-24 03:26:51,779 | INFO     | architecture information:
[2025-11-23 22:27:24] 2025-11-24 03:26:51,798 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:27:24] 2025-11-24 03:26:51,867 | INFO     | cat /etc/os-release:
[2025-11-23 22:27:24] NAME="CentOS Linux"
[2025-11-23 22:27:24] VERSION="7 (Core)"
[2025-11-23 22:27:24] ID="centos"
[2025-11-23 22:27:24] ID_LIKE="rhel fedora"
[2025-11-23 22:27:24] VERSION_ID="7"
[2025-11-23 22:27:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:27:24] ANSI_COLOR="0;31"
[2025-11-23 22:27:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:27:24] HOME_URL="https://www.centos.org/"
[2025-11-23 22:27:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:27:24] 
[2025-11-23 22:27:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:27:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:27:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:27:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:27:24] 
[2025-11-23 22:27:24] 2025-11-24 03:26:51,868 | INFO     | ***************************************
[2025-11-23 22:27:24] 2025-11-24 03:26:52,373 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 22:27:24] 2025-11-24 03:26:52,437 | INFO     | sufficient remaining disk space (163432103936 B)
[2025-11-23 22:27:24] 2025-11-24 03:26:52,437 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:27:24] 2025-11-24 03:26:52,437 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:27:24] 2025-11-24 03:26:52,437 | INFO     | update_server=False
[2025-11-23 22:27:24] 2025-11-24 03:26:52,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:27:24] 2025-11-24 03:26:52,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:27:24] 2025-11-24 03:26:52,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:27:24] 2025-11-24 03:26:52,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:27:24] 2025-11-24 03:26:52,594 | INFO     | aborting loop
[2025-11-23 22:27:24] 2025-11-24 03:26:52,633 | INFO     | all job control threads have been joined
[2025-11-23 22:27:24] 2025-11-24 03:26:52,998 | INFO     | all payload control threads have been joined
[2025-11-23 22:27:24] 2025-11-24 03:26:53,443 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:53,444 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:53,514 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:53,555 | INFO     | all data control threads have been joined
[2025-11-23 22:27:24] 2025-11-24 03:26:53,600 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:53,639 | INFO     | [job] control thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,004 | INFO     | [payload] control thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,039 | INFO     | [job] validate thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,039 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,039 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,040 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,287 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,445 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,477 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,561 | INFO     | [data] control thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:26:54,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:27:24] 2025-11-24 03:26:58,825 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:27:24] 2025-11-24 03:27:15,055 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:27:24] 2025-11-24 03:27:16,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588117751616)>', '<ExcThread(monitor, started 140587625867008)>']
[2025-11-23 22:27:24] 2025-11-24 03:27:20,642 | INFO     | PID=507956 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 22:27:24] 2025-11-24 03:27:20,642 | INFO     | .. there are 34 such processes running
[2025-11-23 22:27:24] 2025-11-24 03:27:20,642 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:27:24] 2025-11-24 03:27:20,642 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:27:24] 2025-11-24 03:27:20,642 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:27:24] 2025-11-24 03:27:20,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:27:24] 2025-11-24 03:27:20,642 | INFO     | [monitor] control thread has ended
[2025-11-23 22:27:24] 2025-11-24 03:27:21,943 | INFO     | all workflow threads have been joined
[2025-11-23 22:27:24] 2025-11-24 03:27:21,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:27:24] 2025-11-24 03:27:21,943 | INFO     | traces error code: 0
[2025-11-23 22:27:24] 2025-11-24 03:27:21,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:27:24] 2025-11-24 03:27:22,359 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:27:24] 2025-11-24 03:27:22,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:27:24] 2025-11-24 03:27:22,406 [wrapper] pilotpid: 507956
[2025-11-23 22:27:24] 2025-11-24 03:27:22,428 [wrapper] Pilot exit status: 0
[2025-11-23 22:27:24] 2025-11-24 03:27:22,539 [wrapper] pandaids: 6892527808
[2025-11-23 22:27:24] 2025-11-24 03:27:23,114 [wrapper] cleanup supervisor_pilot   88926 507957
[2025-11-23 22:27:24] 2025-11-24 03:27:23,137 [wrapper] Test setup, not cleaning
[2025-11-23 22:27:24] 2025-11-24 03:27:23,166 [wrapper] apfmon messages muted
[2025-11-23 22:27:24] 2025-11-24 03:27:23,184 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:27:24] 2025-11-24 03:27:23,242 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:27:24]  *** Error codes and diagnostics ***
[2025-11-23 22:27:24]     "exeErrorCode": 0,
[2025-11-23 22:27:24]     "exeErrorDiag": "",
[2025-11-23 22:27:24]     "pilotErrorCode": 0,
[2025-11-23 22:27:24]     "pilotErrorDiag": "",
[2025-11-23 22:27:24]  *** Listing of results directory ***
[2025-11-23 22:27:24] total 1316368
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-23 22:27:24] -rwx------. 1 boincer umatlas     36292 Nov 19 02:11 runpilot2-wrapper.sh
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 02:12 queuedata.json
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas       100 Nov 23 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:27:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 10:56 run_atlas
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas       105 Nov 23 10:56 job.xml
[2025-11-23 22:27:24] -rw-r--r--. 2 boincer umatlas 408186202 Nov 23 10:56 EVNT.47493027._000138.pool.root.1
[2025-11-23 22:27:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 10:56 shared
[2025-11-23 22:27:24] -rw-r--r--. 2 boincer umatlas    590094 Nov 23 10:56 input.tar.gz
[2025-11-23 22:27:24] -rw-r--r--. 2 boincer umatlas     15120 Nov 23 10:56 start_atlas.sh
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas         0 Nov 23 10:56 boinc_lockfile
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas      2773 Nov 23 10:56 pandaJob.out
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas    989785 Nov 23 10:57 agis_schedconf.cvmfs.json
[2025-11-23 22:27:24] drwx------. 5 boincer umatlas      4096 Nov 23 10:58 pilot3
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas       533 Nov 23 21:49 boinc_task_state.xml
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas      7176 Nov 23 22:18 init_data.xml
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas 921847965 Nov 23 22:24 HITS.47493029._001332.pool.root.1
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas      1077 Nov 23 22:25 memory_monitor_summary.json
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas   1526164 Nov 23 22:26 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas   1889508 Nov 23 22:26 log.47493029._001332.job.log.tgz.1
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas        95 Nov 23 22:26 pilot_heartbeat.json
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas      8643 Nov 23 22:26 heartbeat.json
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 22:27 boinc_mmap_file
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas      4824 Nov 23 22:27 pilotlog.txt
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas        29 Nov 23 22:27 wrapper_checkpoint.txt
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas   5110442 Nov 23 22:27 log.47493029._001332.job.log.1
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas       353 Nov 23 22:27 output.list
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas       620 Nov 23 22:27 runtime_log
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas   7024640 Nov 23 22:27 result.tar.gz
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas      8704 Nov 23 22:27 runtime_log.err
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas       666 Nov 23 22:27 jMJKDmHXrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpkGKDmKOLEwm.diag
[2025-11-23 22:27:24] -rw-r--r--. 1 boincer umatlas     21819 Nov 23 22:27 stderr.txt
[2025-11-23 22:27:24] HITS file was successfully produced:
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas 921847965 Nov 23 22:24 shared/HITS.pool.root.1
[2025-11-23 22:27:24]  *** Contents of shared directory: ***
[2025-11-23 22:27:24] total 1306328
[2025-11-23 22:27:24] -rw-r--r--. 2 boincer umatlas 408186202 Nov 23 10:56 ATLAS.root_0
[2025-11-23 22:27:24] -rw-r--r--. 2 boincer umatlas    590094 Nov 23 10:56 input.tar.gz
[2025-11-23 22:27:24] -rw-r--r--. 2 boincer umatlas     15120 Nov 23 10:56 start_atlas.sh
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas 921847965 Nov 23 22:24 HITS.pool.root.1
[2025-11-23 22:27:24] -rw-------. 1 boincer umatlas   7024640 Nov 23 22:27 result.tar.gz
22:27:25 (502750): run_atlas exited; CPU time 141327.515279
22:27:25 (502750): called boinc_finish(0)

</stderr_txt>
]]>

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