Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:00:29 (15185): wrapper (7.7.26015): starting
08:00:29 (15185): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 08:00:29] Arguments: --nthreads 12
[2025-11-23 08:00:29] Threads: 12
[2025-11-23 08:00:29] Checking for CVMFS
[2025-11-23 08:00:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:00:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:00:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:00:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:00:29] 2.11.2.0 3081 283347 95272 153209 1 81 13620208 20275200 1 130560 1 127709964 99.965 16708081 14261 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 08:00:29] CVMFS is ok
[2025-11-23 08:00:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:00:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:00:29] Further information can be found at the LHC@home message board.
[2025-11-23 08:00:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:00:29] Checking for apptainer binary...
[2025-11-23 08:00:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:00:29] Running /usr/bin/apptainer --version
[2025-11-23 08:00:29] apptainer version 1.3.2-1.el7
[2025-11-23 08:00:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:00:31] c-205-29.aglt2.org
[2025-11-23 08:00:31] apptainer works
[2025-11-23 08:00:31] Set ATHENA_PROC_NUMBER=12
[2025-11-23 08:00:31] Set ATHENA_CORE_NUMBER=12
[2025-11-23 08:00:31] Starting ATLAS job with PandaID=6895343153
[2025-11-23 08:00:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:05:37]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:05:37] 2025-11-23 20:05:01,834 | INFO     | time since job start (25455s) is within the limit (172800.0s)
[2025-11-23 15:05:37] 2025-11-23 20:05:02,127 | INFO     | monitor loop #1907: job 0:6895343153 is in state 'finished'
[2025-11-23 15:05:37] 2025-11-23 20:05:02,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 15:05:37] 2025-11-23 20:05:03,838 | INFO     | time since job start (25457s) is within the limit (172800.0s)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,077 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 15:05:37] 2025-11-23 20:05:04,081 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-23 15:05:37] 2025-11-23 20:05:04,083 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895343153/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,084 | INFO     | extracted standard info from prmon json
[2025-11-23 15:05:37] 2025-11-23 20:05:04,084 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:05:37] 2025-11-23 20:05:04,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:05:37] 2025-11-23 20:05:04,091 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:05:37] 2025-11-23 20:05:04,092 | INFO     | sum of square deviations: 22484637992.65221
[2025-11-23 15:05:37] 2025-11-23 20:05:04,095 | INFO     | sum of deviations: 373174472214.50604
[2025-11-23 15:05:37] 2025-11-23 20:05:04,095 | INFO     | mean x: 1763915564.141487
[2025-11-23 15:05:37] 2025-11-23 20:05:04,096 | INFO     | mean y: 3423597.635491607
[2025-11-23 15:05:37] 2025-11-23 20:05:04,096 | INFO     | intersect: -29272042607.09336
[2025-11-23 15:05:37] 2025-11-23 20:05:04,096 | INFO     | chi2: 5.942690591304304
[2025-11-23 15:05:37] 2025-11-23 20:05:04,097 | INFO     | sum of square deviations: 21685515422.55095
[2025-11-23 15:05:37] 2025-11-23 20:05:04,100 | INFO     | sum of deviations: 542800683286.9949
[2025-11-23 15:05:37] 2025-11-23 20:05:04,100 | INFO     | mean x: 1763915411.643204
[2025-11-23 15:05:37] 2025-11-23 20:05:04,101 | INFO     | mean y: 3455957.0339805824
[2025-11-23 15:05:37] 2025-11-23 20:05:04,101 | INFO     | intersect: -44148341777.26045
[2025-11-23 15:05:37] 2025-11-23 20:05:04,101 | INFO     | chi2: 2.550751199664549
[2025-11-23 15:05:37] 2025-11-23 20:05:04,101 | INFO     | current chi2=2.550751199664549 (change=57.077502850359416 %)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,102 | INFO     | sum of square deviations: 20905531113.734623
[2025-11-23 15:05:37] 2025-11-23 20:05:04,105 | INFO     | sum of deviations: 568601821680.0096
[2025-11-23 15:05:37] 2025-11-23 20:05:04,105 | INFO     | mean x: 1763915259.1425061
[2025-11-23 15:05:37] 2025-11-23 20:05:04,105 | INFO     | mean y: 3460956.068796069
[2025-11-23 15:05:37] 2025-11-23 20:05:04,106 | INFO     | intersect: -47972618875.67783
[2025-11-23 15:05:37] 2025-11-23 20:05:04,106 | INFO     | chi2: 2.261950008016103
[2025-11-23 15:05:37] 2025-11-23 20:05:04,106 | INFO     | current chi2=2.261950008016103 (change=11.322201541507706 %)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,106 | INFO     | right removable region: 406
[2025-11-23 15:05:37] 2025-11-23 20:05:04,107 | INFO     | sum of square deviations: 21685479432.550953
[2025-11-23 15:05:37] 2025-11-23 20:05:04,110 | INFO     | sum of deviations: 247234274743.88086
[2025-11-23 15:05:37] 2025-11-23 20:05:04,110 | INFO     | mean x: 1763915716.643204
[2025-11-23 15:05:37] 2025-11-23 20:05:04,111 | INFO     | mean y: 3447541.3325242717
[2025-11-23 15:05:37] 2025-11-23 20:05:04,111 | INFO     | intersect: -20106802926.96045
[2025-11-23 15:05:37] 2025-11-23 20:05:04,111 | INFO     | chi2: 3.84971263608151
[2025-11-23 15:05:37] 2025-11-23 20:05:04,111 | INFO     | current chi2=3.84971263608151 (change=35.21936609463335 %)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,112 | INFO     | sum of square deviations: 20905484022.44725
[2025-11-23 15:05:37] 2025-11-23 20:05:04,115 | INFO     | sum of deviations: 216786577686.86273
[2025-11-23 15:05:37] 2025-11-23 20:05:04,115 | INFO     | mean x: 1763915869.144963
[2025-11-23 15:05:37] 2025-11-23 20:05:04,116 | INFO     | mean y: 3453487.493857494
[2025-11-23 15:05:37] 2025-11-23 20:05:04,116 | INFO     | intersect: -18288076342.137924
[2025-11-23 15:05:37] 2025-11-23 20:05:04,116 | INFO     | chi2: 3.808337515971232
[2025-11-23 15:05:37] 2025-11-23 20:05:04,116 | INFO     | current chi2=3.808337515971232 (change=1.0747586643867637 %)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,116 | INFO     | left removable region: 20
[2025-11-23 15:05:37] 2025-11-23 20:05:04,117 | INFO     | sum of square deviations: 17833644523.222874
[2025-11-23 15:05:37] 2025-11-23 20:05:04,120 | INFO     | sum of deviations: 365588729358.3575
[2025-11-23 15:05:37] 2025-11-23 20:05:04,120 | INFO     | mean x: 1763915838.6373057
[2025-11-23 15:05:37] 2025-11-23 20:05:04,121 | INFO     | mean y: 3501405.766839378
[2025-11-23 15:05:37] 2025-11-23 20:05:04,121 | INFO     | intersect: -36156676021.94576
[2025-11-23 15:05:37] 2025-11-23 20:05:04,121 | INFO     | chi2: 0.0678700402647208
[2025-11-23 15:05:37] 2025-11-23 20:05:04,121 | INFO     | current memory leak: 20.50 B/s (using 386 data points, chi2=0.07)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,122 | INFO     | could have reported an average CPU frequency of 2374 MHz (18 samples)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,122 | INFO     | ..............................
[2025-11-23 15:05:37] 2025-11-23 20:05:04,122 | INFO     | . Timing measurements:
[2025-11-23 15:05:37] 2025-11-23 20:05:04,122 | INFO     | . get job = 0 s
[2025-11-23 15:05:37] 2025-11-23 20:05:04,122 | INFO     | . initial setup = 2 s
[2025-11-23 15:05:37] 2025-11-23 20:05:04,122 | INFO     | . payload setup = 7 s
[2025-11-23 15:05:37] 2025-11-23 20:05:04,122 | INFO     | . stage-in = 0 s
[2025-11-23 15:05:37] 2025-11-23 20:05:04,122 | INFO     | . payload execution = 25419 s
[2025-11-23 15:05:37] 2025-11-23 20:05:04,122 | INFO     | . stage-out = 3 s
[2025-11-23 15:05:37] 2025-11-23 20:05:04,123 | INFO     | . log creation = 0 s
[2025-11-23 15:05:37] 2025-11-23 20:05:04,123 | INFO     | ..............................
[2025-11-23 15:05:37] 2025-11-23 20:05:04,514 | INFO     | 
[2025-11-23 15:05:37] 2025-11-23 20:05:04,514 | INFO     | job summary report
[2025-11-23 15:05:37] 2025-11-23 20:05:04,514 | INFO     | --------------------------------------------------
[2025-11-23 15:05:37] 2025-11-23 20:05:04,514 | INFO     | PanDA job id: 6895343153
[2025-11-23 15:05:37] 2025-11-23 20:05:04,514 | INFO     | task id: 47556137
[2025-11-23 15:05:37] 2025-11-23 20:05:04,514 | INFO     | errors: (none)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,515 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:05:37] 2025-11-23 20:05:04,515 | INFO     | pilot state: finished 
[2025-11-23 15:05:37] 2025-11-23 20:05:04,515 | INFO     | transexitcode: 0
[2025-11-23 15:05:37] 2025-11-23 20:05:04,515 | INFO     | exeerrorcode: 0
[2025-11-23 15:05:37] 2025-11-23 20:05:04,515 | INFO     | exeerrordiag: 
[2025-11-23 15:05:37] 2025-11-23 20:05:04,516 | INFO     | exitcode: 0
[2025-11-23 15:05:37] 2025-11-23 20:05:04,516 | INFO     | exitmsg: OK
[2025-11-23 15:05:37] 2025-11-23 20:05:04,516 | INFO     | cpuconsumptiontime: 292218 s
[2025-11-23 15:05:37] 2025-11-23 20:05:04,516 | INFO     | nevents: 1000
[2025-11-23 15:05:37] 2025-11-23 20:05:04,516 | INFO     | neventsw: 0
[2025-11-23 15:05:37] 2025-11-23 20:05:04,516 | INFO     | pid: 25467
[2025-11-23 15:05:37] 2025-11-23 20:05:04,517 | INFO     | pgrp: 25467
[2025-11-23 15:05:37] 2025-11-23 20:05:04,517 | INFO     | corecount: 12
[2025-11-23 15:05:37] 2025-11-23 20:05:04,517 | INFO     | event service: False
[2025-11-23 15:05:37] 2025-11-23 20:05:04,517 | INFO     | sizes: {0: 2298755, 1: 2298755, 5: 2299045, 11: 2299101, 25430: 2336227, 25431: 2336226, 25434: 2345460, 25442: 2345650}
[2025-11-23 15:05:37] 2025-11-23 20:05:04,517 | INFO     | --------------------------------------------------
[2025-11-23 15:05:37] 2025-11-23 20:05:04,517 | INFO     | 
[2025-11-23 15:05:37] 2025-11-23 20:05:04,518 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 15:05:37] 2025-11-23 20:05:04,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,542 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,542 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,545 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,545 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:05:37] 2025-11-23 20:05:04,545 | INFO     | job 6895343153 has completed (purged errors)
[2025-11-23 15:05:37] 2025-11-23 20:05:04,546 | INFO     | overall cleanup function is called
[2025-11-23 15:05:37] 2025-11-23 20:05:05,560 | INFO     | --- collectZombieJob: --- 10, [25467]
[2025-11-23 15:05:37] 2025-11-23 20:05:05,560 | INFO     | zombie collector waiting for pid 25467
[2025-11-23 15:05:37] 2025-11-23 20:05:05,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:05:37] 2025-11-23 20:05:05,561 | INFO     | collected zombie processes
[2025-11-23 15:05:37] 2025-11-23 20:05:05,561 | INFO     | will attempt to kill all subprocesses of pid=25467
[2025-11-23 15:05:37] 2025-11-23 20:05:05,657 | INFO     | process IDs to be killed: [25467] (in reverse order)
[2025-11-23 15:05:37] 2025-11-23 20:05:05,709 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:05:37] 2025-11-23 20:05:05,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:05:37] 2025-11-23 20:05:05,713 | INFO     | did not find any defunct processes belonging to 25467
[2025-11-23 15:05:37] 2025-11-23 20:05:05,716 | INFO     | did not find any defunct processes belonging to 25467
[2025-11-23 15:05:37] 2025-11-23 20:05:05,718 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:05:37] 2025-11-23 20:05:05,718 | INFO     | ready for new job
[2025-11-23 15:05:37] 2025-11-23 20:05:05,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:05:37] 2025-11-23 20:05:05,721 | INFO     | ***************************************
[2025-11-23 15:05:37] 2025-11-23 20:05:05,721 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:05:37] 2025-11-23 20:05:05,721 | INFO     | ***************************************
[2025-11-23 15:05:37] 2025-11-23 20:05:05,721 | INFO     | 
[2025-11-23 15:05:37] 2025-11-23 20:05:05,722 | INFO     | architecture information:
[2025-11-23 15:05:37] 2025-11-23 20:05:05,722 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:05:37] 2025-11-23 20:05:05,737 | INFO     | cat /etc/os-release:
[2025-11-23 15:05:37] NAME="CentOS Linux"
[2025-11-23 15:05:37] VERSION="7 (Core)"
[2025-11-23 15:05:37] ID="centos"
[2025-11-23 15:05:37] ID_LIKE="rhel fedora"
[2025-11-23 15:05:37] VERSION_ID="7"
[2025-11-23 15:05:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:05:37] ANSI_COLOR="0;31"
[2025-11-23 15:05:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:05:37] HOME_URL="https://www.centos.org/"
[2025-11-23 15:05:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:05:37] 
[2025-11-23 15:05:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:05:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:05:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:05:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:05:37] 
[2025-11-23 15:05:37] 2025-11-23 20:05:05,737 | INFO     | ***************************************
[2025-11-23 15:05:37] 2025-11-23 20:05:06,240 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 15:05:37] 2025-11-23 20:05:06,258 | INFO     | sufficient remaining disk space (28248637440 B)
[2025-11-23 15:05:37] 2025-11-23 20:05:06,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:05:37] 2025-11-23 20:05:06,259 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:05:37] 2025-11-23 20:05:06,259 | INFO     | update_server=False
[2025-11-23 15:05:37] 2025-11-23 20:05:06,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:05:37] 2025-11-23 20:05:06,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:05:37] 2025-11-23 20:05:06,260 | INFO     | aborting loop
[2025-11-23 15:05:37] 2025-11-23 20:05:06,424 | INFO     | all payload control threads have been joined
[2025-11-23 15:05:37] 2025-11-23 20:05:06,708 | INFO     | all data control threads have been joined
[2025-11-23 15:05:37] 2025-11-23 20:05:07,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:05:37] 2025-11-23 20:05:07,264 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:07,265 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:07,344 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:07,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:05:37] 2025-11-23 20:05:07,428 | INFO     | [payload] control thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:07,625 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:07,713 | INFO     | [data] control thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:07,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:07,829 | INFO     | all job control threads have been joined
[2025-11-23 15:05:37] 2025-11-23 20:05:08,074 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:08,165 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:08,379 | INFO     | [job] validate thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:08,579 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:08,608 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:08,830 | INFO     | [job] control thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:09,080 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:09,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:05:37] 2025-11-23 20:05:10,221 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:11,403 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:05:37] 2025-11-23 20:05:27,654 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:05:37] 2025-11-23 20:05:27,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279556917056)>', '<ExcThread(monitor, started 140278505654016)>']
[2025-11-23 15:05:37] 2025-11-23 20:05:32,774 | INFO     | all workflow threads have been joined
[2025-11-23 15:05:37] 2025-11-23 20:05:32,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:05:37] 2025-11-23 20:05:32,782 | INFO     | traces error code: 0
[2025-11-23 15:05:37] 2025-11-23 20:05:32,783 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:05:37] 2025-11-23 20:05:37,046 | INFO     | PID=18982 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 15:05:37] 2025-11-23 20:05:37,046 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:05:37] 2025-11-23 20:05:37,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:05:37] 2025-11-23 20:05:37,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:05:37] 2025-11-23 20:05:37,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:05:37] 2025-11-23 20:05:37,046 | INFO     | [monitor] control thread has ended
[2025-11-23 15:05:37] 2025-11-23 20:05:37,144 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:05:37] 2025-11-23 20:05:37,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:05:37] 2025-11-23 20:05:37,152 [wrapper] pilotpid: 18982
[2025-11-23 15:05:37] 2025-11-23 20:05:37,155 [wrapper] Pilot exit status: 0
[2025-11-23 15:05:37] 2025-11-23 20:05:37,170 [wrapper] pandaids: 6895343153
[2025-11-23 15:05:37] 2025-11-23 20:05:37,210 [wrapper] cleanup supervisor_pilot 10156 18983
[2025-11-23 15:05:37] 2025-11-23 20:05:37,214 [wrapper] Test setup, not cleaning
[2025-11-23 15:05:37] 2025-11-23 20:05:37,218 [wrapper] apfmon messages muted
[2025-11-23 15:05:37] 2025-11-23 20:05:37,222 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:05:37] 2025-11-23 20:05:37,225 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:05:37]  *** Error codes and diagnostics ***
[2025-11-23 15:05:37]     "exeErrorCode": 0,
[2025-11-23 15:05:37]     "exeErrorDiag": "",
[2025-11-23 15:05:37]     "pilotErrorCode": 0,
[2025-11-23 15:05:37]     "pilotErrorDiag": "",
[2025-11-23 15:05:37]  *** Listing of results directory ***
[2025-11-23 15:05:37] total 1312948
[2025-11-23 15:05:37] -rwx------ 1 boincer umatlas     36292 Nov 22 10:48 runpilot2-wrapper.sh
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 10:48 queuedata.json
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 10:48 pilot3.tar.gz
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas       100 Nov 23 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:05:37] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 08:00 run_atlas
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas       105 Nov 23 08:00 job.xml
[2025-11-23 15:05:37] -rw-r--r-- 2 boincer umatlas 409517262 Nov 23 08:00 EVNT.47483658._000415.pool.root.1
[2025-11-23 15:05:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 08:00 start_atlas.sh
[2025-11-23 15:05:37] drwxrwx--x 2 boincer umatlas      4096 Nov 23 08:00 shared
[2025-11-23 15:05:37] -rw-r--r-- 2 boincer umatlas    590095 Nov 23 08:00 input.tar.gz
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas         0 Nov 23 08:00 boinc_lockfile
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 08:00 pandaJob.out
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas        57 Nov 23 08:00 setup.sh.local
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas    989784 Nov 23 08:00 agis_schedconf.cvmfs.json
[2025-11-23 15:05:37] drwx------ 5 boincer umatlas      4096 Nov 23 08:00 pilot3
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas       533 Nov 23 14:56 boinc_task_state.xml
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas      5955 Nov 23 15:03 init_data.xml
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas 919549623 Nov 23 15:04 HITS.47556137._004110.pool.root.1
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas      1061 Nov 23 15:04 memory_monitor_summary.json
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas        95 Nov 23 15:04 pilot_heartbeat.json
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas   1526164 Nov 23 15:04 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas   2175198 Nov 23 15:04 log.47556137._004110.job.log.tgz.1
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas      8656 Nov 23 15:05 heartbeat.json
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 15:05 boinc_mmap_file
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas        29 Nov 23 15:05 wrapper_checkpoint.txt
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas       745 Nov 23 15:05 pilotlog.txt
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas   3562411 Nov 23 15:05 log.47556137._004110.job.log.1
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas       353 Nov 23 15:05 output.list
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas       620 Nov 23 15:05 runtime_log
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas   5754880 Nov 23 15:05 result.tar.gz
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 15:05 runtime_log.err
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas       670 Nov 23 15:05 JeENDmv14g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPAIKDmRR3Mkn.diag
[2025-11-23 15:05:37] -rw-r--r-- 1 boincer umatlas     21315 Nov 23 15:05 stderr.txt
[2025-11-23 15:05:37] HITS file was successfully produced:
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas 919549623 Nov 23 15:04 shared/HITS.pool.root.1
[2025-11-23 15:05:37]  *** Contents of shared directory: ***
[2025-11-23 15:05:37] total 1304140
[2025-11-23 15:05:37] -rw-r--r-- 2 boincer umatlas 409517262 Nov 23 08:00 ATLAS.root_0
[2025-11-23 15:05:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 08:00 start_atlas.sh
[2025-11-23 15:05:37] -rw-r--r-- 2 boincer umatlas    590095 Nov 23 08:00 input.tar.gz
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas 919549623 Nov 23 15:04 HITS.pool.root.1
[2025-11-23 15:05:37] -rw------- 1 boincer umatlas   5754880 Nov 23 15:05 result.tar.gz
15:05:38 (15185): run_atlas exited; CPU time 285684.288987
15:05:38 (15185): called boinc_finish(0)

</stderr_txt>
]]>

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