Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:22:48 (21960): wrapper (7.7.26015): starting
08:22:48 (21960): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 08:22:48] Arguments: --nthreads 8
[2025-11-23 08:22:48] Threads: 8
[2025-11-23 08:22:48] Checking for CVMFS
[2025-11-23 08:22:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:22:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:22:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:22:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:22:48] 2.11.2.0 2830 44599 80380 153210 3 80 12335819 20275200 1 130560 0 7620648 99.686 2861305 27049 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 08:22:48] CVMFS is ok
[2025-11-23 08:22:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:22:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:22:48] Further information can be found at the LHC@home message board.
[2025-11-23 08:22:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:22:48] Checking for apptainer binary...
[2025-11-23 08:22:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:22:48] Running /usr/bin/apptainer --version
[2025-11-23 08:22:48] apptainer version 1.3.2-1.el7
[2025-11-23 08:22:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:22:50] c-204-5.aglt2.org
[2025-11-23 08:22:50] apptainer works
[2025-11-23 08:22:50] Set ATHENA_PROC_NUMBER=8
[2025-11-23 08:22:50] Set ATHENA_CORE_NUMBER=8
[2025-11-23 08:22:50] Starting ATLAS job with PandaID=6895343165
[2025-11-23 08:22:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 21:02:29]  *** The last 200 lines of the pilot log: ***
[2025-11-23 21:02:29] 2025-11-24 02:01:39,855 | INFO     | extracted standard info from prmon json
[2025-11-23 21:02:29] 2025-11-24 02:01:39,855 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 21:02:29] 2025-11-24 02:01:39,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 21:02:29] 2025-11-24 02:01:39,869 | INFO     | fitting pss+swap vs Time
[2025-11-23 21:02:29] 2025-11-24 02:01:39,870 | INFO     | sum of square deviations: 128734557111.40636
[2025-11-23 21:02:29] 2025-11-24 02:01:39,882 | INFO     | sum of deviations: 727106293393.6691
[2025-11-23 21:02:29] 2025-11-24 02:01:39,882 | INFO     | mean x: 1763926942.1246648
[2025-11-23 21:02:29] 2025-11-24 02:01:39,882 | INFO     | mean y: 2953519.175603217
[2025-11-23 21:02:29] 2025-11-24 02:01:39,882 | INFO     | intersect: -9959891030.758022
[2025-11-23 21:02:29] 2025-11-24 02:01:39,883 | INFO     | chi2: 6.1839693029686496
[2025-11-23 21:02:29] 2025-11-24 02:01:39,884 | INFO     | sum of square deviations: 126163516146.94206
[2025-11-23 21:02:29] 2025-11-24 02:01:39,896 | INFO     | sum of deviations: 959594663699.4286
[2025-11-23 21:02:29] 2025-11-24 02:01:39,896 | INFO     | mean x: 1763926789.6288798
[2025-11-23 21:02:29] 2025-11-24 02:01:39,896 | INFO     | mean y: 2967297.503373819
[2025-11-23 21:02:29] 2025-11-24 02:01:39,896 | INFO     | intersect: -13413389397.192028
[2025-11-23 21:02:29] 2025-11-24 02:01:39,897 | INFO     | chi2: 3.5013665908836957
[2025-11-23 21:02:29] 2025-11-24 02:01:39,897 | INFO     | current chi2=3.5013665908836957 (change=43.37994871347688 %)
[2025-11-23 21:02:29] 2025-11-24 02:01:39,898 | INFO     | sum of square deviations: 123626940944.95114
[2025-11-23 21:02:29] 2025-11-24 02:01:39,910 | INFO     | sum of deviations: 1091039062938.6005
[2025-11-23 21:02:29] 2025-11-24 02:01:39,910 | INFO     | mean x: 1763926637.1331522
[2025-11-23 21:02:29] 2025-11-24 02:01:39,910 | INFO     | mean y: 2975198.504076087
[2025-11-23 21:02:29] 2025-11-24 02:01:39,910 | INFO     | intersect: -15564124096.844032
[2025-11-23 21:02:29] 2025-11-24 02:01:39,911 | INFO     | chi2: 2.5900650903626588
[2025-11-23 21:02:29] 2025-11-24 02:01:39,911 | INFO     | current chi2=2.5900650903626588 (change=26.02702335978585 %)
[2025-11-23 21:02:29] 2025-11-24 02:01:39,912 | INFO     | sum of square deviations: 121124554291.20648
[2025-11-23 21:02:29] 2025-11-24 02:01:39,923 | INFO     | sum of deviations: 1097245803800.7361
[2025-11-23 21:02:29] 2025-11-24 02:01:39,923 | INFO     | mean x: 1763926484.6361148
[2025-11-23 21:02:29] 2025-11-24 02:01:39,924 | INFO     | mean y: 2975572.5554035567
[2025-11-23 21:02:29] 2025-11-24 02:01:39,924 | INFO     | intersect: -15976120860.912117
[2025-11-23 21:02:29] 2025-11-24 02:01:39,924 | INFO     | chi2: 2.547608126062342
[2025-11-23 21:02:29] 2025-11-24 02:01:39,925 | INFO     | current chi2=2.547608126062342 (change=1.6392238348871668 %)
[2025-11-23 21:02:29] 2025-11-24 02:01:39,925 | INFO     | right removable region: 730
[2025-11-23 21:02:29] 2025-11-24 02:01:39,925 | INFO     | sum of square deviations: 126163277149.1983
[2025-11-23 21:02:29] 2025-11-24 02:01:39,937 | INFO     | sum of deviations: 511780579001.8013
[2025-11-23 21:02:29] 2025-11-24 02:01:39,937 | INFO     | mean x: 1763927094.6275303
[2025-11-23 21:02:29] 2025-11-24 02:01:39,937 | INFO     | mean y: 2966268.705802969
[2025-11-23 21:02:29] 2025-11-24 02:01:39,937 | INFO     | intersect: -7152393438.20697
[2025-11-23 21:02:29] 2025-11-24 02:01:39,938 | INFO     | chi2: 3.7890357996942043
[2025-11-23 21:02:29] 2025-11-24 02:01:39,938 | INFO     | current chi2=3.7890357996942043 (change=38.72809494906036 %)
[2025-11-23 21:02:29] 2025-11-24 02:01:39,939 | INFO     | sum of square deviations: 123626598553.24887
[2025-11-23 21:02:29] 2025-11-24 02:01:39,950 | INFO     | sum of deviations: 467003307275.1073
[2025-11-23 21:02:29] 2025-11-24 02:01:39,951 | INFO     | mean x: 1763927247.1263587
[2025-11-23 21:02:29] 2025-11-24 02:01:39,951 | INFO     | mean y: 2968959.2676630435
[2025-11-23 21:02:29] 2025-11-24 02:01:39,951 | INFO     | intersect: -6660320881.598357
[2025-11-23 21:02:29] 2025-11-24 02:01:39,952 | INFO     | chi2: 3.739735654576109
[2025-11-23 21:02:29] 2025-11-24 02:01:39,952 | INFO     | current chi2=3.739735654576109 (change=1.301126400602344 %)
[2025-11-23 21:02:29] 2025-11-24 02:01:39,952 | INFO     | left removable region: 20
[2025-11-23 21:02:29] 2025-11-24 02:01:39,953 | INFO     | sum of square deviations: 110982648139.74791
[2025-11-23 21:02:29] 2025-11-24 02:01:39,964 | INFO     | sum of deviations: 778746148314.5879
[2025-11-23 21:02:29] 2025-11-24 02:01:39,964 | INFO     | mean x: 1763927064.1366198
[2025-11-23 21:02:29] 2025-11-24 02:01:39,964 | INFO     | mean y: 2995068.261971831
[2025-11-23 21:02:29] 2025-11-24 02:01:39,964 | INFO     | intersect: -12374177671.16093
[2025-11-23 21:02:29] 2025-11-24 02:01:39,965 | INFO     | chi2: 0.06338549938529464
[2025-11-23 21:02:29] 2025-11-24 02:01:39,965 | INFO     | current memory leak: 7.02 B/s (using 710 data points, chi2=0.06)
[2025-11-23 21:02:29] 2025-11-24 02:01:39,965 | INFO     | could have reported an average CPU frequency of 2171 MHz (28 samples)
[2025-11-23 21:02:29] 2025-11-24 02:01:39,966 | INFO     | ..............................
[2025-11-23 21:02:29] 2025-11-24 02:01:39,966 | INFO     | . Timing measurements:
[2025-11-23 21:02:29] 2025-11-24 02:01:39,966 | INFO     | . get job = 0 s
[2025-11-23 21:02:29] 2025-11-24 02:01:39,966 | INFO     | . initial setup = 2 s
[2025-11-23 21:02:29] 2025-11-24 02:01:39,966 | INFO     | . payload setup = 8 s
[2025-11-23 21:02:29] 2025-11-24 02:01:39,966 | INFO     | . stage-in = 0 s
[2025-11-23 21:02:29] 2025-11-24 02:01:39,966 | INFO     | . payload execution = 45471 s
[2025-11-23 21:02:29] 2025-11-24 02:01:39,967 | INFO     | . stage-out = 3 s
[2025-11-23 21:02:29] 2025-11-24 02:01:39,967 | INFO     | . log creation = 0 s
[2025-11-23 21:02:29] 2025-11-24 02:01:39,967 | INFO     | ..............................
[2025-11-23 21:02:29] 2025-11-24 02:01:40,065 | INFO     | 
[2025-11-23 21:02:29] 2025-11-24 02:01:40,065 | INFO     | job summary report
[2025-11-23 21:02:29] 2025-11-24 02:01:40,065 | INFO     | --------------------------------------------------
[2025-11-23 21:02:29] 2025-11-24 02:01:40,065 | INFO     | PanDA job id: 6895343165
[2025-11-23 21:02:29] 2025-11-24 02:01:40,066 | INFO     | task id: 47556137
[2025-11-23 21:02:29] 2025-11-24 02:01:40,066 | INFO     | errors: (none)
[2025-11-23 21:02:29] 2025-11-24 02:01:40,066 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 21:02:29] 2025-11-24 02:01:40,066 | INFO     | pilot state: finished 
[2025-11-23 21:02:29] 2025-11-24 02:01:40,066 | INFO     | transexitcode: 0
[2025-11-23 21:02:29] 2025-11-24 02:01:40,066 | INFO     | exeerrorcode: 0
[2025-11-23 21:02:29] 2025-11-24 02:01:40,067 | INFO     | exeerrordiag: 
[2025-11-23 21:02:29] 2025-11-24 02:01:40,067 | INFO     | exitcode: 0
[2025-11-23 21:02:29] 2025-11-24 02:01:40,067 | INFO     | exitmsg: OK
[2025-11-23 21:02:29] 2025-11-24 02:01:40,067 | INFO     | cpuconsumptiontime: 350134 s
[2025-11-23 21:02:29] 2025-11-24 02:01:40,067 | INFO     | nevents: 1000
[2025-11-23 21:02:29] 2025-11-24 02:01:40,067 | INFO     | neventsw: 0
[2025-11-23 21:02:29] 2025-11-24 02:01:40,068 | INFO     | pid: 313
[2025-11-23 21:02:29] 2025-11-24 02:01:40,068 | INFO     | pgrp: 313
[2025-11-23 21:02:29] 2025-11-24 02:01:40,068 | INFO     | corecount: 8
[2025-11-23 21:02:29] 2025-11-24 02:01:40,068 | INFO     | event service: False
[2025-11-23 21:02:29] 2025-11-24 02:01:40,068 | INFO     | sizes: {0: 2298705, 1: 2298705, 6: 2298995, 11: 2299023, 45483: 2345142, 45488: 2354348, 45495: 2354538}
[2025-11-23 21:02:29] 2025-11-24 02:01:40,069 | INFO     | --------------------------------------------------
[2025-11-23 21:02:29] 2025-11-24 02:01:40,069 | INFO     | 
[2025-11-23 21:02:29] 2025-11-24 02:01:40,069 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 21:02:29] 2025-11-24 02:01:40,097 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,098 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,098 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,099 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,099 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 21:02:29] 2025-11-24 02:01:40,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 21:02:29] 2025-11-24 02:01:40,101 | INFO     | job 6895343165 has completed (purged errors)
[2025-11-23 21:02:29] 2025-11-24 02:01:40,101 | INFO     | overall cleanup function is called
[2025-11-23 21:02:29] 2025-11-24 02:01:41,117 | INFO     | --- collectZombieJob: --- 10, [313]
[2025-11-23 21:02:29] 2025-11-24 02:01:41,117 | INFO     | zombie collector waiting for pid 313
[2025-11-23 21:02:29] 2025-11-24 02:01:41,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 21:02:29] 2025-11-24 02:01:41,118 | INFO     | collected zombie processes
[2025-11-23 21:02:29] 2025-11-24 02:01:41,118 | INFO     | will attempt to kill all subprocesses of pid=313
[2025-11-23 21:02:29] 2025-11-24 02:01:41,209 | INFO     | process IDs to be killed: [313] (in reverse order)
[2025-11-23 21:02:29] 2025-11-24 02:01:41,265 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 21:02:29] 2025-11-24 02:01:41,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 21:02:29] 2025-11-24 02:01:41,270 | INFO     | did not find any defunct processes belonging to 313
[2025-11-23 21:02:29] 2025-11-24 02:01:41,273 | INFO     | did not find any defunct processes belonging to 313
[2025-11-23 21:02:29] 2025-11-24 02:01:41,275 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 21:02:29] 2025-11-24 02:01:41,275 | INFO     | ready for new job
[2025-11-23 21:02:29] 2025-11-24 02:01:41,276 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 21:02:29] 2025-11-24 02:01:41,279 | INFO     | ***************************************
[2025-11-23 21:02:29] 2025-11-24 02:01:41,280 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 21:02:29] 2025-11-24 02:01:41,280 | INFO     | ***************************************
[2025-11-23 21:02:29] 2025-11-24 02:01:41,280 | INFO     | 
[2025-11-23 21:02:29] 2025-11-24 02:01:41,280 | INFO     | architecture information:
[2025-11-23 21:02:29] 2025-11-24 02:01:41,281 | INFO     | executing command: cat /etc/os-release
[2025-11-23 21:02:29] 2025-11-24 02:01:41,300 | INFO     | cat /etc/os-release:
[2025-11-23 21:02:29] NAME="CentOS Linux"
[2025-11-23 21:02:29] VERSION="7 (Core)"
[2025-11-23 21:02:29] ID="centos"
[2025-11-23 21:02:29] ID_LIKE="rhel fedora"
[2025-11-23 21:02:29] VERSION_ID="7"
[2025-11-23 21:02:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 21:02:29] ANSI_COLOR="0;31"
[2025-11-23 21:02:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 21:02:29] HOME_URL="https://www.centos.org/"
[2025-11-23 21:02:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 21:02:29] 
[2025-11-23 21:02:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 21:02:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 21:02:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 21:02:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 21:02:29] 
[2025-11-23 21:02:29] 2025-11-24 02:01:41,300 | INFO     | ***************************************
[2025-11-23 21:02:29] 2025-11-24 02:01:41,804 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 21:02:29] 2025-11-24 02:01:41,823 | INFO     | sufficient remaining disk space (17466130432 B)
[2025-11-23 21:02:29] 2025-11-24 02:01:41,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 21:02:29] 2025-11-24 02:01:41,824 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 21:02:29] 2025-11-24 02:01:41,824 | INFO     | update_server=False
[2025-11-23 21:02:29] 2025-11-24 02:01:41,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 21:02:29] 2025-11-24 02:01:41,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:02:29] 2025-11-24 02:01:41,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:02:29] 2025-11-24 02:01:41,825 | INFO     | aborting loop
[2025-11-23 21:02:29] 2025-11-24 02:01:42,231 | INFO     | all data control threads have been joined
[2025-11-23 21:02:29] 2025-11-24 02:01:42,821 | INFO     | all payload control threads have been joined
[2025-11-23 21:02:29] 2025-11-24 02:01:42,828 | INFO     | [job] job monitor thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:42,829 | INFO     | [job] queue monitor thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:42,830 | INFO     | [job] retrieve thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:43,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 21:02:29] 2025-11-24 02:01:43,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 21:02:29] 2025-11-24 02:01:43,195 | INFO     | [payload] failed_post thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:43,244 | INFO     | [data] control thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:43,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:43,359 | INFO     | [payload] validate_post thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:43,417 | INFO     | [job] validate thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:43,418 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:43,431 | INFO     | all job control threads have been joined
[2025-11-23 21:02:29] 2025-11-24 02:01:43,756 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:43,827 | INFO     | [payload] control thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:43,864 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:44,190 | INFO     | [data] copytool_in thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:44,437 | INFO     | [job] control thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:45,019 | INFO     | [data] copytool_out thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:01:47,096 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 21:02:29] 2025-11-24 02:02:12,697 | INFO     | PID=25758 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 21:02:29] 2025-11-24 02:02:12,697 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 21:02:29] 2025-11-24 02:02:12,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 21:02:29] 2025-11-24 02:02:12,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 21:02:29] 2025-11-24 02:02:22,568 | INFO     | [monitor] cgroup control has ended
[2025-11-23 21:02:29] 2025-11-24 02:02:24,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140100610012992)>', '<ExcThread(monitor, started 140099702462208)>']
[2025-11-23 21:02:29] 2025-11-24 02:02:24,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 21:02:29] 2025-11-24 02:02:24,751 | INFO     | [monitor] control thread has ended
[2025-11-23 21:02:29] 2025-11-24 02:02:29,093 | INFO     | all workflow threads have been joined
[2025-11-23 21:02:29] 2025-11-24 02:02:29,093 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 21:02:29] 2025-11-24 02:02:29,094 | INFO     | traces error code: 0
[2025-11-23 21:02:29] 2025-11-24 02:02:29,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 21:02:29] 2025-11-24 02:02:29,203 [wrapper] ==== pilot stdout END ====
[2025-11-23 21:02:29] 2025-11-24 02:02:29,208 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 21:02:29] 2025-11-24 02:02:29,212 [wrapper] pilotpid: 25758
[2025-11-23 21:02:29] 2025-11-24 02:02:29,217 [wrapper] Pilot exit status: 0
[2025-11-23 21:02:29] 2025-11-24 02:02:29,233 [wrapper] pandaids: 6895343165
[2025-11-23 21:02:29] 2025-11-24 02:02:29,287 [wrapper] cleanup supervisor_pilot  3223 25759
[2025-11-23 21:02:29] 2025-11-24 02:02:29,291 [wrapper] Test setup, not cleaning
[2025-11-23 21:02:29] 2025-11-24 02:02:29,295 [wrapper] apfmon messages muted
[2025-11-23 21:02:29] 2025-11-24 02:02:29,299 [wrapper] ==== wrapper stdout END ====
[2025-11-23 21:02:29] 2025-11-24 02:02:29,303 [wrapper] ==== wrapper stderr END ====
[2025-11-23 21:02:29]  *** Error codes and diagnostics ***
[2025-11-23 21:02:29]     "exeErrorCode": 0,
[2025-11-23 21:02:29]     "exeErrorDiag": "",
[2025-11-23 21:02:29]     "pilotErrorCode": 0,
[2025-11-23 21:02:29]     "pilotErrorDiag": "",
[2025-11-23 21:02:29]  *** Listing of results directory ***
[2025-11-23 21:02:29] total 1316248
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 10:48 pilot3.tar.gz
[2025-11-23 21:02:29] -rwx------ 1 boincer umatlas     36292 Nov 22 10:52 runpilot2-wrapper.sh
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 10:52 queuedata.json
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas       100 Nov 23 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 21:02:29] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 08:22 run_atlas
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas       105 Nov 23 08:22 job.xml
[2025-11-23 21:02:29] -rw-r--r-- 2 boincer umatlas 411457446 Nov 23 08:22 EVNT.47483658._000417.pool.root.1
[2025-11-23 21:02:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 08:22 start_atlas.sh
[2025-11-23 21:02:29] drwxrwx--x 2 boincer umatlas      4096 Nov 23 08:22 shared
[2025-11-23 21:02:29] -rw-r--r-- 2 boincer umatlas    590093 Nov 23 08:22 input.tar.gz
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas         0 Nov 23 08:22 boinc_lockfile
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 08:22 pandaJob.out
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas        57 Nov 23 08:22 setup.sh.local
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas    989785 Nov 23 08:23 agis_schedconf.cvmfs.json
[2025-11-23 21:02:29] drwx------ 5 boincer umatlas      4096 Nov 23 08:23 pilot3
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas       533 Nov 23 20:48 boinc_task_state.xml
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas      5910 Nov 23 20:56 init_data.xml
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas 915967868 Nov 23 21:00 HITS.47556137._004122.pool.root.1
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas        95 Nov 23 21:01 pilot_heartbeat.json
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas      1064 Nov 23 21:01 memory_monitor_summary.json
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas   1526164 Nov 23 21:01 agis_ddmendpoints.agis.ALL.json
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas   1988393 Nov 23 21:01 log.47556137._004122.job.log.tgz.1
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas      8669 Nov 23 21:01 heartbeat.json
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas        29 Nov 23 21:02 wrapper_checkpoint.txt
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 21:02 boinc_mmap_file
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas      4746 Nov 23 21:02 pilotlog.txt
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas   6251518 Nov 23 21:02 log.47556137._004122.job.log.1
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas       353 Nov 23 21:02 output.list
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas       620 Nov 23 21:02 runtime_log
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas   8263680 Nov 23 21:02 result.tar.gz
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas       667 Nov 23 21:02 sE6NDmu54g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXAIKDmbPO9Gn.diag
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 21:02 runtime_log.err
[2025-11-23 21:02:29] -rw-r--r-- 1 boincer umatlas     21065 Nov 23 21:02 stderr.txt
[2025-11-23 21:02:29] HITS file was successfully produced:
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas 915967868 Nov 23 21:00 shared/HITS.pool.root.1
[2025-11-23 21:02:29]  *** Contents of shared directory: ***
[2025-11-23 21:02:29] total 1304992
[2025-11-23 21:02:29] -rw-r--r-- 2 boincer umatlas 411457446 Nov 23 08:22 ATLAS.root_0
[2025-11-23 21:02:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 08:22 start_atlas.sh
[2025-11-23 21:02:29] -rw-r--r-- 2 boincer umatlas    590093 Nov 23 08:22 input.tar.gz
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas 915967868 Nov 23 21:00 HITS.pool.root.1
[2025-11-23 21:02:29] -rw------- 1 boincer umatlas   8263680 Nov 23 21:02 result.tar.gz
21:02:31 (21960): run_atlas exited; CPU time 346267.838658
21:02:31 (21960): called boinc_finish(0)

</stderr_txt>
]]>

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