Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:51:03 (4736): wrapper (7.7.26015): starting
07:51:03 (4736): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 07:51:03] Arguments: --nthreads 8
[2025-11-23 07:51:03] Threads: 8
[2025-11-23 07:51:03] Checking for CVMFS
[2025-11-23 07:51:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 07:51:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 07:51:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 07:51:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 07:51:03] 2.11.2.0 2830 52859 81868 153209 2 83 13741170 20275201 1 130560 0 10352834 99.764 3231905 28416 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 07:51:03] CVMFS is ok
[2025-11-23 07:51:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 07:51:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 07:51:04] Further information can be found at the LHC@home message board.
[2025-11-23 07:51:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 07:51:04] Checking for apptainer binary...
[2025-11-23 07:51:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 07:51:04] Running /usr/bin/apptainer --version
[2025-11-23 07:51:04] apptainer version 1.3.2-1.el7
[2025-11-23 07:51:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 07:51:05] c-204-15.aglt2.org
[2025-11-23 07:51:05] apptainer works
[2025-11-23 07:51:05] Set ATHENA_PROC_NUMBER=8
[2025-11-23 07:51:05] Set ATHENA_CORE_NUMBER=8
[2025-11-23 07:51:05] Starting ATLAS job with PandaID=6895342733
[2025-11-23 07:51:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 20:12:55]  *** The last 200 lines of the pilot log: ***
[2025-11-23 20:12:55] 2025-11-24 01:12:22,095 | INFO     | time since job start (44460s) is within the limit (172800.0s)
[2025-11-23 20:12:55] 2025-11-24 01:12:22,440 | INFO     | monitor loop #3261: job 0:6895342733 is in state 'finished'
[2025-11-23 20:12:55] 2025-11-24 01:12:22,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 20:12:55] 2025-11-24 01:12:22,840 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 20:12:55] 2025-11-24 01:12:22,844 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.125
[2025-11-23 20:12:55] 2025-11-24 01:12:22,847 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895342733/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 20:12:55] 2025-11-24 01:12:22,848 | INFO     | extracted standard info from prmon json
[2025-11-23 20:12:55] 2025-11-24 01:12:22,848 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 20:12:55] 2025-11-24 01:12:22,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 20:12:55] 2025-11-24 01:12:22,861 | INFO     | fitting pss+swap vs Time
[2025-11-23 20:12:55] 2025-11-24 01:12:22,862 | INFO     | sum of square deviations: 120132737641.50076
[2025-11-23 20:12:55] 2025-11-24 01:12:22,872 | INFO     | sum of deviations: 685461474487.3793
[2025-11-23 20:12:55] 2025-11-24 01:12:22,873 | INFO     | mean x: 1763924518.6515775
[2025-11-23 20:12:55] 2025-11-24 01:12:22,873 | INFO     | mean y: 3085245.670781893
[2025-11-23 20:12:55] 2025-11-24 01:12:22,873 | INFO     | intersect: -10061634206.969557
[2025-11-23 20:12:55] 2025-11-24 01:12:22,874 | INFO     | chi2: 6.909785530329014
[2025-11-23 20:12:55] 2025-11-24 01:12:22,875 | INFO     | sum of square deviations: 117677934159.36295
[2025-11-23 20:12:55] 2025-11-24 01:12:22,886 | INFO     | sum of deviations: 975924219968.2056
[2025-11-23 20:12:55] 2025-11-24 01:12:22,886 | INFO     | mean x: 1763924366.1560774
[2025-11-23 20:12:55] 2025-11-24 01:12:22,886 | INFO     | mean y: 3103291.635359116
[2025-11-23 20:12:55] 2025-11-24 01:12:22,886 | INFO     | intersect: -14625437933.370628
[2025-11-23 20:12:55] 2025-11-24 01:12:22,887 | INFO     | chi2: 3.115892682351503
[2025-11-23 20:12:55] 2025-11-24 01:12:22,887 | INFO     | current chi2=3.115892682351503 (change=54.90608690132329 %)
[2025-11-23 20:12:55] 2025-11-24 01:12:22,888 | INFO     | sum of square deviations: 115256805727.19571
[2025-11-23 20:12:55] 2025-11-24 01:12:22,898 | INFO     | sum of deviations: 1087177755504.07
[2025-11-23 20:12:55] 2025-11-24 01:12:22,899 | INFO     | mean x: 1763924213.6606398
[2025-11-23 20:12:55] 2025-11-24 01:12:22,899 | INFO     | mean y: 3110289.6314325454
[2025-11-23 20:12:55] 2025-11-24 01:12:22,899 | INFO     | intersect: -16635379345.643616
[2025-11-23 20:12:55] 2025-11-24 01:12:22,900 | INFO     | chi2: 2.3932046765533146
[2025-11-23 20:12:55] 2025-11-24 01:12:22,900 | INFO     | current chi2=2.3932046765533146 (change=23.193610289966404 %)
[2025-11-23 20:12:55] 2025-11-24 01:12:22,900 | INFO     | right removable region: 718
[2025-11-23 20:12:55] 2025-11-24 01:12:22,901 | INFO     | sum of square deviations: 117677644409.36298
[2025-11-23 20:12:55] 2025-11-24 01:12:22,911 | INFO     | sum of deviations: 474559318514.1594
[2025-11-23 20:12:55] 2025-11-24 01:12:22,912 | INFO     | mean x: 1763924671.1560774
[2025-11-23 20:12:55] 2025-11-24 01:12:22,912 | INFO     | mean y: 3098324.5207182323
[2025-11-23 20:12:55] 2025-11-24 01:12:22,912 | INFO     | intersect: -7110290918.232838
[2025-11-23 20:12:55] 2025-11-24 01:12:22,913 | INFO     | chi2: 4.733490182416636
[2025-11-23 20:12:55] 2025-11-24 01:12:22,913 | INFO     | current chi2=4.733490182416636 (change=31.495845107782266 %)
[2025-11-23 20:12:55] 2025-11-24 01:12:22,914 | INFO     | sum of square deviations: 115256226227.19571
[2025-11-23 20:12:55] 2025-11-24 01:12:22,924 | INFO     | sum of deviations: 433971804617.52386
[2025-11-23 20:12:55] 2025-11-24 01:12:22,925 | INFO     | mean x: 1763924823.6606398
[2025-11-23 20:12:55] 2025-11-24 01:12:22,925 | INFO     | mean y: 3100879.42837274
[2025-11-23 20:12:55] 2025-11-24 01:12:22,925 | INFO     | intersect: -6638567549.179526
[2025-11-23 20:12:55] 2025-11-24 01:12:22,926 | INFO     | chi2: 4.6992515874153
[2025-11-23 20:12:55] 2025-11-24 01:12:22,926 | INFO     | current chi2=4.6992515874153 (change=0.7233266296510251 %)
[2025-11-23 20:12:55] 2025-11-24 01:12:22,926 | INFO     | left removable region: 20
[2025-11-23 20:12:55] 2025-11-24 01:12:22,927 | INFO     | sum of square deviations: 105449692886.712
[2025-11-23 20:12:55] 2025-11-24 01:12:22,937 | INFO     | sum of deviations: 795598185243.3622
[2025-11-23 20:12:55] 2025-11-24 01:12:22,937 | INFO     | mean x: 1763924793.1704872
[2025-11-23 20:12:55] 2025-11-24 01:12:22,937 | INFO     | mean y: 3130448.5515759313
[2025-11-23 20:12:55] 2025-11-24 01:12:22,937 | INFO     | intersect: -13305351785.340786
[2025-11-23 20:12:55] 2025-11-24 01:12:22,938 | INFO     | chi2: 0.10212506900999845
[2025-11-23 20:12:55] 2025-11-24 01:12:22,938 | INFO     | current memory leak: 7.54 B/s (using 698 data points, chi2=0.10)
[2025-11-23 20:12:55] 2025-11-24 01:12:22,938 | INFO     | could have reported an average CPU frequency of 2183 MHz (28 samples)
[2025-11-23 20:12:55] 2025-11-24 01:12:22,939 | INFO     | ..............................
[2025-11-23 20:12:55] 2025-11-24 01:12:22,939 | INFO     | . Timing measurements:
[2025-11-23 20:12:55] 2025-11-24 01:12:22,939 | INFO     | . get job = 0 s
[2025-11-23 20:12:55] 2025-11-24 01:12:22,939 | INFO     | . initial setup = 2 s
[2025-11-23 20:12:55] 2025-11-24 01:12:22,939 | INFO     | . payload setup = 9 s
[2025-11-23 20:12:55] 2025-11-24 01:12:22,939 | INFO     | . stage-in = 0 s
[2025-11-23 20:12:55] 2025-11-24 01:12:22,939 | INFO     | . payload execution = 44415 s
[2025-11-23 20:12:55] 2025-11-24 01:12:22,940 | INFO     | . stage-out = 3 s
[2025-11-23 20:12:55] 2025-11-24 01:12:22,940 | INFO     | . log creation = 0 s
[2025-11-23 20:12:55] 2025-11-24 01:12:22,940 | INFO     | ..............................
[2025-11-23 20:12:55] 2025-11-24 01:12:23,212 | INFO     | PID=8469 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 20:12:55] 2025-11-24 01:12:23,423 | INFO     | 
[2025-11-23 20:12:55] 2025-11-24 01:12:23,423 | INFO     | job summary report
[2025-11-23 20:12:55] 2025-11-24 01:12:23,424 | INFO     | --------------------------------------------------
[2025-11-23 20:12:55] 2025-11-24 01:12:23,424 | INFO     | PanDA job id: 6895342733
[2025-11-23 20:12:55] 2025-11-24 01:12:23,424 | INFO     | task id: 47556149
[2025-11-23 20:12:55] 2025-11-24 01:12:23,424 | INFO     | errors: (none)
[2025-11-23 20:12:55] 2025-11-24 01:12:23,424 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 20:12:55] 2025-11-24 01:12:23,424 | INFO     | pilot state: finished 
[2025-11-23 20:12:55] 2025-11-24 01:12:23,425 | INFO     | transexitcode: 0
[2025-11-23 20:12:55] 2025-11-24 01:12:23,425 | INFO     | exeerrorcode: 0
[2025-11-23 20:12:55] 2025-11-24 01:12:23,425 | INFO     | exeerrordiag: 
[2025-11-23 20:12:55] 2025-11-24 01:12:23,425 | INFO     | exitcode: 0
[2025-11-23 20:12:55] 2025-11-24 01:12:23,425 | INFO     | exitmsg: OK
[2025-11-23 20:12:55] 2025-11-24 01:12:23,426 | INFO     | cpuconsumptiontime: 343074 s
[2025-11-23 20:12:55] 2025-11-24 01:12:23,426 | INFO     | nevents: 1000
[2025-11-23 20:12:55] 2025-11-24 01:12:23,426 | INFO     | neventsw: 0
[2025-11-23 20:12:55] 2025-11-24 01:12:23,426 | INFO     | pid: 14895
[2025-11-23 20:12:55] 2025-11-24 01:12:23,426 | INFO     | pgrp: 14895
[2025-11-23 20:12:55] 2025-11-24 01:12:23,426 | INFO     | corecount: 8
[2025-11-23 20:12:55] 2025-11-24 01:12:23,427 | INFO     | event service: False
[2025-11-23 20:12:55] 2025-11-24 01:12:23,427 | INFO     | sizes: {0: 2298804, 1: 2298804, 6: 2299094, 11: 2299122, 44428: 2344851, 44433: 2353845, 44435: 2354029, 44443: 2354275}
[2025-11-23 20:12:55] 2025-11-24 01:12:23,427 | INFO     | --------------------------------------------------
[2025-11-23 20:12:55] 2025-11-24 01:12:23,427 | INFO     | 
[2025-11-23 20:12:55] 2025-11-24 01:12:23,427 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 20:12:55] 2025-11-24 01:12:23,460 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,460 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,461 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 20:12:55] 2025-11-24 01:12:23,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 20:12:55] 2025-11-24 01:12:23,464 | INFO     | job 6895342733 has completed (purged errors)
[2025-11-23 20:12:55] 2025-11-24 01:12:23,465 | INFO     | overall cleanup function is called
[2025-11-23 20:12:55] 2025-11-24 01:12:24,475 | INFO     | --- collectZombieJob: --- 10, [14895]
[2025-11-23 20:12:55] 2025-11-24 01:12:24,475 | INFO     | zombie collector waiting for pid 14895
[2025-11-23 20:12:55] 2025-11-24 01:12:24,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 20:12:55] 2025-11-24 01:12:24,476 | INFO     | collected zombie processes
[2025-11-23 20:12:55] 2025-11-24 01:12:24,476 | INFO     | will attempt to kill all subprocesses of pid=14895
[2025-11-23 20:12:55] 2025-11-24 01:12:24,565 | INFO     | process IDs to be killed: [14895] (in reverse order)
[2025-11-23 20:12:55] 2025-11-24 01:12:24,622 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 20:12:55] 2025-11-24 01:12:24,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 20:12:55] 2025-11-24 01:12:24,627 | INFO     | did not find any defunct processes belonging to 14895
[2025-11-23 20:12:55] 2025-11-24 01:12:24,631 | INFO     | did not find any defunct processes belonging to 14895
[2025-11-23 20:12:55] 2025-11-24 01:12:24,633 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 20:12:55] 2025-11-24 01:12:24,633 | INFO     | ready for new job
[2025-11-23 20:12:55] 2025-11-24 01:12:24,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 20:12:55] 2025-11-24 01:12:24,637 | INFO     | ***************************************
[2025-11-23 20:12:55] 2025-11-24 01:12:24,638 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 20:12:55] 2025-11-24 01:12:24,638 | INFO     | ***************************************
[2025-11-23 20:12:55] 2025-11-24 01:12:24,638 | INFO     | 
[2025-11-23 20:12:55] 2025-11-24 01:12:24,639 | INFO     | architecture information:
[2025-11-23 20:12:55] 2025-11-24 01:12:24,640 | INFO     | executing command: cat /etc/os-release
[2025-11-23 20:12:55] 2025-11-24 01:12:24,657 | INFO     | cat /etc/os-release:
[2025-11-23 20:12:55] NAME="CentOS Linux"
[2025-11-23 20:12:55] VERSION="7 (Core)"
[2025-11-23 20:12:55] ID="centos"
[2025-11-23 20:12:55] ID_LIKE="rhel fedora"
[2025-11-23 20:12:55] VERSION_ID="7"
[2025-11-23 20:12:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 20:12:55] ANSI_COLOR="0;31"
[2025-11-23 20:12:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 20:12:55] HOME_URL="https://www.centos.org/"
[2025-11-23 20:12:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 20:12:55] 
[2025-11-23 20:12:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 20:12:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 20:12:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 20:12:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 20:12:55] 
[2025-11-23 20:12:55] 2025-11-24 01:12:24,657 | INFO     | ***************************************
[2025-11-23 20:12:55] 2025-11-24 01:12:25,160 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 20:12:55] 2025-11-24 01:12:25,181 | INFO     | sufficient remaining disk space (17465081856 B)
[2025-11-23 20:12:55] 2025-11-24 01:12:25,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 20:12:55] 2025-11-24 01:12:25,182 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 20:12:55] 2025-11-24 01:12:25,182 | INFO     | update_server=False
[2025-11-23 20:12:55] 2025-11-24 01:12:25,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 20:12:55] 2025-11-24 01:12:25,359 | INFO     | all payload control threads have been joined
[2025-11-23 20:12:55] 2025-11-24 01:12:25,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 20:12:55] 2025-11-24 01:12:25,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 20:12:55] 2025-11-24 01:12:25,944 | INFO     | all data control threads have been joined
[2025-11-23 20:12:55] 2025-11-24 01:12:25,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:12:55] 2025-11-24 01:12:25,950 | INFO     | aborting loop
[2025-11-23 20:12:55] 2025-11-24 01:12:26,145 | INFO     | all job control threads have been joined
[2025-11-23 20:12:55] 2025-11-24 01:12:26,188 | INFO     | [job] retrieve thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:26,365 | INFO     | [payload] control thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:26,498 | INFO     | [payload] failed_post thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:26,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:26,833 | INFO     | [payload] validate_post thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:26,949 | INFO     | [data] control thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:26,955 | INFO     | [job] job monitor thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:27,033 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:27,151 | INFO     | [job] control thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:27,263 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:27,268 | INFO     | [data] copytool_in thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:27,315 | INFO     | [job] validate thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:27,321 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:27,896 | INFO     | [data] copytool_out thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:28,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:12:55] 2025-11-24 01:12:29,051 | INFO     | [job] queue monitor thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:29,798 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 20:12:55] 2025-11-24 01:12:36,161 | INFO     | [monitor] cgroup control has ended
[2025-11-23 20:12:55] 2025-11-24 01:12:38,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140158860617536)>', '<ExcThread(monitor, started 140158095566592)>']
[2025-11-23 20:12:55] 2025-11-24 01:12:43,276 | INFO     | all workflow threads have been joined
[2025-11-23 20:12:55] 2025-11-24 01:12:43,277 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 20:12:55] 2025-11-24 01:12:43,277 | INFO     | traces error code: 0
[2025-11-23 20:12:55] 2025-11-24 01:12:43,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 20:12:55] 2025-11-24 01:12:55,328 | INFO     | PID=8469 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 20:12:55] 2025-11-24 01:12:55,329 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 20:12:55] 2025-11-24 01:12:55,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 20:12:55] 2025-11-24 01:12:55,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 20:12:55] 2025-11-24 01:12:55,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 20:12:55] 2025-11-24 01:12:55,329 | INFO     | [monitor] control thread has ended
[2025-11-23 20:12:55] 2025-11-24 01:12:55,449 [wrapper] ==== pilot stdout END ====
[2025-11-23 20:12:55] 2025-11-24 01:12:55,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 20:12:55] 2025-11-24 01:12:55,458 [wrapper] pilotpid: 8469
[2025-11-23 20:12:55] 2025-11-24 01:12:55,462 [wrapper] Pilot exit status: 0
[2025-11-23 20:12:55] 2025-11-24 01:12:55,480 [wrapper] pandaids: 6895342733
[2025-11-23 20:12:55] 2025-11-24 01:12:55,524 [wrapper] cleanup supervisor_pilot  6761 8470
[2025-11-23 20:12:55] 2025-11-24 01:12:55,529 [wrapper] Test setup, not cleaning
[2025-11-23 20:12:55] 2025-11-24 01:12:55,535 [wrapper] apfmon messages muted
[2025-11-23 20:12:55] 2025-11-24 01:12:55,541 [wrapper] ==== wrapper stdout END ====
[2025-11-23 20:12:55] 2025-11-24 01:12:55,545 [wrapper] ==== wrapper stderr END ====
[2025-11-23 20:12:55]  *** Error codes and diagnostics ***
[2025-11-23 20:12:55]     "exeErrorCode": 0,
[2025-11-23 20:12:55]     "exeErrorDiag": "",
[2025-11-23 20:12:55]     "pilotErrorCode": 0,
[2025-11-23 20:12:55]     "pilotErrorDiag": "",
[2025-11-23 20:12:55]  *** Listing of results directory ***
[2025-11-23 20:12:55] total 1315216
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 10:04 pilot3.tar.gz
[2025-11-23 20:12:55] -rwx------ 1 boincer umatlas     36292 Nov 22 10:21 runpilot2-wrapper.sh
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 10:21 queuedata.json
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas       100 Nov 23 07:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 20:12:55] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 07:51 run_atlas
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas       105 Nov 23 07:51 job.xml
[2025-11-23 20:12:55] -rw-r--r-- 2 boincer umatlas 411090994 Nov 23 07:51 EVNT.47483658._001096.pool.root.1
[2025-11-23 20:12:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 07:51 start_atlas.sh
[2025-11-23 20:12:55] drwxrwx--x 2 boincer umatlas      4096 Nov 23 07:51 shared
[2025-11-23 20:12:55] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 07:51 input.tar.gz
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas         0 Nov 23 07:51 boinc_lockfile
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 07:51 pandaJob.out
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas        57 Nov 23 07:51 setup.sh.local
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas    989784 Nov 23 07:51 agis_schedconf.cvmfs.json
[2025-11-23 20:12:55] drwx------ 5 boincer umatlas      4096 Nov 23 07:51 pilot3
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas       533 Nov 23 20:00 boinc_task_state.xml
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas      5911 Nov 23 20:09 init_data.xml
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas 915589797 Nov 23 20:11 HITS.47556149._000823.pool.root.1
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas      1076 Nov 23 20:12 memory_monitor_summary.json
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas   1526164 Nov 23 20:12 agis_ddmendpoints.agis.ALL.json
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas   1977724 Nov 23 20:12 log.47556149._000823.job.log.tgz.1
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas      8661 Nov 23 20:12 heartbeat.json
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 20:12 boinc_mmap_file
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas        29 Nov 23 20:12 wrapper_checkpoint.txt
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas        95 Nov 23 20:12 pilot_heartbeat.json
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas       744 Nov 23 20:12 pilotlog.txt
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas   6109490 Nov 23 20:12 log.47556149._000823.job.log.1
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas       353 Nov 23 20:12 output.list
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas       620 Nov 23 20:12 runtime_log
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas   8110080 Nov 23 20:12 result.tar.gz
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 20:12 runtime_log.err
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas       668 Nov 23 20:12 94YNDm7b4g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmt9HKDmuhUsEn.diag
[2025-11-23 20:12:55] -rw-r--r-- 1 boincer umatlas     21409 Nov 23 20:12 stderr.txt
[2025-11-23 20:12:55] HITS file was successfully produced:
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas 915589797 Nov 23 20:11 shared/HITS.pool.root.1
[2025-11-23 20:12:55]  *** Contents of shared directory: ***
[2025-11-23 20:12:55] total 1304116
[2025-11-23 20:12:55] -rw-r--r-- 2 boincer umatlas 411090994 Nov 23 07:51 ATLAS.root_0
[2025-11-23 20:12:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 07:51 start_atlas.sh
[2025-11-23 20:12:55] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 07:51 input.tar.gz
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas 915589797 Nov 23 20:11 HITS.pool.root.1
[2025-11-23 20:12:55] -rw------- 1 boincer umatlas   8110080 Nov 23 20:12 result.tar.gz
20:12:56 (4736): run_atlas exited; CPU time 340932.806788
20:12:56 (4736): called boinc_finish(0)

</stderr_txt>
]]>

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